RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 IDI1Q13907 227 aa16.62■□□□□ 0.25
ARFGEF1-202ENST00000517955 SIN3AQ96ST3 1273 aa16.62■□□□□ 0.25
ARFGEF1-202ENST00000517955 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
ARFGEF1-202ENST00000517955 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
ARFGEF1-202ENST00000517955 DSG3P32926 999 aa16.61■□□□□ 0.25
ARFGEF1-202ENST00000517955 SPATA31E1Q6ZUB1 1445 aa16.61■□□□□ 0.25
ARFGEF1-202ENST00000517955 UGGT1Q9NYU2 1555 aa16.6■□□□□ 0.25
ARFGEF1-202ENST00000517955 KIF1BO60333 1816 aa16.59■□□□□ 0.25
ARFGEF1-202ENST00000517955 ILDR1Q86SU0 546 aaPredicted RBP16.58■□□□□ 0.24
ARFGEF1-202ENST00000517955 ADGRB3O60242 1522 aa16.58■□□□□ 0.24
ARFGEF1-202ENST00000517955 TMEM131LA2VDJ0 1609 aa16.57■□□□□ 0.24
ARFGEF1-202ENST00000517955 STAC3Q96MF2 364 aa16.57■□□□□ 0.24
ARFGEF1-202ENST00000517955 A2ML1A8K2U0 1454 aa16.55■□□□□ 0.24
ARFGEF1-202ENST00000517955 RPGRIP1LQ68CZ1 1315 aa16.55■□□□□ 0.24
ARFGEF1-202ENST00000517955 NEUROD1Q13562 356 aa16.55■□□□□ 0.24
ARFGEF1-202ENST00000517955 ZNF142P52746 1687 aaPredicted RBP16.55■□□□□ 0.24
ARFGEF1-202ENST00000517955 MYO3AQ8NEV4 1616 aa16.55■□□□□ 0.24
ARFGEF1-202ENST00000517955 ZEB1P37275 1124 aaPredicted RBP16.53■□□□□ 0.24
ARFGEF1-202ENST00000517955 UBR1Q8IWV7 1749 aa16.53■□□□□ 0.24
ARFGEF1-202ENST00000517955 CEP170BQ9Y4F5 1589 aaPredicted RBP16.52■□□□□ 0.24
ARFGEF1-202ENST00000517955 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
ARFGEF1-202ENST00000517955 L3MBTL2Q969R5 705 aa16.51■□□□□ 0.23
ARFGEF1-202ENST00000517955 UHRF1BP1Q6BDS2 1440 aa16.51■□□□□ 0.23
ARFGEF1-202ENST00000517955 THEMISQ8N1K5 641 aaPredicted RBP16.5■□□□□ 0.23
ARFGEF1-202ENST00000517955 ZFYVE9O95405 1425 aa16.5■□□□□ 0.23
ARFGEF1-202ENST00000517955 STAG3Q9UJ98 1225 aa16.49■□□□□ 0.23
ARFGEF1-202ENST00000517955 MYO5BQ9ULV0 1848 aa16.49■□□□□ 0.23
ARFGEF1-202ENST00000517955 SLIT1O75093 1534 aa16.49■□□□□ 0.23
ARFGEF1-202ENST00000517955 ARHGAP23Q9P227 1491 aa16.48■□□□□ 0.23
ARFGEF1-202ENST00000517955 IFT172Q9UG01 1749 aa16.48■□□□□ 0.23
ARFGEF1-202ENST00000517955 RGL3Q3MIN7 710 aa16.48■□□□□ 0.23
ARFGEF1-202ENST00000517955 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
ARFGEF1-202ENST00000517955 NEXMIFQ5QGS0 1516 aa16.47■□□□□ 0.23
ARFGEF1-202ENST00000517955 CHGAP10645 457 aaKnown RBP16.47■□□□□ 0.23
ARFGEF1-202ENST00000517955 HDGFP51858 240 aaKnown RBP16.47■□□□□ 0.23
ARFGEF1-202ENST00000517955 MYOM2P54296 1465 aa16.47■□□□□ 0.23
ARFGEF1-202ENST00000517955 PPLO60437 1756 aa16.46■□□□□ 0.23
ARFGEF1-202ENST00000517955 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
ARFGEF1-202ENST00000517955 VGFO15240 615 aaPredicted RBP16.45■□□□□ 0.22
ARFGEF1-202ENST00000517955 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
ARFGEF1-202ENST00000517955 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.45■□□□□ 0.22
ARFGEF1-202ENST00000517955 NRXN1Q9ULB1 1477 aa16.45■□□□□ 0.22
ARFGEF1-202ENST00000517955 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
ARFGEF1-202ENST00000517955 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
ARFGEF1-202ENST00000517955 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
ARFGEF1-202ENST00000517955 PRAG1Q86YV5 1406 aa16.41■□□□□ 0.22
ARFGEF1-202ENST00000517955 ABCB7O75027 752 aa16.39■□□□□ 0.21
ARFGEF1-202ENST00000517955 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
ARFGEF1-202ENST00000517955 EID1Q9Y6B2 187 aa16.39■□□□□ 0.21
ARFGEF1-202ENST00000517955 PIK3C2GO75747 1445 aa16.38■□□□□ 0.21
ARFGEF1-202ENST00000517955 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
ARFGEF1-202ENST00000517955 LTKP29376 864 aa16.38■□□□□ 0.21
ARFGEF1-202ENST00000517955 ANKLE2Q86XL3 938 aa16.38■□□□□ 0.21
ARFGEF1-202ENST00000517955 KDM2AQ9Y2K7 1162 aa16.38■□□□□ 0.21
ARFGEF1-202ENST00000517955 ADGRF5Q8IZF2 1346 aa16.38■□□□□ 0.21
ARFGEF1-202ENST00000517955 SCAF11Q99590 1463 aaKnown RBP16.37■□□□□ 0.21
ARFGEF1-202ENST00000517955 TXNDC2Q86VQ3 553 aa16.37■□□□□ 0.21
ARFGEF1-202ENST00000517955 PLEKHG1Q9ULL1 1385 aa16.37■□□□□ 0.21
ARFGEF1-202ENST00000517955 KIAA1210Q9ULL0 1709 aa16.36■□□□□ 0.21
ARFGEF1-202ENST00000517955 MED14O60244 1454 aa16.36■□□□□ 0.21
ARFGEF1-202ENST00000517955 NBPF8Q3BBV2 869 aa16.36■□□□□ 0.21
ARFGEF1-202ENST00000517955 SETBP1Q9Y6X0 1596 aa16.35■□□□□ 0.21
ARFGEF1-202ENST00000517955 C14orf93Q9H972 538 aaKnown RBP16.35■□□□□ 0.21
ARFGEF1-202ENST00000517955 LAMC1P11047 1609 aa16.33■□□□□ 0.2
ARFGEF1-202ENST00000517955 POLR1AO95602 1720 aaPredicted RBP16.32■□□□□ 0.2
ARFGEF1-202ENST00000517955 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
ARFGEF1-202ENST00000517955 TRPM1Q7Z4N2 1603 aa16.32■□□□□ 0.2
ARFGEF1-202ENST00000517955 RALGAPBQ86X10 1494 aa16.32■□□□□ 0.2
ARFGEF1-202ENST00000517955 NRXN3Q9Y4C0 1643 aa16.32■□□□□ 0.2
ARFGEF1-202ENST00000517955 NUTM2DQ5VT03 806 aaPredicted RBP16.31■□□□□ 0.2
ARFGEF1-202ENST00000517955 TBX22Q9Y458 520 aa16.3■□□□□ 0.2
ARFGEF1-202ENST00000517955 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
ARFGEF1-202ENST00000517955 DIP2AQ14689 1571 aa16.3■□□□□ 0.2
ARFGEF1-202ENST00000517955 ADAMTS13Q76LX8 1427 aa16.29■□□□□ 0.2
ARFGEF1-202ENST00000517955 SETD1AO15047 1707 aaKnown RBP16.28■□□□□ 0.2
ARFGEF1-202ENST00000517955 HSPA2P54652 639 aa16.28■□□□□ 0.2
ARFGEF1-202ENST00000517955 CFAP70Q5T0N1 1121 aa16.28■□□□□ 0.2
ARFGEF1-202ENST00000517955 STRCQ7RTU9 1775 aa16.28■□□□□ 0.2
ARFGEF1-202ENST00000517955 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
ARFGEF1-202ENST00000517955 POLA2Q14181 598 aa16.27■□□□□ 0.2
ARFGEF1-202ENST00000517955 IQGAP1P46940 1657 aa16.27■□□□□ 0.19
ARFGEF1-202ENST00000517955 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
ARFGEF1-202ENST00000517955 ADGRB1O14514 1584 aa16.26■□□□□ 0.19
ARFGEF1-202ENST00000517955 NCKAP5LQ9HCH0 1330 aa16.26■□□□□ 0.19
ARFGEF1-202ENST00000517955 NBPF1Q3BBV0 1214 aa16.25■□□□□ 0.19
ARFGEF1-202ENST00000517955 ROCK2O75116 1388 aaKnown RBP16.25■□□□□ 0.19
ARFGEF1-202ENST00000517955 ASXL1Q8IXJ9 1541 aa16.23■□□□□ 0.19
ARFGEF1-202ENST00000517955 SIRT1Q96EB6 747 aa16.21■□□□□ 0.19
ARFGEF1-202ENST00000517955 BCANQ96GW7 911 aa16.21■□□□□ 0.19
ARFGEF1-202ENST00000517955 CARD11Q9BXL7 1154 aa16.21■□□□□ 0.19
ARFGEF1-202ENST00000517955 METP08581 1390 aa16.21■□□□□ 0.19
ARFGEF1-202ENST00000517955 LRPPRCP42704 1394 aaKnown RBP16.21■□□□□ 0.19
ARFGEF1-202ENST00000517955 ABCC11Q96J66 1382 aa16.21■□□□□ 0.19
ARFGEF1-202ENST00000517955 SLC26A8Q96RN1 970 aa16.2■□□□□ 0.18
ARFGEF1-202ENST00000517955 TECPR2O15040 1411 aa16.19■□□□□ 0.18
ARFGEF1-202ENST00000517955 YTHDC2Q9H6S0 1430 aaKnown RBP16.19■□□□□ 0.18
ARFGEF1-202ENST00000517955 TMEM132EQ6IEE7 984 aa16.19■□□□□ 0.18
ARFGEF1-202ENST00000517955 CHD2O14647 1828 aaKnown RBP16.18■□□□□ 0.18
ARFGEF1-202ENST00000517955 DLC1Q96QB1 1528 aa16.18■□□□□ 0.18
ARFGEF1-202ENST00000517955 KNDC1Q76NI1 1749 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms