RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 DDX10Q13206 875 aaKnown RBP11.24□□□□□ -0.61
ARFGEF1-204ENST00000518290 INSRP06213 1382 aa11.24□□□□□ -0.61
ARFGEF1-204ENST00000518290 QRICH2Q9H0J4 1663 aa11.23□□□□□ -0.61
ARFGEF1-204ENST00000518290 RPGRIP1LQ68CZ1 1315 aa11.22□□□□□ -0.61
ARFGEF1-204ENST00000518290 ERVK-7P63135 1459 aa11.22□□□□□ -0.61
ARFGEF1-204ENST00000518290 KNDC1Q76NI1 1749 aa11.22□□□□□ -0.61
ARFGEF1-204ENST00000518290 KIF3BO15066 747 aa11.21□□□□□ -0.62
ARFGEF1-204ENST00000518290 DCAF11Q8TEB1 546 aa11.21□□□□□ -0.62
ARFGEF1-204ENST00000518290 ANP32CO43423 234 aa11.2□□□□□ -0.62
ARFGEF1-204ENST00000518290 TESK2Q96S53 571 aa11.2□□□□□ -0.62
ARFGEF1-204ENST00000518290 WASHC2CQ9Y4E1 1318 aa11.19□□□□□ -0.62
ARFGEF1-204ENST00000518290 ASXL1Q8IXJ9 1541 aa11.19□□□□□ -0.62
ARFGEF1-204ENST00000518290 CARD11Q9BXL7 1154 aa11.18□□□□□ -0.62
ARFGEF1-204ENST00000518290 AEBP2Q6ZN18 517 aaPredicted RBP11.18□□□□□ -0.62
ARFGEF1-204ENST00000518290 PRKRIP1Q9H875 184 aaPredicted RBP11.17□□□□□ -0.62
ARFGEF1-204ENST00000518290 NRXN3Q9Y4C0 1643 aa11.17□□□□□ -0.62
ARFGEF1-204ENST00000518290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.62
ARFGEF1-204ENST00000518290 PARD3Q8TEW0 1356 aa11.17□□□□□ -0.62
ARFGEF1-204ENST00000518290 NPC1L1Q9UHC9 1359 aa11.17□□□□□ -0.62
ARFGEF1-204ENST00000518290 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
ARFGEF1-204ENST00000518290 DLC1Q96QB1 1528 aa11.16□□□□□ -0.62
ARFGEF1-204ENST00000518290 HIRIP3Q9BW71 556 aaPredicted RBP11.16□□□□□ -0.62
ARFGEF1-204ENST00000518290 GTF3C3Q9Y5Q9 886 aa11.16□□□□□ -0.62
ARFGEF1-204ENST00000518290 DISP3Q9P2K9 1392 aa11.15□□□□□ -0.62
ARFGEF1-204ENST00000518290 UBR1Q8IWV7 1749 aa11.15□□□□□ -0.62
ARFGEF1-204ENST00000518290 CYB5RLQ6IPT4 315 aa11.14□□□□□ -0.63
ARFGEF1-204ENST00000518290 SLC24A1O60721 1099 aa11.14□□□□□ -0.63
ARFGEF1-204ENST00000518290 ANKRD26Q9UPS8 1709 aa11.14□□□□□ -0.63
ARFGEF1-204ENST00000518290 LRPPRCP42704 1394 aaKnown RBP11.13□□□□□ -0.63
ARFGEF1-204ENST00000518290 RAPGEF3O95398 923 aa11.13□□□□□ -0.63
ARFGEF1-204ENST00000518290 ST20-MTHFSA0A0A6YYL1 179 aa11.13□□□□□ -0.63
ARFGEF1-204ENST00000518290 NBPF1Q3BBV0 1214 aa11.12□□□□□ -0.63
ARFGEF1-204ENST00000518290 FAM69CQ0P6D2 419 aa11.12□□□□□ -0.63
ARFGEF1-204ENST00000518290 PUS7Q96PZ0 661 aaKnown RBP11.12□□□□□ -0.63
ARFGEF1-204ENST00000518290 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
ARFGEF1-204ENST00000518290 BRD4O60885 1362 aaPredicted RBP11.11□□□□□ -0.63
ARFGEF1-204ENST00000518290 SLC52A1Q9NWF4 448 aa11.11□□□□□ -0.63
ARFGEF1-204ENST00000518290 ALKQ9UM73 1620 aa11.1□□□□□ -0.63
ARFGEF1-204ENST00000518290 CFAP65Q6ZU64 1925 aaKnown RBP11.1□□□□□ -0.63
ARFGEF1-204ENST00000518290 A2ML1A8K2U0 1454 aa11.1□□□□□ -0.63
ARFGEF1-204ENST00000518290 C14orf93Q9H972 538 aaKnown RBP11.1□□□□□ -0.63
ARFGEF1-204ENST00000518290 PTPRMP28827 1452 aa11.09□□□□□ -0.63
ARFGEF1-204ENST00000518290 C3P01024 1663 aa11.09□□□□□ -0.63
ARFGEF1-204ENST00000518290 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
ARFGEF1-204ENST00000518290 FER1L4A9Z1Z3 1794 aa11.08□□□□□ -0.64
ARFGEF1-204ENST00000518290 CPS1P31327 1500 aa11.08□□□□□ -0.64
ARFGEF1-204ENST00000518290 RALBP1Q15311 655 aa11.08□□□□□ -0.64
ARFGEF1-204ENST00000518290 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
ARFGEF1-204ENST00000518290 RIMS1Q86UR5 1692 aaKnown RBP11.08□□□□□ -0.64
ARFGEF1-204ENST00000518290 ADGRB2O60241 1585 aa11.08□□□□□ -0.64
ARFGEF1-204ENST00000518290 ADGRF5Q8IZF2 1346 aa11.07□□□□□ -0.64
ARFGEF1-204ENST00000518290 KDM2AQ9Y2K7 1162 aa11.07□□□□□ -0.64
ARFGEF1-204ENST00000518290 BLMP54132 1417 aaPredicted RBP11.06□□□□□ -0.64
ARFGEF1-204ENST00000518290 TMF1P82094 1093 aa11.06□□□□□ -0.64
ARFGEF1-204ENST00000518290 DIP2AQ14689 1571 aa11.05□□□□□ -0.64
ARFGEF1-204ENST00000518290 MYBBP1AQ9BQG0 1328 aaKnown RBP11.05□□□□□ -0.64
ARFGEF1-204ENST00000518290 RGL3Q3MIN7 710 aa11.05□□□□□ -0.64
ARFGEF1-204ENST00000518290 CDCA8Q53HL2 280 aa11.05□□□□□ -0.64
ARFGEF1-204ENST00000518290 SLIT1O75093 1534 aa11.05□□□□□ -0.64
ARFGEF1-204ENST00000518290 TECPR2O15040 1411 aa11.05□□□□□ -0.64
ARFGEF1-204ENST00000518290 SHPRHQ149N8 1683 aa11.04□□□□□ -0.64
ARFGEF1-204ENST00000518290 NLRP1Q9C000 1473 aa11.04□□□□□ -0.64
ARFGEF1-204ENST00000518290 ZBED9Q6R2W3 1325 aa11.04□□□□□ -0.64
ARFGEF1-204ENST00000518290 TOPAZ1Q8N9V7 1692 aa11.03□□□□□ -0.64
ARFGEF1-204ENST00000518290 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
ARFGEF1-204ENST00000518290 MED14O60244 1454 aa11.03□□□□□ -0.64
ARFGEF1-204ENST00000518290 ARHGAP23Q9P227 1491 aa11.02□□□□□ -0.64
ARFGEF1-204ENST00000518290 ZNF326Q5BKZ1 582 aaKnown RBP11.02□□□□□ -0.64
ARFGEF1-204ENST00000518290 KIF20BQ96Q89 1820 aa11.02□□□□□ -0.64
ARFGEF1-204ENST00000518290 AKAP12Q02952 1782 aa11.01□□□□□ -0.65
ARFGEF1-204ENST00000518290 ADAMTSL3P82987 1691 aa11.01□□□□□ -0.65
ARFGEF1-204ENST00000518290 YTHDC1Q96MU7 727 aaKnown RBP11.01□□□□□ -0.65
ARFGEF1-204ENST00000518290 GGT6Q6P531 493 aa11□□□□□ -0.65
ARFGEF1-204ENST00000518290 MON2Q7Z3U7 1717 aa11□□□□□ -0.65
ARFGEF1-204ENST00000518290 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
ARFGEF1-204ENST00000518290 CCDC184Q52MB2 194 aa11□□□□□ -0.65
ARFGEF1-204ENST00000518290 SMG6Q86US8 1419 aaKnown RBP10.99□□□□□ -0.65
ARFGEF1-204ENST00000518290 IDI1Q13907 227 aa10.99□□□□□ -0.65
ARFGEF1-204ENST00000518290 PNISRQ8TF01 805 aaKnown RBP10.99□□□□□ -0.65
ARFGEF1-204ENST00000518290 USP54Q70EL1 1684 aa10.99□□□□□ -0.65
ARFGEF1-204ENST00000518290 CFAP70Q5T0N1 1121 aa10.98□□□□□ -0.65
ARFGEF1-204ENST00000518290 NRKQ7Z2Y5 1582 aa10.98□□□□□ -0.65
ARFGEF1-204ENST00000518290 YTHDC2Q9H6S0 1430 aaKnown RBP10.98□□□□□ -0.65
ARFGEF1-204ENST00000518290 XRN1Q8IZH2 1706 aaKnown RBP10.98□□□□□ -0.65
ARFGEF1-204ENST00000518290 AMER1Q5JTC6 1135 aaPredicted RBP10.98□□□□□ -0.65
ARFGEF1-204ENST00000518290 FAM135BQ49AJ0 1406 aa10.97□□□□□ -0.65
ARFGEF1-204ENST00000518290 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
ARFGEF1-204ENST00000518290 NSD2O96028 1365 aa10.97□□□□□ -0.65
ARFGEF1-204ENST00000518290 ZMYM3Q14202 1370 aa10.97□□□□□ -0.65
ARFGEF1-204ENST00000518290 RIMS2Q9UQ26 1411 aa10.97□□□□□ -0.65
ARFGEF1-204ENST00000518290 CENPJQ9HC77 1338 aaPredicted RBP10.97□□□□□ -0.65
ARFGEF1-204ENST00000518290 CD163L1Q9NR16 1453 aa10.97□□□□□ -0.65
ARFGEF1-204ENST00000518290 NLRP13Q86W25 1043 aa10.96□□□□□ -0.65
ARFGEF1-204ENST00000518290 CDC42BPGQ6DT37 1551 aa10.96□□□□□ -0.65
ARFGEF1-204ENST00000518290 SIRT1Q96EB6 747 aa10.96□□□□□ -0.66
ARFGEF1-204ENST00000518290 RNF123Q5XPI4 1314 aa10.95□□□□□ -0.66
ARFGEF1-204ENST00000518290 ABCC11Q96J66 1382 aa10.94□□□□□ -0.66
ARFGEF1-204ENST00000518290 BCL11AQ9H165 835 aa10.94□□□□□ -0.66
ARFGEF1-204ENST00000518290 ATP7BP35670 1465 aa10.94□□□□□ -0.66
ARFGEF1-204ENST00000518290 MRS2Q9HD23 443 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms