RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.99□□□□□ -0.17
PVT1-207ENST00000518528 C19orf44Q9H6X5 657 aa13.99□□□□□ -0.17
PVT1-207ENST00000518528 PLEKHG1Q9ULL1 1385 aa13.98□□□□□ -0.17
PVT1-207ENST00000518528 CFAP65Q6ZU64 1925 aaKnown RBP13.98□□□□□ -0.17
PVT1-207ENST00000518528 FOXD1Q16676 465 aa13.98□□□□□ -0.17
PVT1-207ENST00000518528 TBX22Q9Y458 520 aa13.98□□□□□ -0.17
PVT1-207ENST00000518528 PHLPP1O60346 1717 aa13.98□□□□□ -0.17
PVT1-207ENST00000518528 ANKRD30AQ9BXX3 1397 aa13.97□□□□□ -0.17
PVT1-207ENST00000518528 NUTM2BA6NNL0 878 aaPredicted RBP13.97□□□□□ -0.17
PVT1-207ENST00000518528 NUTM2EB1AL46 878 aaPredicted RBP13.97□□□□□ -0.17
PVT1-207ENST00000518528 NUTM2AQ8IVF1 878 aaPredicted RBP13.97□□□□□ -0.17
PVT1-207ENST00000518528 ABCC5O15440 1437 aa13.97□□□□□ -0.17
PVT1-207ENST00000518528 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
PVT1-207ENST00000518528 LMTK2Q8IWU2 1503 aa13.96□□□□□ -0.17
PVT1-207ENST00000518528 SETD1AO15047 1707 aaKnown RBP13.96□□□□□ -0.17
PVT1-207ENST00000518528 KDM5AP29375 1690 aaKnown RBP13.96□□□□□ -0.17
PVT1-207ENST00000518528 KANK4Q5T7N3 995 aaPredicted RBP13.96□□□□□ -0.17
PVT1-207ENST00000518528 NOS1P29475 1434 aa13.96□□□□□ -0.18
PVT1-207ENST00000518528 VPS8Q8N3P4 1428 aa13.96□□□□□ -0.18
PVT1-207ENST00000518528 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
PVT1-207ENST00000518528 APLP2Q06481 763 aa13.95□□□□□ -0.18
PVT1-207ENST00000518528 ADGRB3O60242 1522 aa13.95□□□□□ -0.18
PVT1-207ENST00000518528 LRP6O75581 1613 aa13.94□□□□□ -0.18
PVT1-207ENST00000518528 RIMS2Q9UQ26 1411 aa13.94□□□□□ -0.18
PVT1-207ENST00000518528 CHIC2Q9UKJ5 165 aa13.93□□□□□ -0.18
PVT1-207ENST00000518528 AFF2P51816 1311 aa13.92□□□□□ -0.18
PVT1-207ENST00000518528 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
PVT1-207ENST00000518528 COL16A1Q07092 1604 aaPredicted RBP13.92□□□□□ -0.18
PVT1-207ENST00000518528 PIK3R4Q99570 1358 aa13.92□□□□□ -0.18
PVT1-207ENST00000518528 DAPK1P53355 1430 aa13.91□□□□□ -0.18
PVT1-207ENST00000518528 RBM6P78332 1123 aaKnown RBP13.91□□□□□ -0.18
PVT1-207ENST00000518528 BRINP3Q76B58 766 aa13.91□□□□□ -0.18
PVT1-207ENST00000518528 ZFYVE9O95405 1425 aa13.9□□□□□ -0.18
PVT1-207ENST00000518528 NUTM2DQ5VT03 806 aaPredicted RBP13.9□□□□□ -0.18
PVT1-207ENST00000518528 LRRC59Q96AG4 307 aaKnown RBP13.9□□□□□ -0.18
PVT1-207ENST00000518528 QTRT2Q9H974 415 aaKnown RBP13.9□□□□□ -0.18
PVT1-207ENST00000518528 RPRD2Q5VT52 1461 aaKnown RBP13.9□□□□□ -0.18
PVT1-207ENST00000518528 NGLY1Q96IV0 654 aa13.89□□□□□ -0.19
PVT1-207ENST00000518528 AHDC1Q5TGY3 1603 aaPredicted RBP13.89□□□□□ -0.19
PVT1-207ENST00000518528 C8orf37Q96NL8 207 aa13.88□□□□□ -0.19
PVT1-207ENST00000518528 AMOTL2Q9Y2J4 779 aa13.88□□□□□ -0.19
PVT1-207ENST00000518528 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
PVT1-207ENST00000518528 DCCP43146 1447 aa13.85□□□□□ -0.19
PVT1-207ENST00000518528 SETD5Q9C0A6 1442 aa13.85□□□□□ -0.19
PVT1-207ENST00000518528 ATAD2Q6PL18 1390 aa13.84□□□□□ -0.19
PVT1-207ENST00000518528 SHPRHQ149N8 1683 aa13.84□□□□□ -0.19
PVT1-207ENST00000518528 PTPN23Q9H3S7 1636 aa13.83□□□□□ -0.2
PVT1-207ENST00000518528 ADAMTS13Q76LX8 1427 aa13.83□□□□□ -0.2
PVT1-207ENST00000518528 DIP2AQ14689 1571 aa13.83□□□□□ -0.2
PVT1-207ENST00000518528 RGS12O14924 1447 aa13.82□□□□□ -0.2
PVT1-207ENST00000518528 ANKRD50Q9ULJ7 1429 aa13.82□□□□□ -0.2
PVT1-207ENST00000518528 CHD2O14647 1828 aaKnown RBP13.82□□□□□ -0.2
PVT1-207ENST00000518528 CROCC2H7BZ55 1655 aa13.8□□□□□ -0.2
PVT1-207ENST00000518528 ADAMTS2O95450 1211 aa13.8□□□□□ -0.2
PVT1-207ENST00000518528 FAM50AQ14320 339 aaKnown RBP13.8□□□□□ -0.2
PVT1-207ENST00000518528 TRPM2O94759 1503 aa13.8□□□□□ -0.2
PVT1-207ENST00000518528 ASXL1Q8IXJ9 1541 aa13.8□□□□□ -0.2
PVT1-207ENST00000518528 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.79□□□□□ -0.2
PVT1-207ENST00000518528 TRPC5Q9UL62 973 aaPredicted RBP13.79□□□□□ -0.2
PVT1-207ENST00000518528 PNPLA6Q8IY17 1366 aa13.79□□□□□ -0.2
PVT1-207ENST00000518528 ADGRL2O95490 1459 aa13.79□□□□□ -0.2
PVT1-207ENST00000518528 CCDC125Q86Z20 511 aa13.78□□□□□ -0.2
PVT1-207ENST00000518528 USP21Q9UK80 565 aa13.78□□□□□ -0.2
PVT1-207ENST00000518528 TMEM131LA2VDJ0 1609 aa13.77□□□□□ -0.21
PVT1-207ENST00000518528 MST1RQ04912 1400 aa13.77□□□□□ -0.21
PVT1-207ENST00000518528 PTPRUQ92729 1446 aa13.76□□□□□ -0.21
PVT1-207ENST00000518528 LOC105371045A0A1W2PR82 267 aa13.76□□□□□ -0.21
PVT1-207ENST00000518528 ZNF326Q5BKZ1 582 aaKnown RBP13.75□□□□□ -0.21
PVT1-207ENST00000518528 DDX17Q92841 729 aaKnown RBP13.75□□□□□ -0.21
PVT1-207ENST00000518528 SRCAPQ6ZRS2 3230 aa13.73□□□□□ -0.21
PVT1-207ENST00000518528 FNBP4Q8N3X1 1017 aaPredicted RBP13.73□□□□□ -0.21
PVT1-207ENST00000518528 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
PVT1-207ENST00000518528 GCC2Q8IWJ2 1684 aa13.72□□□□□ -0.21
PVT1-207ENST00000518528 PTCH1Q13635 1447 aa13.71□□□□□ -0.22
PVT1-207ENST00000518528 NUP155O75694 1391 aa13.71□□□□□ -0.22
PVT1-207ENST00000518528 METP08581 1390 aa13.7□□□□□ -0.22
PVT1-207ENST00000518528 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
PVT1-207ENST00000518528 C1orf167Q5SNV9 1468 aa13.68□□□□□ -0.22
PVT1-207ENST00000518528 ATRNO75882 1429 aa13.67□□□□□ -0.22
PVT1-207ENST00000518528 SF3B2Q13435 895 aaKnown RBP13.67□□□□□ -0.22
PVT1-207ENST00000518528 NHSL1Q5SYE7 1610 aa13.67□□□□□ -0.22
PVT1-207ENST00000518528 MYO5BQ9ULV0 1848 aa13.67□□□□□ -0.22
PVT1-207ENST00000518528 UNC13BO14795 1591 aa13.66□□□□□ -0.22
PVT1-207ENST00000518528 SETBP1Q9Y6X0 1596 aa13.66□□□□□ -0.22
PVT1-207ENST00000518528 ORAI2Q96SN7 254 aa13.66□□□□□ -0.22
PVT1-207ENST00000518528 GJD4Q96KN9 370 aaPredicted RBP13.65□□□□□ -0.22
PVT1-207ENST00000518528 ROCK1Q13464 1354 aa13.65□□□□□ -0.22
PVT1-207ENST00000518528 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
PVT1-207ENST00000518528 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
PVT1-207ENST00000518528 VGFO15240 615 aaPredicted RBP13.63□□□□□ -0.23
PVT1-207ENST00000518528 BLMP54132 1417 aaPredicted RBP13.62□□□□□ -0.23
PVT1-207ENST00000518528 LRPPRCP42704 1394 aaKnown RBP13.61□□□□□ -0.23
PVT1-207ENST00000518528 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
PVT1-207ENST00000518528 E9PCH4 1651 aa13.6□□□□□ -0.23
PVT1-207ENST00000518528 UNC5CLQ8IV45 518 aa13.6□□□□□ -0.23
PVT1-207ENST00000518528 IQGAP3Q86VI3 1631 aa13.59□□□□□ -0.23
PVT1-207ENST00000518528 MYOM2P54296 1465 aa13.59□□□□□ -0.23
PVT1-207ENST00000518528 BCL9LQ86UU0 1499 aa13.59□□□□□ -0.23
PVT1-207ENST00000518528 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.23
PVT1-207ENST00000518528 HFM1A2PYH4 1435 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms