RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 SLC19A1P41440 591 aa10.67□□□□□ -0.7
SMN1-210ENST00000518504 TRIM67Q6ZTA4 783 aa10.67□□□□□ -0.7
SMN1-210ENST00000518504 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
SMN1-210ENST00000518504 DNAJB2P25686 324 aa10.65□□□□□ -0.7
SMN1-210ENST00000518504 PTGDRQ13258 359 aa10.65□□□□□ -0.7
SMN1-210ENST00000518504 PRR14Q9BWN1 585 aa10.65□□□□□ -0.7
SMN1-210ENST00000518504 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
SMN1-210ENST00000518504 S1PR4O95977 384 aa10.63□□□□□ -0.71
SMN1-210ENST00000518504 RBM46Q8TBY0 533 aaKnown RBP10.63□□□□□ -0.71
SMN1-210ENST00000518504 KCNV2Q8TDN2 545 aa10.63□□□□□ -0.71
SMN1-210ENST00000518504 ADGRG1Q9Y653 693 aa10.63□□□□□ -0.71
SMN1-210ENST00000518504 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
SMN1-210ENST00000518504 ZNF775Q96BV0 537 aaPredicted RBP10.62□□□□□ -0.71
SMN1-210ENST00000518504 TMEM134Q9H6X4 195 aa10.62□□□□□ -0.71
SMN1-210ENST00000518504 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
SMN1-210ENST00000518504 RCCD1A6NED2 376 aa10.61□□□□□ -0.71
SMN1-210ENST00000518504 CFHP08603 1231 aa10.61□□□□□ -0.71
SMN1-210ENST00000518504 ARHGEF1Q92888 912 aaKnown RBP10.61□□□□□ -0.71
SMN1-210ENST00000518504 PKDCCQ504Y2 493 aa10.6□□□□□ -0.71
SMN1-210ENST00000518504 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
SMN1-210ENST00000518504 LIAT1Q6ZQX7 453 aa10.6□□□□□ -0.71
SMN1-210ENST00000518504 ACTN4O43707 911 aaKnown RBP10.59□□□□□ -0.71
SMN1-210ENST00000518504 KMT5BQ4FZB7 885 aa10.59□□□□□ -0.71
SMN1-210ENST00000518504 SLC10A3P09131 477 aa10.58□□□□□ -0.72
SMN1-210ENST00000518504 ZNF598Q86UK7 904 aaKnown RBP10.58□□□□□ -0.72
SMN1-210ENST00000518504 ANKLE1Q8NAG6 615 aa10.58□□□□□ -0.72
SMN1-210ENST00000518504 TNFRSF10AO00220 468 aa10.57□□□□□ -0.72
SMN1-210ENST00000518504 MYT1Q01538 1121 aa10.57□□□□□ -0.72
SMN1-210ENST00000518504 POTECB2RU33 542 aa10.56□□□□□ -0.72
SMN1-210ENST00000518504 ZNF697Q5TEC3 545 aa10.56□□□□□ -0.72
SMN1-210ENST00000518504 FAM187AA6NFU0 413 aa10.54□□□□□ -0.72
SMN1-210ENST00000518504 ADH1BP00325 375 aa10.54□□□□□ -0.72
SMN1-210ENST00000518504 PLA2G2CQ5R387 149 aa10.54□□□□□ -0.72
SMN1-210ENST00000518504 PUS10Q3MIT2 529 aaKnown RBP10.53□□□□□ -0.72
SMN1-210ENST00000518504 DGAT1O75907 488 aa10.52□□□□□ -0.73
SMN1-210ENST00000518504 SLC6A16Q9GZN6 736 aa10.52□□□□□ -0.73
SMN1-210ENST00000518504 NR1I2O75469 434 aa10.51□□□□□ -0.73
SMN1-210ENST00000518504 PRR20EP86478 221 aa10.51□□□□□ -0.73
SMN1-210ENST00000518504 PRR20CP86479 221 aa10.51□□□□□ -0.73
SMN1-210ENST00000518504 PRR20DP86480 221 aa10.51□□□□□ -0.73
SMN1-210ENST00000518504 PRR20BP86481 221 aa10.51□□□□□ -0.73
SMN1-210ENST00000518504 PRR20AP86496 221 aa10.51□□□□□ -0.73
SMN1-210ENST00000518504 GDF9O60383 454 aa10.5□□□□□ -0.73
SMN1-210ENST00000518504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.49□□□□□ -0.73
SMN1-210ENST00000518504 SEMA3EO15041 775 aa10.49□□□□□ -0.73
SMN1-210ENST00000518504 FCHSD2O94868 740 aa10.49□□□□□ -0.73
SMN1-210ENST00000518504 SCUBE3Q8IX30 993 aa10.49□□□□□ -0.73
SMN1-210ENST00000518504 ST8SIA5O15466 376 aa10.48□□□□□ -0.73
SMN1-210ENST00000518504 PXYLP1Q8TE99 480 aa10.48□□□□□ -0.73
SMN1-210ENST00000518504 FOXC1Q12948 553 aa10.47□□□□□ -0.73
SMN1-210ENST00000518504 SPSB2Q99619 263 aa10.45□□□□□ -0.74
SMN1-210ENST00000518504 OATP04181 439 aa10.43□□□□□ -0.74
SMN1-210ENST00000518504 FECHP22830 423 aa10.42□□□□□ -0.74
SMN1-210ENST00000518504 METTL3Q86U44 580 aaKnown RBP10.42□□□□□ -0.74
SMN1-210ENST00000518504 NLRP7Q8WX94 980 aa10.42□□□□□ -0.74
SMN1-210ENST00000518504 AAASQ9NRG9 546 aa10.42□□□□□ -0.74
SMN1-210ENST00000518504 PKD2L1Q9P0L9 805 aa10.42□□□□□ -0.74
SMN1-210ENST00000518504 RBM26Q5T8P6 1007 aaKnown RBP10.41□□□□□ -0.74
SMN1-210ENST00000518504 RDH13Q8NBN7 331 aa10.41□□□□□ -0.74
SMN1-210ENST00000518504 RSPH4AQ5TD94 716 aa10.4□□□□□ -0.74
SMN1-210ENST00000518504 DACH1Q9UI36 760 aa10.39□□□□□ -0.75
SMN1-210ENST00000518504 HIC1Q14526 733 aa10.38□□□□□ -0.75
SMN1-210ENST00000518504 FCF1Q9Y324 198 aaKnown RBP10.38□□□□□ -0.75
SMN1-210ENST00000518504 DDX11L8A8MPP1 907 aa10.37□□□□□ -0.75
SMN1-210ENST00000518504 FUT2Q10981 343 aa10.37□□□□□ -0.75
SMN1-210ENST00000518504 P3H3Q8IVL6 736 aa10.37□□□□□ -0.75
SMN1-210ENST00000518504 MORN1Q5T089 497 aa10.36□□□□□ -0.75
SMN1-210ENST00000518504 PRDM9Q9NQV7 894 aa10.36□□□□□ -0.75
SMN1-210ENST00000518504 FAM160A2Q8N612 972 aaPredicted RBP10.34□□□□□ -0.75
SMN1-210ENST00000518504 THAP11Q96EK4 314 aa10.34□□□□□ -0.75
SMN1-210ENST00000518504 SLC27A5Q9Y2P5 690 aa10.34□□□□□ -0.75
SMN1-210ENST00000518504 RPIAP49247 311 aa10.33□□□□□ -0.76
SMN1-210ENST00000518504 DAXXQ9UER7 740 aaPredicted RBP10.33□□□□□ -0.76
SMN1-210ENST00000518504 GNPATO15228 680 aa10.32□□□□□ -0.76
SMN1-210ENST00000518504 ATP6V1AP38606 617 aa10.32□□□□□ -0.76
SMN1-210ENST00000518504 CYP4X1Q8N118 509 aa10.32□□□□□ -0.76
SMN1-210ENST00000518504 TOR4AQ9NXH8 423 aa10.32□□□□□ -0.76
SMN1-210ENST00000518504 CD2BP2O95400 341 aaKnown RBP10.31□□□□□ -0.76
SMN1-210ENST00000518504 FMNL1O95466 1100 aaPredicted RBP10.31□□□□□ -0.76
SMN1-210ENST00000518504 TREML4Q6UXN2 200 aa10.31□□□□□ -0.76
SMN1-210ENST00000518504 LMOD2Q6P5Q4 547 aa10.3□□□□□ -0.76
SMN1-210ENST00000518504 PHOX2BQ99453 314 aa10.3□□□□□ -0.76
SMN1-210ENST00000518504 GMPR2Q9P2T1 348 aaKnown RBP10.3□□□□□ -0.76
SMN1-210ENST00000518504 TESPA1A2RU30 521 aaPredicted RBP10.29□□□□□ -0.76
SMN1-210ENST00000518504 GPR37O15354 613 aa10.29□□□□□ -0.76
SMN1-210ENST00000518504 AXIN1O15169 862 aa10.28□□□□□ -0.76
SMN1-210ENST00000518504 GCGRP47871 477 aa10.28□□□□□ -0.76
SMN1-210ENST00000518504 LCE2AQ5TA79 106 aaPredicted RBP10.28□□□□□ -0.76
SMN1-210ENST00000518504 RNF19BQ6ZMZ0 732 aa10.27□□□□□ -0.77
SMN1-210ENST00000518504 C11orf95C9JLR9 678 aaPredicted RBP10.26□□□□□ -0.77
SMN1-210ENST00000518504 AVPP01185 164 aa10.26□□□□□ -0.77
SMN1-210ENST00000518504 BRICD5Q6PL45 260 aa10.26□□□□□ -0.77
SMN1-210ENST00000518504 CRIPAKQ8N1N5 446 aa10.26□□□□□ -0.77
SMN1-210ENST00000518504 TTC24A2A3L6 582 aaPredicted RBP10.25□□□□□ -0.77
SMN1-210ENST00000518504 ZBTB24O43167 697 aaPredicted RBP10.25□□□□□ -0.77
SMN1-210ENST00000518504 SMYD5Q6GMV2 418 aa10.24□□□□□ -0.77
SMN1-210ENST00000518504 SULF1Q8IWU6 871 aa10.23□□□□□ -0.77
SMN1-210ENST00000518504 WFS1O76024 890 aa10.21□□□□□ -0.77
SMN1-210ENST00000518504 SALL2Q9Y467 1007 aaPredicted RBP10.21□□□□□ -0.77
SMN1-210ENST00000518504 CTC1Q2NKJ3 1217 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms