RNA–Protein interactions for RNA: ENST00000518542.1

CSGALNACT1-206, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-206ENST00000518542 PKD2Q13563 968 aa11.34□□□□□ -0.59
CSGALNACT1-206ENST00000518542 MPHOSPH9Q99550 1183 aa11.34□□□□□ -0.59
CSGALNACT1-206ENST00000518542 SPHKAPQ2M3C7 1700 aa11.32□□□□□ -0.6
CSGALNACT1-206ENST00000518542 MYO3AQ8NEV4 1616 aa11.32□□□□□ -0.6
CSGALNACT1-206ENST00000518542 NOS1P29475 1434 aa11.32□□□□□ -0.6
CSGALNACT1-206ENST00000518542 NLRP1Q9C000 1473 aa11.32□□□□□ -0.6
CSGALNACT1-206ENST00000518542 SLC52A1Q9NWF4 448 aa11.31□□□□□ -0.6
CSGALNACT1-206ENST00000518542 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
CSGALNACT1-206ENST00000518542 SYNMO15061 1565 aa11.29□□□□□ -0.6
CSGALNACT1-206ENST00000518542 CEP170BQ9Y4F5 1589 aaPredicted RBP11.29□□□□□ -0.6
CSGALNACT1-206ENST00000518542 STAG3Q9UJ98 1225 aa11.29□□□□□ -0.6
CSGALNACT1-206ENST00000518542 A2ML1A8K2U0 1454 aa11.29□□□□□ -0.6
CSGALNACT1-206ENST00000518542 IDI1Q13907 227 aa11.28□□□□□ -0.6
CSGALNACT1-206ENST00000518542 UGGT1Q9NYU2 1555 aa11.28□□□□□ -0.6
CSGALNACT1-206ENST00000518542 TRPM2O94759 1503 aa11.27□□□□□ -0.61
CSGALNACT1-206ENST00000518542 THEMISQ8N1K5 641 aaPredicted RBP11.27□□□□□ -0.61
CSGALNACT1-206ENST00000518542 PIK3C2BO00750 1634 aa11.27□□□□□ -0.61
CSGALNACT1-206ENST00000518542 KDM5AP29375 1690 aaKnown RBP11.27□□□□□ -0.61
CSGALNACT1-206ENST00000518542 UBR1Q8IWV7 1749 aa11.26□□□□□ -0.61
CSGALNACT1-206ENST00000518542 KIF1BO60333 1816 aa11.25□□□□□ -0.61
CSGALNACT1-206ENST00000518542 CHGAP10645 457 aaKnown RBP11.25□□□□□ -0.61
CSGALNACT1-206ENST00000518542 ZNF335Q9H4Z2 1342 aaPredicted RBP11.24□□□□□ -0.61
CSGALNACT1-206ENST00000518542 CCDC144AA2RUR9 1427 aa11.24□□□□□ -0.61
CSGALNACT1-206ENST00000518542 PLA2R1Q13018 1463 aa11.24□□□□□ -0.61
CSGALNACT1-206ENST00000518542 ADGRB3O60242 1522 aa11.24□□□□□ -0.61
CSGALNACT1-206ENST00000518542 CLTCL1P53675 1640 aa11.24□□□□□ -0.61
CSGALNACT1-206ENST00000518542 MYO5BQ9ULV0 1848 aa11.23□□□□□ -0.61
CSGALNACT1-206ENST00000518542 NCKAP5LQ9HCH0 1330 aa11.23□□□□□ -0.61
CSGALNACT1-206ENST00000518542 TMEM131LA2VDJ0 1609 aa11.22□□□□□ -0.61
CSGALNACT1-206ENST00000518542 MKRN4PQ13434 485 aaPredicted RBP11.22□□□□□ -0.61
CSGALNACT1-206ENST00000518542 DHX57Q6P158 1386 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT1-206ENST00000518542 ANKRD30BQ9BXX2 1392 aa11.21□□□□□ -0.61
CSGALNACT1-206ENST00000518542 HDGFP51858 240 aaKnown RBP11.21□□□□□ -0.61
CSGALNACT1-206ENST00000518542 ANKLE2Q86XL3 938 aa11.21□□□□□ -0.61
CSGALNACT1-206ENST00000518542 ZBTB12Q9Y330 459 aaPredicted RBP11.21□□□□□ -0.61
CSGALNACT1-206ENST00000518542 EID1Q9Y6B2 187 aa11.21□□□□□ -0.61
CSGALNACT1-206ENST00000518542 ZNF326Q5BKZ1 582 aaKnown RBP11.2□□□□□ -0.62
CSGALNACT1-206ENST00000518542 POLR1AO95602 1720 aaPredicted RBP11.2□□□□□ -0.62
CSGALNACT1-206ENST00000518542 TMEM2Q9UHN6 1383 aa11.19□□□□□ -0.62
CSGALNACT1-206ENST00000518542 UBAP1LF5GYI3 381 aa11.19□□□□□ -0.62
CSGALNACT1-206ENST00000518542 MED1Q15648 1581 aaPredicted RBP11.19□□□□□ -0.62
CSGALNACT1-206ENST00000518542 SLIT1O75093 1534 aa11.19□□□□□ -0.62
CSGALNACT1-206ENST00000518542 TXNDC2Q86VQ3 553 aa11.18□□□□□ -0.62
CSGALNACT1-206ENST00000518542 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
CSGALNACT1-206ENST00000518542 ARHGAP23Q9P227 1491 aa11.18□□□□□ -0.62
CSGALNACT1-206ENST00000518542 RIMS2Q9UQ26 1411 aa11.17□□□□□ -0.62
CSGALNACT1-206ENST00000518542 NEURL4Q96JN8 1562 aa11.16□□□□□ -0.62
CSGALNACT1-206ENST00000518542 RPGRIP1LQ68CZ1 1315 aa11.16□□□□□ -0.62
CSGALNACT1-206ENST00000518542 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
CSGALNACT1-206ENST00000518542 RGL3Q3MIN7 710 aa11.16□□□□□ -0.62
CSGALNACT1-206ENST00000518542 SCAF11Q99590 1463 aaKnown RBP11.16□□□□□ -0.62
CSGALNACT1-206ENST00000518542 LTKP29376 864 aa11.15□□□□□ -0.62
CSGALNACT1-206ENST00000518542 ALKQ9UM73 1620 aa11.15□□□□□ -0.62
CSGALNACT1-206ENST00000518542 SPATA31E1Q6ZUB1 1445 aa11.15□□□□□ -0.62
CSGALNACT1-206ENST00000518542 VGFO15240 615 aaPredicted RBP11.14□□□□□ -0.63
CSGALNACT1-206ENST00000518542 BCANQ96GW7 911 aa11.14□□□□□ -0.63
CSGALNACT1-206ENST00000518542 ZFYVE9O95405 1425 aa11.14□□□□□ -0.63
CSGALNACT1-206ENST00000518542 IQGAP1P46940 1657 aa11.14□□□□□ -0.63
CSGALNACT1-206ENST00000518542 PPLO60437 1756 aa11.13□□□□□ -0.63
CSGALNACT1-206ENST00000518542 MED14O60244 1454 aa11.13□□□□□ -0.63
CSGALNACT1-206ENST00000518542 NPHP4O75161 1426 aaPredicted RBP11.13□□□□□ -0.63
CSGALNACT1-206ENST00000518542 NUTM2DQ5VT03 806 aaPredicted RBP11.13□□□□□ -0.63
CSGALNACT1-206ENST00000518542 CCER1Q8TC90 406 aaPredicted RBP11.13□□□□□ -0.63
CSGALNACT1-206ENST00000518542 CLSPNQ9HAW4 1339 aa11.12□□□□□ -0.63
CSGALNACT1-206ENST00000518542 HSPA1LP34931 641 aa11.12□□□□□ -0.63
CSGALNACT1-206ENST00000518542 NEUROD1Q13562 356 aa11.12□□□□□ -0.63
CSGALNACT1-206ENST00000518542 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
CSGALNACT1-206ENST00000518542 NEXMIFQ5QGS0 1516 aa11.12□□□□□ -0.63
CSGALNACT1-206ENST00000518542 IFT172Q9UG01 1749 aa11.12□□□□□ -0.63
CSGALNACT1-206ENST00000518542 CPS1P31327 1500 aa11.11□□□□□ -0.63
CSGALNACT1-206ENST00000518542 STAC3Q96MF2 364 aa11.11□□□□□ -0.63
CSGALNACT1-206ENST00000518542 PLEKHG1Q9ULL1 1385 aa11.11□□□□□ -0.63
CSGALNACT1-206ENST00000518542 STRCP1A6NGW2 1772 aa11.1□□□□□ -0.63
CSGALNACT1-206ENST00000518542 FKBP8Q14318 412 aa11.09□□□□□ -0.63
CSGALNACT1-206ENST00000518542 DCAF11Q8TEB1 546 aa11.09□□□□□ -0.63
CSGALNACT1-206ENST00000518542 KDM2AQ9Y2K7 1162 aa11.08□□□□□ -0.64
CSGALNACT1-206ENST00000518542 PIP4K2BP78356 416 aa11.07□□□□□ -0.64
CSGALNACT1-206ENST00000518542 SLC26A8Q96RN1 970 aa11.07□□□□□ -0.64
CSGALNACT1-206ENST00000518542 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
CSGALNACT1-206ENST00000518542 SETBP1Q9Y6X0 1596 aa11.07□□□□□ -0.64
CSGALNACT1-206ENST00000518542 MYOM2P54296 1465 aa11.06□□□□□ -0.64
CSGALNACT1-206ENST00000518542 TONSLQ96HA7 1378 aa11.06□□□□□ -0.64
CSGALNACT1-206ENST00000518542 TBX22Q9Y458 520 aa11.06□□□□□ -0.64
CSGALNACT1-206ENST00000518542 ADGRF5Q8IZF2 1346 aa11.06□□□□□ -0.64
CSGALNACT1-206ENST00000518542 TOM1O60784 492 aa11.05□□□□□ -0.64
CSGALNACT1-206ENST00000518542 L3MBTL2Q969R5 705 aa11.05□□□□□ -0.64
CSGALNACT1-206ENST00000518542 ADAMTS13Q76LX8 1427 aa11.04□□□□□ -0.64
CSGALNACT1-206ENST00000518542 NRXN3Q9Y4C0 1643 aa11.04□□□□□ -0.64
CSGALNACT1-206ENST00000518542 PIK3C2GO75747 1445 aa11.03□□□□□ -0.64
CSGALNACT1-206ENST00000518542 LAMC1P11047 1609 aa11.03□□□□□ -0.64
CSGALNACT1-206ENST00000518542 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
CSGALNACT1-206ENST00000518542 NRXN1Q9ULB1 1477 aa11.03□□□□□ -0.64
CSGALNACT1-206ENST00000518542 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
CSGALNACT1-206ENST00000518542 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.64
CSGALNACT1-206ENST00000518542 XIRP1Q702N8 1843 aaKnown RBP11.02□□□□□ -0.64
CSGALNACT1-206ENST00000518542 LRRC7Q96NW7 1537 aa11.01□□□□□ -0.65
CSGALNACT1-206ENST00000518542 KCNA6P17658 529 aa11.01□□□□□ -0.65
CSGALNACT1-206ENST00000518542 C14orf93Q9H972 538 aaKnown RBP11.01□□□□□ -0.65
CSGALNACT1-206ENST00000518542 SETD1AO15047 1707 aaKnown RBP11.01□□□□□ -0.65
CSGALNACT1-206ENST00000518542 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms