RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 DISP1Q96F81 1524 aa12.44□□□□□ -0.42
SFXN1-211ENST00000515736 ARID3AQ99856 593 aa12.44□□□□□ -0.42
SFXN1-211ENST00000515736 CTTNBP2Q8WZ74 1663 aa12.44□□□□□ -0.42
SFXN1-211ENST00000515736 TBC1D12O60347 775 aa12.43□□□□□ -0.42
SFXN1-211ENST00000515736 KIAA0556O60303 1618 aa12.43□□□□□ -0.42
SFXN1-211ENST00000515736 ZCCHC11Q5TAX3 1644 aaKnown RBP12.43□□□□□ -0.42
SFXN1-211ENST00000515736 KDM4FA0A1W2PPD8 638 aa12.42□□□□□ -0.42
SFXN1-211ENST00000515736 TMEM92Q6UXU6 159 aa12.42□□□□□ -0.42
SFXN1-211ENST00000515736 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
SFXN1-211ENST00000515736 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
SFXN1-211ENST00000515736 ATMINO43313 823 aaPredicted RBP12.41□□□□□ -0.42
SFXN1-211ENST00000515736 EVI5O60447 810 aa12.41□□□□□ -0.42
SFXN1-211ENST00000515736 MS4A1P11836 297 aa12.41□□□□□ -0.42
SFXN1-211ENST00000515736 CLCN6P51797 869 aa12.41□□□□□ -0.42
SFXN1-211ENST00000515736 MAP3K4Q9Y6R4 1608 aa12.4□□□□□ -0.42
SFXN1-211ENST00000515736 ARID3CA6NKF2 412 aa12.4□□□□□ -0.42
SFXN1-211ENST00000515736 EFCAB5A4FU69 1503 aa12.39□□□□□ -0.43
SFXN1-211ENST00000515736 MAP3K1Q13233 1512 aa12.39□□□□□ -0.43
SFXN1-211ENST00000515736 KDM5BQ9UGL1 1544 aa12.39□□□□□ -0.43
SFXN1-211ENST00000515736 APBB1O00213 710 aa12.39□□□□□ -0.43
SFXN1-211ENST00000515736 ASTLQ6HA08 431 aaPredicted RBP12.39□□□□□ -0.43
SFXN1-211ENST00000515736 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
SFXN1-211ENST00000515736 REPIN1Q9BWE0 567 aaKnown RBP12.39□□□□□ -0.43
SFXN1-211ENST00000515736 EPRSP07814 1512 aaKnown RBP12.38□□□□□ -0.43
SFXN1-211ENST00000515736 PCMTD1Q96MG8 357 aaPredicted RBP12.38□□□□□ -0.43
SFXN1-211ENST00000515736 PLCG2P16885 1265 aa12.37□□□□□ -0.43
SFXN1-211ENST00000515736 TEX14Q8IWB6 1497 aa12.37□□□□□ -0.43
SFXN1-211ENST00000515736 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
SFXN1-211ENST00000515736 A6NJR5 290 aa12.35□□□□□ -0.43
SFXN1-211ENST00000515736 ARHGAP35Q9NRY4 1499 aa12.34□□□□□ -0.43
SFXN1-211ENST00000515736 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
SFXN1-211ENST00000515736 WDR7Q9Y4E6 1490 aa12.34□□□□□ -0.43
SFXN1-211ENST00000515736 SH3D19Q5HYK7 790 aa12.33□□□□□ -0.44
SFXN1-211ENST00000515736 PTCD2Q8WV60 388 aaKnown RBP12.32□□□□□ -0.44
SFXN1-211ENST00000515736 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
SFXN1-211ENST00000515736 NPDC1Q9NQX5 325 aaPredicted RBP12.32□□□□□ -0.44
SFXN1-211ENST00000515736 COL17A1Q9UMD9 1497 aaPredicted RBP12.32□□□□□ -0.44
SFXN1-211ENST00000515736 CFAP43Q8NDM7 1665 aa12.32□□□□□ -0.44
SFXN1-211ENST00000515736 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
SFXN1-211ENST00000515736 CDHR5Q9HBB8 845 aa12.31□□□□□ -0.44
SFXN1-211ENST00000515736 TRAK2O60296 914 aa12.3□□□□□ -0.44
SFXN1-211ENST00000515736 CLCN1P35523 988 aa12.3□□□□□ -0.44
SFXN1-211ENST00000515736 EN1Q05925 392 aaPredicted RBP12.3□□□□□ -0.44
SFXN1-211ENST00000515736 ABCA8O94911 1581 aa12.3□□□□□ -0.44
SFXN1-211ENST00000515736 KCNH8Q96L42 1107 aa12.29□□□□□ -0.44
SFXN1-211ENST00000515736 MCM6Q14566 821 aa12.28□□□□□ -0.44
SFXN1-211ENST00000515736 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
SFXN1-211ENST00000515736 EPAS1Q99814 870 aa12.27□□□□□ -0.45
SFXN1-211ENST00000515736 CD109Q6YHK3 1445 aa12.27□□□□□ -0.45
SFXN1-211ENST00000515736 TIAM1Q13009 1591 aa12.26□□□□□ -0.45
SFXN1-211ENST00000515736 PHF14O94880 888 aa12.26□□□□□ -0.45
SFXN1-211ENST00000515736 MDM2Q00987 491 aaPredicted RBP12.26□□□□□ -0.45
SFXN1-211ENST00000515736 SKIV2LQ15477 1246 aaKnown RBP12.26□□□□□ -0.45
SFXN1-211ENST00000515736 PHOX2BQ99453 314 aa12.26□□□□□ -0.45
SFXN1-211ENST00000515736 SAMD9Q5K651 1589 aa12.26□□□□□ -0.45
SFXN1-211ENST00000515736 EVX2Q03828 476 aa12.25□□□□□ -0.45
SFXN1-211ENST00000515736 SLC34A2O95436 690 aa12.24□□□□□ -0.45
SFXN1-211ENST00000515736 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
SFXN1-211ENST00000515736 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
SFXN1-211ENST00000515736 FYCO1Q9BQS8 1478 aa12.24□□□□□ -0.45
SFXN1-211ENST00000515736 HECW2Q9P2P5 1572 aa12.23□□□□□ -0.45
SFXN1-211ENST00000515736 MAP3K7O43318 606 aa12.23□□□□□ -0.45
SFXN1-211ENST00000515736 CCDC82Q8N4S0 544 aa12.23□□□□□ -0.45
SFXN1-211ENST00000515736 RRBP1Q9P2E9 1410 aaKnown RBP12.22□□□□□ -0.45
SFXN1-211ENST00000515736 HAX1O00165 279 aa12.22□□□□□ -0.45
SFXN1-211ENST00000515736 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
SFXN1-211ENST00000515736 COLQQ9Y215 455 aaPredicted RBP12.22□□□□□ -0.45
SFXN1-211ENST00000515736 FMN1Q68DA7 1419 aa12.2□□□□□ -0.46
SFXN1-211ENST00000515736 SEC24BO95487 1268 aa12.2□□□□□ -0.46
SFXN1-211ENST00000515736 BEGAINQ9BUH8 593 aa12.2□□□□□ -0.46
SFXN1-211ENST00000515736 PCF11O94913 1555 aaKnown RBP12.2□□□□□ -0.46
SFXN1-211ENST00000515736 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
SFXN1-211ENST00000515736 SLAIN1Q8ND83 568 aa12.19□□□□□ -0.46
SFXN1-211ENST00000515736 RBM33Q96EV2 1170 aaKnown RBP12.19□□□□□ -0.46
SFXN1-211ENST00000515736 PCDHGA10Q9Y5H3 936 aa12.19□□□□□ -0.46
SFXN1-211ENST00000515736 RAPGEF6Q8TEU7 1601 aa12.19□□□□□ -0.46
SFXN1-211ENST00000515736 FAM217BQ9NTX9 383 aaPredicted RBP12.18□□□□□ -0.46
SFXN1-211ENST00000515736 ATP10BO94823 1461 aa12.18□□□□□ -0.46
SFXN1-211ENST00000515736 CASKIN1Q8WXD9 1431 aa12.18□□□□□ -0.46
SFXN1-211ENST00000515736 RANGAP1P46060 587 aaPredicted RBP12.17□□□□□ -0.46
SFXN1-211ENST00000515736 PROSER2Q86WR7 435 aaPredicted RBP12.17□□□□□ -0.46
SFXN1-211ENST00000515736 PROCA1Q8NCQ7 364 aaPredicted RBP12.17□□□□□ -0.46
SFXN1-211ENST00000515736 ABCA9Q8IUA7 1624 aa12.17□□□□□ -0.46
SFXN1-211ENST00000515736 TYW1BQ6NUM6 668 aa12.16□□□□□ -0.46
SFXN1-211ENST00000515736 CCER1Q8TC90 406 aaPredicted RBP12.16□□□□□ -0.46
SFXN1-211ENST00000515736 ARAP3Q8WWN8 1544 aa12.16□□□□□ -0.46
SFXN1-211ENST00000515736 LRRC9Q6ZRR7 1453 aa12.15□□□□□ -0.46
SFXN1-211ENST00000515736 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
SFXN1-211ENST00000515736 METTL3Q86U44 580 aaKnown RBP12.15□□□□□ -0.46
SFXN1-211ENST00000515736 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
SFXN1-211ENST00000515736 FNBP4Q8N3X1 1017 aaPredicted RBP12.15□□□□□ -0.46
SFXN1-211ENST00000515736 OATP04181 439 aa12.14□□□□□ -0.47
SFXN1-211ENST00000515736 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.14□□□□□ -0.47
SFXN1-211ENST00000515736 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
SFXN1-211ENST00000515736 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
SFXN1-211ENST00000515736 POM121Q96HA1 1249 aa12.13□□□□□ -0.47
SFXN1-211ENST00000515736 POLR3EQ9NVU0 708 aa12.13□□□□□ -0.47
SFXN1-211ENST00000515736 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
SFXN1-211ENST00000515736 MYSM1Q5VVJ2 828 aa12.12□□□□□ -0.47
SFXN1-211ENST00000515736 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms