RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 TSPY4P0CV99 314 aa9.1□□□□□ -0.95
SPIDR-208ENST00000518711 TSPY10P0CW01 314 aa9.1□□□□□ -0.95
SPIDR-208ENST00000518711 CCDC141Q6ZP82 1450 aa9.09□□□□□ -0.95
SPIDR-208ENST00000518711 SCAF11Q99590 1463 aaKnown RBP9.09□□□□□ -0.95
SPIDR-208ENST00000518711 USP21Q9UK80 565 aa9.09□□□□□ -0.95
SPIDR-208ENST00000518711 KCNA6P17658 529 aa9.08□□□□□ -0.96
SPIDR-208ENST00000518711 TIAM1Q13009 1591 aa9.07□□□□□ -0.96
SPIDR-208ENST00000518711 EHBP1L1Q8N3D4 1523 aa9.06□□□□□ -0.96
SPIDR-208ENST00000518711 AHDC1Q5TGY3 1603 aaPredicted RBP9.06□□□□□ -0.96
SPIDR-208ENST00000518711 BAG6P46379 1132 aa9.06□□□□□ -0.96
SPIDR-208ENST00000518711 PPP1R1BQ9UD71 204 aaPredicted RBP9.06□□□□□ -0.96
SPIDR-208ENST00000518711 ARHGEF5Q12774 1597 aa9.06□□□□□ -0.96
SPIDR-208ENST00000518711 ARHGAP31Q2M1Z3 1444 aa9.05□□□□□ -0.96
SPIDR-208ENST00000518711 ARHGAP23Q9P227 1491 aa9.05□□□□□ -0.96
SPIDR-208ENST00000518711 ADAMTS2O95450 1211 aa9.05□□□□□ -0.96
SPIDR-208ENST00000518711 TXNDC2Q86VQ3 553 aa9.05□□□□□ -0.96
SPIDR-208ENST00000518711 EID1Q9Y6B2 187 aa9.05□□□□□ -0.96
SPIDR-208ENST00000518711 SLIT1O75093 1534 aa9.05□□□□□ -0.96
SPIDR-208ENST00000518711 DIP2AQ14689 1571 aa9.04□□□□□ -0.96
SPIDR-208ENST00000518711 NINLQ9Y2I6 1382 aa9.04□□□□□ -0.96
SPIDR-208ENST00000518711 LTKP29376 864 aa9.04□□□□□ -0.96
SPIDR-208ENST00000518711 ABCC3O15438 1527 aa9.04□□□□□ -0.96
SPIDR-208ENST00000518711 ERVK-7P63135 1459 aa9.03□□□□□ -0.96
SPIDR-208ENST00000518711 COL13A1Q5TAT6 717 aaPredicted RBP9.03□□□□□ -0.96
SPIDR-208ENST00000518711 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.03□□□□□ -0.96
SPIDR-208ENST00000518711 PRDM15P57071 1507 aaPredicted RBP9.03□□□□□ -0.96
SPIDR-208ENST00000518711 ATRNO75882 1429 aa9.03□□□□□ -0.96
SPIDR-208ENST00000518711 CAMSAP2Q08AD1 1489 aa9.02□□□□□ -0.96
SPIDR-208ENST00000518711 TNS4Q8IZW8 715 aa9.02□□□□□ -0.97
SPIDR-208ENST00000518711 NCOA2Q15596 1464 aa9.02□□□□□ -0.97
SPIDR-208ENST00000518711 FNBP4Q8N3X1 1017 aaPredicted RBP9.01□□□□□ -0.97
SPIDR-208ENST00000518711 LRRC59Q96AG4 307 aaKnown RBP9.01□□□□□ -0.97
SPIDR-208ENST00000518711 EIF2AK4Q9P2K8 1649 aaKnown RBP9.01□□□□□ -0.97
SPIDR-208ENST00000518711 TMEM2Q9UHN6 1383 aa9□□□□□ -0.97
SPIDR-208ENST00000518711 MAST1Q9Y2H9 1570 aa9□□□□□ -0.97
SPIDR-208ENST00000518711 SETD5Q9C0A6 1442 aa9□□□□□ -0.97
SPIDR-208ENST00000518711 HSPA6P17066 643 aa8.99□□□□□ -0.97
SPIDR-208ENST00000518711 GJD4Q96KN9 370 aaPredicted RBP8.99□□□□□ -0.97
SPIDR-208ENST00000518711 CAMTA1Q9Y6Y1 1673 aa8.99□□□□□ -0.97
SPIDR-208ENST00000518711 UBR1Q8IWV7 1749 aa8.99□□□□□ -0.97
SPIDR-208ENST00000518711 UNC13BO14795 1591 aa8.99□□□□□ -0.97
SPIDR-208ENST00000518711 NCOA3Q9Y6Q9 1424 aa8.98□□□□□ -0.97
SPIDR-208ENST00000518711 KDM5AP29375 1690 aaKnown RBP8.98□□□□□ -0.97
SPIDR-208ENST00000518711 EN1Q05925 392 aaPredicted RBP8.98□□□□□ -0.97
SPIDR-208ENST00000518711 BRINP3Q76B58 766 aa8.98□□□□□ -0.97
SPIDR-208ENST00000518711 SPON1Q9HCB6 807 aa8.98□□□□□ -0.97
SPIDR-208ENST00000518711 NKTRP30414 1462 aaKnown RBP8.97□□□□□ -0.97
SPIDR-208ENST00000518711 DUOX2Q9NRD8 1548 aa8.97□□□□□ -0.97
SPIDR-208ENST00000518711 HDGFP51858 240 aaKnown RBP8.97□□□□□ -0.97
SPIDR-208ENST00000518711 CADPS2Q86UW7 1296 aa8.97□□□□□ -0.97
SPIDR-208ENST00000518711 SLC52A1Q9NWF4 448 aa8.97□□□□□ -0.97
SPIDR-208ENST00000518711 PNPLA6Q8IY17 1366 aa8.97□□□□□ -0.97
SPIDR-208ENST00000518711 MYOM3Q5VTT5 1437 aa8.97□□□□□ -0.97
SPIDR-208ENST00000518711 ERBINQ96RT1 1412 aa8.96□□□□□ -0.98
SPIDR-208ENST00000518711 RALGAPBQ86X10 1494 aa8.96□□□□□ -0.98
SPIDR-208ENST00000518711 MROH1Q8NDA8 1641 aa8.95□□□□□ -0.98
SPIDR-208ENST00000518711 TET3O43151 1660 aa8.95□□□□□ -0.98
SPIDR-208ENST00000518711 ATF3P18847 181 aa8.95□□□□□ -0.98
SPIDR-208ENST00000518711 IDI1Q13907 227 aa8.95□□□□□ -0.98
SPIDR-208ENST00000518711 C14orf37Q86TY3 774 aa8.95□□□□□ -0.98
SPIDR-208ENST00000518711 SLC26A8Q96RN1 970 aa8.95□□□□□ -0.98
SPIDR-208ENST00000518711 STAG3Q9UJ98 1225 aa8.95□□□□□ -0.98
SPIDR-208ENST00000518711 KANK1Q14678 1352 aa8.95□□□□□ -0.98
SPIDR-208ENST00000518711 CFAP65Q6ZU64 1925 aaKnown RBP8.94□□□□□ -0.98
SPIDR-208ENST00000518711 KCNQ2O43526 872 aa8.94□□□□□ -0.98
SPIDR-208ENST00000518711 TBX22Q9Y458 520 aa8.93□□□□□ -0.98
SPIDR-208ENST00000518711 LMTK2Q8IWU2 1503 aa8.93□□□□□ -0.98
SPIDR-208ENST00000518711 CHD4Q14839 1912 aa8.93□□□□□ -0.98
SPIDR-208ENST00000518711 EFCAB6Q5THR3 1501 aa8.92□□□□□ -0.98
SPIDR-208ENST00000518711 KIF15Q9NS87 1388 aa8.92□□□□□ -0.98
SPIDR-208ENST00000518711 C19orf44Q9H6X5 657 aa8.92□□□□□ -0.98
SPIDR-208ENST00000518711 NOS1P29475 1434 aa8.91□□□□□ -0.98
SPIDR-208ENST00000518711 PTCH1Q13635 1447 aa8.9□□□□□ -0.98
SPIDR-208ENST00000518711 PIK3R4Q99570 1358 aa8.9□□□□□ -0.98
SPIDR-208ENST00000518711 UTRNP46939 3433 aa8.9□□□□□ -0.98
SPIDR-208ENST00000518711 FAM83GA6ND36 823 aa8.9□□□□□ -0.98
SPIDR-208ENST00000518711 KRT27Q7Z3Y8 459 aa8.9□□□□□ -0.98
SPIDR-208ENST00000518711 SEPT12Q8IYM1 358 aa8.9□□□□□ -0.98
SPIDR-208ENST00000518711 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.9□□□□□ -0.98
SPIDR-208ENST00000518711 RPRD2Q5VT52 1461 aaKnown RBP8.89□□□□□ -0.99
SPIDR-208ENST00000518711 PLEKHG1Q9ULL1 1385 aa8.89□□□□□ -0.99
SPIDR-208ENST00000518711 SPHKAPQ2M3C7 1700 aa8.89□□□□□ -0.99
SPIDR-208ENST00000518711 EZH2Q15910 746 aaKnown RBP8.89□□□□□ -0.99
SPIDR-208ENST00000518711 PIAS4Q8N2W9 510 aaPredicted RBP8.89□□□□□ -0.99
SPIDR-208ENST00000518711 PIK3C2BO00750 1634 aa8.89□□□□□ -0.99
SPIDR-208ENST00000518711 ABCC5O15440 1437 aa8.88□□□□□ -0.99
SPIDR-208ENST00000518711 CEP152O94986 1710 aa8.88□□□□□ -0.99
SPIDR-208ENST00000518711 RRP7BPQ9NSQ0 103 aa8.88□□□□□ -0.99
SPIDR-208ENST00000518711 VPS8Q8N3P4 1428 aa8.88□□□□□ -0.99
SPIDR-208ENST00000518711 ANKRD30AQ9BXX3 1397 aa8.87□□□□□ -0.99
SPIDR-208ENST00000518711 BRWD3Q6RI45 1802 aa8.87□□□□□ -0.99
SPIDR-208ENST00000518711 ZFYVE9O95405 1425 aa8.87□□□□□ -0.99
SPIDR-208ENST00000518711 ASXL1Q8IXJ9 1541 aa8.86□□□□□ -0.99
SPIDR-208ENST00000518711 DNAJC5GQ8N7S2 189 aa8.86□□□□□ -0.99
SPIDR-208ENST00000518711 DDX17Q92841 729 aaKnown RBP8.86□□□□□ -0.99
SPIDR-208ENST00000518711 WWC3Q9ULE0 1092 aa8.86□□□□□ -0.99
SPIDR-208ENST00000518711 CHD2O14647 1828 aaKnown RBP8.86□□□□□ -0.99
SPIDR-208ENST00000518711 ADGRB3O60242 1522 aa8.85□□□□□ -0.99
SPIDR-208ENST00000518711 NBPF8Q3BBV2 869 aa8.85□□□□□ -0.99
SPIDR-208ENST00000518711 KANK4Q5T7N3 995 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms