RNA–Protein interactions for RNA: ENST00000518646.5

EFCAB13-206, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 5

Gene EFCAB13, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-206ENST00000518646 SH3D19Q5HYK7 790 aa8.76□□□□□ -1.01
EFCAB13-206ENST00000518646 AQRO60306 1485 aaKnown RBP eCLIP8.76□□□□□ -1.01
EFCAB13-206ENST00000518646 ABCC10Q5T3U5 1492 aa8.76□□□□□ -1.01
EFCAB13-206ENST00000518646 HOXB1P14653 301 aaPredicted RBP8.75□□□□□ -1.01
EFCAB13-206ENST00000518646 FECHP22830 423 aa8.75□□□□□ -1.01
EFCAB13-206ENST00000518646 FCHSD2O94868 740 aa8.74□□□□□ -1.01
EFCAB13-206ENST00000518646 RBM25P49756 843 aaKnown RBP8.74□□□□□ -1.01
EFCAB13-206ENST00000518646 FOXD4L5Q5VV16 416 aaPredicted RBP8.74□□□□□ -1.01
EFCAB13-206ENST00000518646 C3orf67Q6ZVT6 689 aa8.74□□□□□ -1.01
EFCAB13-206ENST00000518646 FOXD4L4Q8WXT5 416 aaPredicted RBP8.74□□□□□ -1.01
EFCAB13-206ENST00000518646 TSPOAP1O95153 1857 aa8.72□□□□□ -1.01
EFCAB13-206ENST00000518646 HOXB3P14651 431 aaPredicted RBP8.72□□□□□ -1.01
EFCAB13-206ENST00000518646 IRF5Q13568 498 aa8.72□□□□□ -1.01
EFCAB13-206ENST00000518646 DSG2Q14126 1118 aa8.72□□□□□ -1.01
EFCAB13-206ENST00000518646 ATP1B4Q9UN42 357 aaPredicted RBP8.72□□□□□ -1.01
EFCAB13-206ENST00000518646 IGSF3O75054 1194 aa8.71□□□□□ -1.02
EFCAB13-206ENST00000518646 IRX2Q9BZI1 471 aaPredicted RBP8.71□□□□□ -1.02
EFCAB13-206ENST00000518646 DIP2BQ9P265 1576 aa8.7□□□□□ -1.02
EFCAB13-206ENST00000518646 VARS2Q5ST30 1063 aaKnown RBP8.7□□□□□ -1.02
EFCAB13-206ENST00000518646 FBXW7Q969H0 707 aa8.7□□□□□ -1.02
EFCAB13-206ENST00000518646 ZNF428Q96B54 188 aa8.7□□□□□ -1.02
EFCAB13-206ENST00000518646 REPIN1Q9BWE0 567 aaKnown RBP8.7□□□□□ -1.02
EFCAB13-206ENST00000518646 TOP2BQ02880 1626 aa8.69□□□□□ -1.02
EFCAB13-206ENST00000518646 SKIV2LQ15477 1246 aaKnown RBP8.69□□□□□ -1.02
EFCAB13-206ENST00000518646 OXER1Q8TDS5 423 aa8.69□□□□□ -1.02
EFCAB13-206ENST00000518646 OSBPP22059 807 aa8.68□□□□□ -1.02
EFCAB13-206ENST00000518646 COG6Q9Y2V7 657 aa8.68□□□□□ -1.02
EFCAB13-206ENST00000518646 ZNF330Q9Y3S2 320 aaPredicted RBP8.68□□□□□ -1.02
EFCAB13-206ENST00000518646 ZNF687Q8N1G0 1237 aa8.67□□□□□ -1.02
EFCAB13-206ENST00000518646 CHMP7Q8WUX9 453 aaPredicted RBP8.67□□□□□ -1.02
EFCAB13-206ENST00000518646 CFTRP13569 1480 aa8.66□□□□□ -1.02
EFCAB13-206ENST00000518646 SPDYE5A6NIY4 337 aa8.66□□□□□ -1.02
EFCAB13-206ENST00000518646 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
EFCAB13-206ENST00000518646 MAP3K9P80192 1104 aa8.65□□□□□ -1.02
EFCAB13-206ENST00000518646 PROCA1Q8NCQ7 364 aaPredicted RBP8.65□□□□□ -1.02
EFCAB13-206ENST00000518646 FOXK1P85037 733 aa8.64□□□□□ -1.03
EFCAB13-206ENST00000518646 PDE4CQ08493 712 aa8.64□□□□□ -1.03
EFCAB13-206ENST00000518646 TMC2Q8TDI7 906 aa8.64□□□□□ -1.03
EFCAB13-206ENST00000518646 ACIN1Q9UKV3 1341 aaKnown RBP8.63□□□□□ -1.03
EFCAB13-206ENST00000518646 PATL2C9JE40 543 aaKnown RBP8.63□□□□□ -1.03
EFCAB13-206ENST00000518646 CLCN1P35523 988 aa8.63□□□□□ -1.03
EFCAB13-206ENST00000518646 PDCD7Q8N8D1 485 aaKnown RBP8.63□□□□□ -1.03
EFCAB13-206ENST00000518646 TARBP1Q13395 1621 aaKnown RBP8.62□□□□□ -1.03
EFCAB13-206ENST00000518646 E9PSI1 815 aa8.62□□□□□ -1.03
EFCAB13-206ENST00000518646 PTGDRQ13258 359 aa8.62□□□□□ -1.03
EFCAB13-206ENST00000518646 ANKRD13DQ6ZTN6 518 aa8.62□□□□□ -1.03
EFCAB13-206ENST00000518646 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
EFCAB13-206ENST00000518646 SNAPC4Q5SXM2 1469 aa8.62□□□□□ -1.03
EFCAB13-206ENST00000518646 MAPKBP1O60336 1514 aa8.61□□□□□ -1.03
EFCAB13-206ENST00000518646 PLPP6Q8IY26 295 aa8.61□□□□□ -1.03
EFCAB13-206ENST00000518646 DDX12PQ92771 950 aa8.61□□□□□ -1.03
EFCAB13-206ENST00000518646 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
EFCAB13-206ENST00000518646 GPCPD1Q9NPB8 672 aa8.61□□□□□ -1.03
EFCAB13-206ENST00000518646 PCF11O94913 1555 aaKnown RBP8.61□□□□□ -1.03
EFCAB13-206ENST00000518646 SSTR3P32745 418 aaPredicted RBP8.6□□□□□ -1.03
EFCAB13-206ENST00000518646 MDM2Q00987 491 aaPredicted RBP8.6□□□□□ -1.03
EFCAB13-206ENST00000518646 ZNF710Q8N1W2 664 aa8.6□□□□□ -1.03
EFCAB13-206ENST00000518646 BEGAINQ9BUH8 593 aa8.6□□□□□ -1.03
EFCAB13-206ENST00000518646 SNRKQ9NRH2 765 aa8.6□□□□□ -1.03
EFCAB13-206ENST00000518646 HCSTQ9UBK5 93 aa8.6□□□□□ -1.03
EFCAB13-206ENST00000518646 TOPBP1Q92547 1522 aa8.59□□□□□ -1.03
EFCAB13-206ENST00000518646 L3MBTL3Q96JM7 780 aaPredicted RBP8.59□□□□□ -1.03
EFCAB13-206ENST00000518646 CALR3Q96L12 384 aaKnown RBP8.59□□□□□ -1.03
EFCAB13-206ENST00000518646 MROH2BQ7Z745 1585 aa8.59□□□□□ -1.03
EFCAB13-206ENST00000518646 BANK1Q8NDB2 785 aa8.58□□□□□ -1.04
EFCAB13-206ENST00000518646 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.58□□□□□ -1.04
EFCAB13-206ENST00000518646 KCNA1Q09470 495 aa8.57□□□□□ -1.04
EFCAB13-206ENST00000518646 WWC1Q8IX03 1113 aa8.57□□□□□ -1.04
EFCAB13-206ENST00000518646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.57□□□□□ -1.04
EFCAB13-206ENST00000518646 RFC5P40937 340 aa8.56□□□□□ -1.04
EFCAB13-206ENST00000518646 PRIM1P49642 420 aaKnown RBP8.56□□□□□ -1.04
EFCAB13-206ENST00000518646 UPF1Q92900 1129 aaKnown RBP eCLIP8.56□□□□□ -1.04
EFCAB13-206ENST00000518646 TBC1D12O60347 775 aa8.55□□□□□ -1.04
EFCAB13-206ENST00000518646 CLK2P49760 499 aaKnown RBP8.55□□□□□ -1.04
EFCAB13-206ENST00000518646 MYSM1Q5VVJ2 828 aa8.55□□□□□ -1.04
EFCAB13-206ENST00000518646 MAGI1Q96QZ7 1491 aaPredicted RBP8.54□□□□□ -1.04
EFCAB13-206ENST00000518646 COL17A1Q9UMD9 1497 aaPredicted RBP8.54□□□□□ -1.04
EFCAB13-206ENST00000518646 RGS20O76081 388 aa8.54□□□□□ -1.04
EFCAB13-206ENST00000518646 BRD1O95696 1058 aa8.54□□□□□ -1.04
EFCAB13-206ENST00000518646 MICALL2Q8IY33 904 aa8.54□□□□□ -1.04
EFCAB13-206ENST00000518646 GDPD2Q9HCC8 539 aa8.54□□□□□ -1.04
EFCAB13-206ENST00000518646 GLMNQ92990 594 aa8.53□□□□□ -1.04
EFCAB13-206ENST00000518646 CEP170Q5SW79 1584 aa8.52□□□□□ -1.04
EFCAB13-206ENST00000518646 PTPRMP28827 1452 aa8.52□□□□□ -1.05
EFCAB13-206ENST00000518646 PHOX2BQ99453 314 aa8.52□□□□□ -1.05
EFCAB13-206ENST00000518646 FAM217BQ9NTX9 383 aaPredicted RBP8.52□□□□□ -1.05
EFCAB13-206ENST00000518646 TDRD9Q8NDG6 1382 aaKnown RBP8.51□□□□□ -1.05
EFCAB13-206ENST00000518646 PPRC1Q5VV67 1664 aaKnown RBP8.51□□□□□ -1.05
EFCAB13-206ENST00000518646 C2orf72A6NCS6 295 aa8.51□□□□□ -1.05
EFCAB13-206ENST00000518646 ABL2P42684 1182 aa8.51□□□□□ -1.05
EFCAB13-206ENST00000518646 TMEM259Q4ZIN3 620 aa8.51□□□□□ -1.05
EFCAB13-206ENST00000518646 PBXIP1Q96AQ6 731 aa8.51□□□□□ -1.05
EFCAB13-206ENST00000518646 USTQ9Y2C2 406 aa8.51□□□□□ -1.05
EFCAB13-206ENST00000518646 ABCC8Q09428 1581 aa8.51□□□□□ -1.05
EFCAB13-206ENST00000518646 SRCAPQ6ZRS2 3230 aa8.5□□□□□ -1.05
EFCAB13-206ENST00000518646 POM121CA8CG34 1229 aa8.5□□□□□ -1.05
EFCAB13-206ENST00000518646 HSPA2P54652 639 aa8.5□□□□□ -1.05
EFCAB13-206ENST00000518646 MED1Q15648 1581 aaPredicted RBP8.5□□□□□ -1.05
EFCAB13-206ENST00000518646 DPY19L2Q6NUT2 758 aa8.5□□□□□ -1.05
EFCAB13-206ENST00000518646 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms