RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 MADDQ8WXG6 1647 aa13.21□□□□□ -0.3
TPM3-222ENST00000515609 CDCA8Q53HL2 280 aa13.2□□□□□ -0.3
TPM3-222ENST00000515609 NLRP1Q9C000 1473 aa13.2□□□□□ -0.3
TPM3-222ENST00000515609 NRXN1Q9ULB1 1477 aa13.2□□□□□ -0.3
TPM3-222ENST00000515609 KDM5AP29375 1690 aaKnown RBP13.19□□□□□ -0.3
TPM3-222ENST00000515609 FBXO31Q5XUX0 539 aaPredicted RBP13.19□□□□□ -0.3
TPM3-222ENST00000515609 IFT172Q9UG01 1749 aa13.19□□□□□ -0.3
TPM3-222ENST00000515609 PPLO60437 1756 aa13.17□□□□□ -0.3
TPM3-222ENST00000515609 TMEM131LA2VDJ0 1609 aa13.17□□□□□ -0.3
TPM3-222ENST00000515609 SCAF11Q99590 1463 aaKnown RBP13.17□□□□□ -0.3
TPM3-222ENST00000515609 SETBP1Q9Y6X0 1596 aa13.17□□□□□ -0.3
TPM3-222ENST00000515609 FER1L4A9Z1Z3 1794 aa13.17□□□□□ -0.3
TPM3-222ENST00000515609 PIK3C2GO75747 1445 aa13.16□□□□□ -0.3
TPM3-222ENST00000515609 C14orf93Q9H972 538 aaKnown RBP13.16□□□□□ -0.3
TPM3-222ENST00000515609 TMF1P82094 1093 aa13.15□□□□□ -0.3
TPM3-222ENST00000515609 DDX10Q13206 875 aaKnown RBP13.15□□□□□ -0.3
TPM3-222ENST00000515609 ADGRF5Q8IZF2 1346 aa13.14□□□□□ -0.31
TPM3-222ENST00000515609 NEXMIFQ5QGS0 1516 aa13.14□□□□□ -0.31
TPM3-222ENST00000515609 POLR1AO95602 1720 aaPredicted RBP13.14□□□□□ -0.31
TPM3-222ENST00000515609 ST20-MTHFSA0A0A6YYL1 179 aa13.14□□□□□ -0.31
TPM3-222ENST00000515609 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
TPM3-222ENST00000515609 HIRIP3Q9BW71 556 aaPredicted RBP13.14□□□□□ -0.31
TPM3-222ENST00000515609 CCDC7Q96M83 1385 aa13.14□□□□□ -0.31
TPM3-222ENST00000515609 A2ML1A8K2U0 1454 aa13.13□□□□□ -0.31
TPM3-222ENST00000515609 THEMISQ8N1K5 641 aaPredicted RBP13.13□□□□□ -0.31
TPM3-222ENST00000515609 ANP32CO43423 234 aa13.12□□□□□ -0.31
TPM3-222ENST00000515609 EID1Q9Y6B2 187 aa13.12□□□□□ -0.31
TPM3-222ENST00000515609 RIMS2Q9UQ26 1411 aa13.12□□□□□ -0.31
TPM3-222ENST00000515609 WASHC2AQ641Q2 1341 aa13.12□□□□□ -0.31
TPM3-222ENST00000515609 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
TPM3-222ENST00000515609 C3P01024 1663 aa13.1□□□□□ -0.31
TPM3-222ENST00000515609 KIF7Q2M1P5 1343 aa13.1□□□□□ -0.31
TPM3-222ENST00000515609 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
TPM3-222ENST00000515609 IQGAP1P46940 1657 aa13.09□□□□□ -0.31
TPM3-222ENST00000515609 TMEM2Q9UHN6 1383 aa13.08□□□□□ -0.31
TPM3-222ENST00000515609 ADAMTSL3P82987 1691 aa13.07□□□□□ -0.32
TPM3-222ENST00000515609 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
TPM3-222ENST00000515609 MYO5BQ9ULV0 1848 aa13.05□□□□□ -0.32
TPM3-222ENST00000515609 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
TPM3-222ENST00000515609 TESK2Q96S53 571 aa13.05□□□□□ -0.32
TPM3-222ENST00000515609 UBR1Q8IWV7 1749 aa13.05□□□□□ -0.32
TPM3-222ENST00000515609 CEBPAP49715 358 aaPredicted RBP13.04□□□□□ -0.32
TPM3-222ENST00000515609 MIER1Q8N108 512 aa13.04□□□□□ -0.32
TPM3-222ENST00000515609 BCANQ96GW7 911 aa13.04□□□□□ -0.32
TPM3-222ENST00000515609 POLR3GLQ9BT43 218 aa13.04□□□□□ -0.32
TPM3-222ENST00000515609 RIMS1Q86UR5 1692 aaKnown RBP13.04□□□□□ -0.32
TPM3-222ENST00000515609 KTN1Q86UP2 1357 aaKnown RBP13.04□□□□□ -0.32
TPM3-222ENST00000515609 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
TPM3-222ENST00000515609 CCER2I3L3R5 266 aa13.03□□□□□ -0.32
TPM3-222ENST00000515609 PLEKHG1Q9ULL1 1385 aa13.03□□□□□ -0.32
TPM3-222ENST00000515609 SETD1BQ9UPS6 1966 aaKnown RBP13.03□□□□□ -0.32
TPM3-222ENST00000515609 SLIT1O75093 1534 aa13.03□□□□□ -0.32
TPM3-222ENST00000515609 MYO3AQ8NEV4 1616 aa13.02□□□□□ -0.32
TPM3-222ENST00000515609 C11orf95C9JLR9 678 aaPredicted RBP13.02□□□□□ -0.33
TPM3-222ENST00000515609 NUTM2DQ5VT03 806 aaPredicted RBP13.02□□□□□ -0.33
TPM3-222ENST00000515609 TXNDC2Q86VQ3 553 aa13.02□□□□□ -0.33
TPM3-222ENST00000515609 ALKQ9UM73 1620 aa13.02□□□□□ -0.33
TPM3-222ENST00000515609 SIRT1Q96EB6 747 aa13.01□□□□□ -0.33
TPM3-222ENST00000515609 TRAK1Q9UPV9 953 aa13.01□□□□□ -0.33
TPM3-222ENST00000515609 EVC2Q86UK5 1308 aa13.01□□□□□ -0.33
TPM3-222ENST00000515609 ARHGAP23Q9P227 1491 aa13□□□□□ -0.33
TPM3-222ENST00000515609 YTHDC2Q9H6S0 1430 aaKnown RBP13□□□□□ -0.33
TPM3-222ENST00000515609 LRPPRCP42704 1394 aaKnown RBP13□□□□□ -0.33
TPM3-222ENST00000515609 POGKQ9P215 609 aa13□□□□□ -0.33
TPM3-222ENST00000515609 CEP170BQ9Y4F5 1589 aaPredicted RBP12.99□□□□□ -0.33
TPM3-222ENST00000515609 ABCC11Q96J66 1382 aa12.99□□□□□ -0.33
TPM3-222ENST00000515609 TMEM132EQ6IEE7 984 aa12.99□□□□□ -0.33
TPM3-222ENST00000515609 ANKLE2Q86XL3 938 aa12.99□□□□□ -0.33
TPM3-222ENST00000515609 DLC1Q96QB1 1528 aa12.98□□□□□ -0.33
TPM3-222ENST00000515609 PLPPR3Q6T4P5 718 aa12.98□□□□□ -0.33
TPM3-222ENST00000515609 DIP2AQ14689 1571 aa12.98□□□□□ -0.33
TPM3-222ENST00000515609 DISP3Q9P2K9 1392 aa12.97□□□□□ -0.33
TPM3-222ENST00000515609 NINLQ9Y2I6 1382 aa12.97□□□□□ -0.33
TPM3-222ENST00000515609 ZNF142P52746 1687 aaPredicted RBP12.97□□□□□ -0.33
TPM3-222ENST00000515609 TBX22Q9Y458 520 aa12.97□□□□□ -0.33
TPM3-222ENST00000515609 PTPRMP28827 1452 aa12.97□□□□□ -0.33
TPM3-222ENST00000515609 PIK3R4Q99570 1358 aa12.96□□□□□ -0.33
TPM3-222ENST00000515609 STK26Q9P289 416 aa12.96□□□□□ -0.33
TPM3-222ENST00000515609 FAM135BQ49AJ0 1406 aa12.96□□□□□ -0.34
TPM3-222ENST00000515609 RALBP1Q15311 655 aa12.95□□□□□ -0.34
TPM3-222ENST00000515609 QRICH2Q9H0J4 1663 aa12.94□□□□□ -0.34
TPM3-222ENST00000515609 CENPBP07199 599 aaPredicted RBP12.94□□□□□ -0.34
TPM3-222ENST00000515609 KNSTRNQ9Y448 316 aa12.94□□□□□ -0.34
TPM3-222ENST00000515609 TECPR2O15040 1411 aa12.94□□□□□ -0.34
TPM3-222ENST00000515609 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
TPM3-222ENST00000515609 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
TPM3-222ENST00000515609 PRAM1Q96QH2 718 aa12.93□□□□□ -0.34
TPM3-222ENST00000515609 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
TPM3-222ENST00000515609 LTKP29376 864 aa12.92□□□□□ -0.34
TPM3-222ENST00000515609 ASXL1Q8IXJ9 1541 aa12.91□□□□□ -0.34
TPM3-222ENST00000515609 MED14O60244 1454 aa12.91□□□□□ -0.34
TPM3-222ENST00000515609 KNDC1Q76NI1 1749 aa12.91□□□□□ -0.34
TPM3-222ENST00000515609 ADAMTS13Q76LX8 1427 aa12.9□□□□□ -0.34
TPM3-222ENST00000515609 PANK3Q9H999 370 aa12.9□□□□□ -0.34
TPM3-222ENST00000515609 NRXN3Q9Y4C0 1643 aa12.9□□□□□ -0.34
TPM3-222ENST00000515609 NPC1L1Q9UHC9 1359 aa12.9□□□□□ -0.34
TPM3-222ENST00000515609 SETD1AO15047 1707 aaKnown RBP12.9□□□□□ -0.34
TPM3-222ENST00000515609 SRPK2P78362 688 aaKnown RBP12.89□□□□□ -0.35
TPM3-222ENST00000515609 TERF2IPQ9NYB0 399 aa12.89□□□□□ -0.35
TPM3-222ENST00000515609 METP08581 1390 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms