RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
HMBOX1-204ENST00000517386 EIF2AK4Q9P2K8 1649 aaKnown RBP12.28□□□□□ -0.44
HMBOX1-204ENST00000517386 ZC3H13Q5T200 1668 aaKnown RBP12.28□□□□□ -0.44
HMBOX1-204ENST00000517386 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.44
HMBOX1-204ENST00000517386 PTPN23Q9H3S7 1636 aa12.27□□□□□ -0.44
HMBOX1-204ENST00000517386 UBR1Q8IWV7 1749 aa12.27□□□□□ -0.45
HMBOX1-204ENST00000517386 MAP3K1Q13233 1512 aa12.27□□□□□ -0.45
HMBOX1-204ENST00000517386 EID1Q9Y6B2 187 aa12.26□□□□□ -0.45
HMBOX1-204ENST00000517386 DAPK1P53355 1430 aa12.26□□□□□ -0.45
HMBOX1-204ENST00000517386 FAM50AQ14320 339 aaKnown RBP12.25□□□□□ -0.45
HMBOX1-204ENST00000517386 SLC26A8Q96RN1 970 aa12.25□□□□□ -0.45
HMBOX1-204ENST00000517386 IDI1Q13907 227 aa12.24□□□□□ -0.45
HMBOX1-204ENST00000517386 KANK1Q14678 1352 aa12.24□□□□□ -0.45
HMBOX1-204ENST00000517386 FGD6Q6ZV73 1430 aa12.24□□□□□ -0.45
HMBOX1-204ENST00000517386 BCANQ96GW7 911 aa12.24□□□□□ -0.45
HMBOX1-204ENST00000517386 ERBINQ96RT1 1412 aa12.24□□□□□ -0.45
HMBOX1-204ENST00000517386 CROCC2H7BZ55 1655 aa12.23□□□□□ -0.45
HMBOX1-204ENST00000517386 PIK3C2BO00750 1634 aa12.23□□□□□ -0.45
HMBOX1-204ENST00000517386 PRDM15P57071 1507 aaPredicted RBP12.23□□□□□ -0.45
HMBOX1-204ENST00000517386 ARHGAP23Q9P227 1491 aa12.22□□□□□ -0.45
HMBOX1-204ENST00000517386 TMEM2Q9UHN6 1383 aa12.22□□□□□ -0.45
HMBOX1-204ENST00000517386 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
HMBOX1-204ENST00000517386 ARHGAP31Q2M1Z3 1444 aa12.21□□□□□ -0.45
HMBOX1-204ENST00000517386 ANKRD30AQ9BXX3 1397 aa12.21□□□□□ -0.45
HMBOX1-204ENST00000517386 SLIT1O75093 1534 aa12.21□□□□□ -0.46
HMBOX1-204ENST00000517386 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
HMBOX1-204ENST00000517386 SYNMO15061 1565 aa12.19□□□□□ -0.46
HMBOX1-204ENST00000517386 PROSER2Q86WR7 435 aaPredicted RBP12.19□□□□□ -0.46
HMBOX1-204ENST00000517386 EFCAB6Q5THR3 1501 aa12.18□□□□□ -0.46
HMBOX1-204ENST00000517386 PRKAR2AP13861 404 aaKnown RBP12.18□□□□□ -0.46
HMBOX1-204ENST00000517386 NUTM2DQ5VT03 806 aaPredicted RBP12.18□□□□□ -0.46
HMBOX1-204ENST00000517386 ZBTB12Q9Y330 459 aaPredicted RBP12.18□□□□□ -0.46
HMBOX1-204ENST00000517386 XIRP1Q702N8 1843 aaKnown RBP12.17□□□□□ -0.46
HMBOX1-204ENST00000517386 CHGAP10645 457 aaKnown RBP12.17□□□□□ -0.46
HMBOX1-204ENST00000517386 PPARGC1BQ86YN6 1023 aaKnown RBP12.17□□□□□ -0.46
HMBOX1-204ENST00000517386 RGS17Q9UGC6 210 aaPredicted RBP12.17□□□□□ -0.46
HMBOX1-204ENST00000517386 KCNA6P17658 529 aa12.16□□□□□ -0.46
HMBOX1-204ENST00000517386 PPP1R15AO75807 674 aaPredicted RBP12.15□□□□□ -0.46
HMBOX1-204ENST00000517386 ITGAEP38570 1179 aa12.15□□□□□ -0.46
HMBOX1-204ENST00000517386 NOS1P29475 1434 aa12.14□□□□□ -0.47
HMBOX1-204ENST00000517386 LMTK2Q8IWU2 1503 aa12.14□□□□□ -0.47
HMBOX1-204ENST00000517386 ANKRD50Q9ULJ7 1429 aa12.13□□□□□ -0.47
HMBOX1-204ENST00000517386 ADGRB3O60242 1522 aa12.13□□□□□ -0.47
HMBOX1-204ENST00000517386 TET3O43151 1660 aa12.12□□□□□ -0.47
HMBOX1-204ENST00000517386 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
HMBOX1-204ENST00000517386 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
HMBOX1-204ENST00000517386 SLC52A1Q9NWF4 448 aa12.11□□□□□ -0.47
HMBOX1-204ENST00000517386 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
HMBOX1-204ENST00000517386 RIMS2Q9UQ26 1411 aa12.11□□□□□ -0.47
HMBOX1-204ENST00000517386 ADGRL2O95490 1459 aa12.1□□□□□ -0.47
HMBOX1-204ENST00000517386 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
HMBOX1-204ENST00000517386 ROBO1Q9Y6N7 1651 aa12.1□□□□□ -0.47
HMBOX1-204ENST00000517386 MYO5BQ9ULV0 1848 aa12.09□□□□□ -0.47
HMBOX1-204ENST00000517386 MSH6P52701 1360 aa12.09□□□□□ -0.47
HMBOX1-204ENST00000517386 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
HMBOX1-204ENST00000517386 SLAIN2Q9P270 581 aa12.09□□□□□ -0.47
HMBOX1-204ENST00000517386 ZFYVE9O95405 1425 aa12.08□□□□□ -0.48
HMBOX1-204ENST00000517386 GCC2Q8IWJ2 1684 aa12.07□□□□□ -0.48
HMBOX1-204ENST00000517386 KDM5AP29375 1690 aaKnown RBP12.06□□□□□ -0.48
HMBOX1-204ENST00000517386 PLEKHG1Q9ULL1 1385 aa12.06□□□□□ -0.48
HMBOX1-204ENST00000517386 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
HMBOX1-204ENST00000517386 NKTRP30414 1462 aaKnown RBP12.05□□□□□ -0.48
HMBOX1-204ENST00000517386 NWD1Q149M9 1564 aa12.05□□□□□ -0.48
HMBOX1-204ENST00000517386 NUP155O75694 1391 aa12.05□□□□□ -0.48
HMBOX1-204ENST00000517386 TMEM131LA2VDJ0 1609 aa12.04□□□□□ -0.48
HMBOX1-204ENST00000517386 RPRD2Q5VT52 1461 aaKnown RBP12.04□□□□□ -0.48
HMBOX1-204ENST00000517386 HDGFP51858 240 aaKnown RBP12.04□□□□□ -0.48
HMBOX1-204ENST00000517386 TBX22Q9Y458 520 aa12.03□□□□□ -0.48
HMBOX1-204ENST00000517386 E9PCH4 1651 aa12.03□□□□□ -0.48
HMBOX1-204ENST00000517386 PHLPP1O60346 1717 aa12.03□□□□□ -0.48
HMBOX1-204ENST00000517386 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.02□□□□□ -0.49
HMBOX1-204ENST00000517386 ADAMTS13Q76LX8 1427 aa12.02□□□□□ -0.49
HMBOX1-204ENST00000517386 UNC13BO14795 1591 aa12.01□□□□□ -0.49
HMBOX1-204ENST00000517386 ATF3P18847 181 aa12.01□□□□□ -0.49
HMBOX1-204ENST00000517386 ZNF326Q5BKZ1 582 aaKnown RBP12.01□□□□□ -0.49
HMBOX1-204ENST00000517386 MEX3CQ5U5Q3 659 aaKnown RBP12.01□□□□□ -0.49
HMBOX1-204ENST00000517386 AMOTL2Q9Y2J4 779 aa12.01□□□□□ -0.49
HMBOX1-204ENST00000517386 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
HMBOX1-204ENST00000517386 NUTM2BA6NNL0 878 aaPredicted RBP12□□□□□ -0.49
HMBOX1-204ENST00000517386 NUTM2EB1AL46 878 aaPredicted RBP12□□□□□ -0.49
HMBOX1-204ENST00000517386 NUTM2AQ8IVF1 878 aaPredicted RBP12□□□□□ -0.49
HMBOX1-204ENST00000517386 JCADQ9P266 1359 aa12□□□□□ -0.49
HMBOX1-204ENST00000517386 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
HMBOX1-204ENST00000517386 PTPRUQ92729 1446 aa11.99□□□□□ -0.49
HMBOX1-204ENST00000517386 SETD1AO15047 1707 aaKnown RBP11.99□□□□□ -0.49
HMBOX1-204ENST00000517386 ROCK1Q13464 1354 aa11.98□□□□□ -0.49
HMBOX1-204ENST00000517386 TRIM52Q96A61 297 aa11.98□□□□□ -0.49
HMBOX1-204ENST00000517386 C19orf44Q9H6X5 657 aa11.98□□□□□ -0.49
HMBOX1-204ENST00000517386 LRP6O75581 1613 aa11.97□□□□□ -0.49
HMBOX1-204ENST00000517386 IQGAP3Q86VI3 1631 aa11.97□□□□□ -0.49
HMBOX1-204ENST00000517386 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
HMBOX1-204ENST00000517386 DDX17Q92841 729 aaKnown RBP11.97□□□□□ -0.49
HMBOX1-204ENST00000517386 CLEC11AQ9Y240 323 aa11.97□□□□□ -0.49
HMBOX1-204ENST00000517386 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
HMBOX1-204ENST00000517386 COL16A1Q07092 1604 aaPredicted RBP11.97□□□□□ -0.49
HMBOX1-204ENST00000517386 BRINP3Q76B58 766 aa11.96□□□□□ -0.49
HMBOX1-204ENST00000517386 METP08581 1390 aa11.94□□□□□ -0.5
HMBOX1-204ENST00000517386 POTEMA6NI47 508 aa11.94□□□□□ -0.5
HMBOX1-204ENST00000517386 TRPM2O94759 1503 aa11.94□□□□□ -0.5
HMBOX1-204ENST00000517386 PIK3R4Q99570 1358 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms