RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 PER1O15534 1290 aaPredicted RBP1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 TBC1D12O60347 775 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 STAU1O95793 577 aaKnown RBP1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PTGER2P43116 358 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PPP4CP60510 307 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 SKOR1P84550 965 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 MYT1Q01538 1121 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 FUT2Q10981 343 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PDIA6Q15084 440 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 SCUBE3Q8IX30 993 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 EPS8L1Q8TE68 723 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 HPS1Q92902 700 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 CDKN2AIPQ9NXV6 580 aaPredicted RBP1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 SLC27A5Q9Y2P5 690 aa1.19□□□□□ -2.22
RNU6-1049P-201ENST00000516414 GDF9O60383 454 aa1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 ZPR1O75312 459 aa1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 BMP1P13497 986 aa1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 LORP23490 312 aaPredicted RBP1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 MDM2Q00987 491 aaPredicted RBP1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 FAM98CQ17RN3 349 aaKnown RBP1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 CSPP1Q1MSJ5 1256 aa1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 TRAF7Q6Q0C0 670 aa1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PROCA1Q8NCQ7 364 aaPredicted RBP1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 CABLES1Q8TDN4 633 aa1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 KLRG1Q96E93 195 aa1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 THAP11Q96EK4 314 aa1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 STAC3Q96MF2 364 aa1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 KRTAP17-1Q9BYP8 105 aa1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 IRX2Q9BZI1 471 aaPredicted RBP1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 GMPR2Q9P2T1 348 aaKnown RBP1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 TSR3Q9UJK0 312 aaKnown RBP1.18□□□□□ -2.22
RNU6-1049P-201ENST00000516414 TESPA1A2RU30 521 aaPredicted RBP1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 ITGBL1O95965 494 aaPredicted RBP1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 CFHP08603 1231 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 MS4A1P11836 297 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PBX2P40425 430 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 KCNC4Q03721 635 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 TSGA10IPQ3SY00 556 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 LINC01559Q495D7 138 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 C4orf48Q5BLP8 95 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 RTL5Q5HYW3 569 aaPredicted RBP1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 ZNF787Q6DD87 383 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 GPR161Q8N6U8 529 aaKnown RBP1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 ANKK1Q8NFD2 765 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PXYLP1Q8TE99 480 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 LRCH3Q96II8 777 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 SLC4A5Q9BY07 1137 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 GPBP1L1Q9HC44 474 aaPredicted RBP1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 EIF4ENIF1Q9NRA8 985 aaKnown RBP1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 AAASQ9NRG9 546 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PDZRN3Q9UPQ7 1066 aa1.17□□□□□ -2.22
RNU6-1049P-201ENST00000516414 ERBB4Q15303 1308 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 MOXD2PA6NHM9 499 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 SMPD1P17405 629 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 SLC19A1P41440 591 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PLCB2Q00722 1185 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 QPCTQ16769 361 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 MORN1Q5T089 497 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 SPRYD7Q5W111 196 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 METTL3Q86U44 580 aaKnown RBP1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 PACS2Q86VP3 889 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 CCDC24Q8N4L8 307 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 FOXJ1Q92949 421 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 TMEM134Q9H6X4 195 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 SLC24A3Q9HC58 644 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 POLR3EQ9NVU0 708 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 LIMD1Q9UGP4 676 aa1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 FCF1Q9Y324 198 aaKnown RBP1.16□□□□□ -2.22
RNU6-1049P-201ENST00000516414 FAM187AA6NFU0 413 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 CFAP99D6REC4 459 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 LGR5O75473 907 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 ZNF697Q5TEC3 545 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 BRICD5Q6PL45 260 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 TRIM46Q7Z4K8 759 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 RDH13Q8NBN7 331 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 WHAMMQ8TF30 809 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 LRRN4Q8WUT4 740 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 BAP1Q92560 729 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 CCDC102AQ96A19 550 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 MRGPRX2Q96LB1 330 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 EPAS1Q99814 870 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 OCSTAMPQ9BR26 566 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 ZFAND3Q9H8U3 227 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 WDR70Q9NW82 654 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 MAP10Q9P2G4 905 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 HCN2Q9UL51 889 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 PCDHB3Q9Y5E6 796 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 TLL2Q9Y6L7 1015 aa1.15□□□□□ -2.23
RNU6-1049P-201ENST00000516414 FIGNL2A6NMB9 653 aa1.14□□□□□ -2.23
RNU6-1049P-201ENST00000516414 IRF6O14896 467 aa1.14□□□□□ -2.23
RNU6-1049P-201ENST00000516414 SIAH2O43255 324 aa1.14□□□□□ -2.23
RNU6-1049P-201ENST00000516414 NR3C2P08235 984 aa1.14□□□□□ -2.23
RNU6-1049P-201ENST00000516414 GCGRP47871 477 aa1.14□□□□□ -2.23
RNU6-1049P-201ENST00000516414 KRT76Q01546 638 aa1.14□□□□□ -2.23
RNU6-1049P-201ENST00000516414 CTDSPL2Q05D32 466 aa1.14□□□□□ -2.23
RNU6-1049P-201ENST00000516414 CBLBQ13191 982 aa1.14□□□□□ -2.23
RNU6-1049P-201ENST00000516414 GRIN2CQ14957 1233 aa1.14□□□□□ -2.23
RNU6-1049P-201ENST00000516414 ZC3H15Q8WU90 426 aaKnown RBP1.14□□□□□ -2.23
RNU6-1049P-201ENST00000516414 SPIRE2Q8WWL2 714 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms