RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PCDHB3Q9Y5E6 796 aa10.89□□□□□ -0.67
LINC01088-211ENST00000515597 HIC1Q14526 733 aa10.88□□□□□ -0.67
LINC01088-211ENST00000515597 BLOC1S3Q6QNY0 202 aa10.88□□□□□ -0.67
LINC01088-211ENST00000515597 CFHP08603 1231 aa10.87□□□□□ -0.67
LINC01088-211ENST00000515597 FECHP22830 423 aa10.87□□□□□ -0.67
LINC01088-211ENST00000515597 PXYLP1Q8TE99 480 aa10.87□□□□□ -0.67
LINC01088-211ENST00000515597 PRR14Q9BWN1 585 aa10.87□□□□□ -0.67
LINC01088-211ENST00000515597 PRKD2Q9BZL6 878 aa10.87□□□□□ -0.67
LINC01088-211ENST00000515597 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.87□□□□□ -0.67
LINC01088-211ENST00000515597 GPR37O15354 613 aa10.86□□□□□ -0.67
LINC01088-211ENST00000515597 ZPR1O75312 459 aa10.86□□□□□ -0.67
LINC01088-211ENST00000515597 SMYD5Q6GMV2 418 aa10.86□□□□□ -0.67
LINC01088-211ENST00000515597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.85□□□□□ -0.67
LINC01088-211ENST00000515597 TLL1O43897 1013 aa10.85□□□□□ -0.67
LINC01088-211ENST00000515597 SLC10A3P09131 477 aa10.84□□□□□ -0.67
LINC01088-211ENST00000515597 METTL3Q86U44 580 aaKnown RBP10.84□□□□□ -0.67
LINC01088-211ENST00000515597 GNPATO15228 680 aa10.83□□□□□ -0.68
LINC01088-211ENST00000515597 KMT5BQ4FZB7 885 aa10.83□□□□□ -0.68
LINC01088-211ENST00000515597 OATP04181 439 aa10.82□□□□□ -0.68
LINC01088-211ENST00000515597 Q6ZNB5 142 aa10.82□□□□□ -0.68
LINC01088-211ENST00000515597 ACTN4O43707 911 aaKnown RBP10.81□□□□□ -0.68
LINC01088-211ENST00000515597 NLRP7Q8WX94 980 aa10.8□□□□□ -0.68
LINC01088-211ENST00000515597 GGCXP38435 758 aa10.79□□□□□ -0.68
LINC01088-211ENST00000515597 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
LINC01088-211ENST00000515597 V9GY48 417 aaPredicted RBP10.78□□□□□ -0.68
LINC01088-211ENST00000515597 GFRA3O60609 400 aa10.77□□□□□ -0.69
LINC01088-211ENST00000515597 RNF223E7ERA6 249 aa10.75□□□□□ -0.69
LINC01088-211ENST00000515597 PUS10Q3MIT2 529 aaKnown RBP10.74□□□□□ -0.69
LINC01088-211ENST00000515597 TMUB1Q9BVT8 246 aa10.74□□□□□ -0.69
LINC01088-211ENST00000515597 S1PR4O95977 384 aa10.73□□□□□ -0.69
LINC01088-211ENST00000515597 RDH13Q8NBN7 331 aa10.73□□□□□ -0.69
LINC01088-211ENST00000515597 PHOX2BQ99453 314 aa10.73□□□□□ -0.69
LINC01088-211ENST00000515597 LCE2BO14633 110 aa10.72□□□□□ -0.69
LINC01088-211ENST00000515597 PPEF1O14829 653 aaPredicted RBP10.72□□□□□ -0.69
LINC01088-211ENST00000515597 NR1I2O75469 434 aa10.72□□□□□ -0.69
LINC01088-211ENST00000515597 LAPTM4AQ15012 233 aa10.72□□□□□ -0.69
LINC01088-211ENST00000515597 EMID1Q96A84 441 aaPredicted RBP10.72□□□□□ -0.69
LINC01088-211ENST00000515597 DDX11L8A8MPP1 907 aa10.71□□□□□ -0.69
LINC01088-211ENST00000515597 ADH1BP00325 375 aa10.71□□□□□ -0.69
LINC01088-211ENST00000515597 DAXXQ9UER7 740 aaPredicted RBP10.71□□□□□ -0.69
LINC01088-211ENST00000515597 RSPH4AQ5TD94 716 aa10.7□□□□□ -0.7
LINC01088-211ENST00000515597 VSIG10Q8N0Z9 540 aa10.7□□□□□ -0.7
LINC01088-211ENST00000515597 NRG2O14511 850 aaPredicted RBP10.69□□□□□ -0.7
LINC01088-211ENST00000515597 SCUBE3Q8IX30 993 aa10.68□□□□□ -0.7
LINC01088-211ENST00000515597 PDZRN3Q9UPQ7 1066 aa10.68□□□□□ -0.7
LINC01088-211ENST00000515597 SLC19A1P41440 591 aa10.67□□□□□ -0.7
LINC01088-211ENST00000515597 ANKLE1Q8NAG6 615 aa10.67□□□□□ -0.7
LINC01088-211ENST00000515597 FUT2Q10981 343 aa10.66□□□□□ -0.7
LINC01088-211ENST00000515597 SLC6A16Q9GZN6 736 aa10.66□□□□□ -0.7
LINC01088-211ENST00000515597 PLA2G2CQ5R387 149 aa10.63□□□□□ -0.71
LINC01088-211ENST00000515597 MORN1Q5T089 497 aa10.63□□□□□ -0.71
LINC01088-211ENST00000515597 TRAF7Q6Q0C0 670 aa10.63□□□□□ -0.71
LINC01088-211ENST00000515597 LIAT1Q6ZQX7 453 aa10.63□□□□□ -0.71
LINC01088-211ENST00000515597 TRIM67Q6ZTA4 783 aa10.63□□□□□ -0.71
LINC01088-211ENST00000515597 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
LINC01088-211ENST00000515597 SPSB2Q99619 263 aa10.63□□□□□ -0.71
LINC01088-211ENST00000515597 GCGRP47871 477 aa10.62□□□□□ -0.71
LINC01088-211ENST00000515597 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
LINC01088-211ENST00000515597 MAP2K5Q13163 448 aa10.61□□□□□ -0.71
LINC01088-211ENST00000515597 SPRYD7Q5W111 196 aa10.61□□□□□ -0.71
LINC01088-211ENST00000515597 ATP6V1AP38606 617 aa10.6□□□□□ -0.71
LINC01088-211ENST00000515597 SLC27A5Q9Y2P5 690 aa10.59□□□□□ -0.71
LINC01088-211ENST00000515597 ZNF697Q5TEC3 545 aa10.58□□□□□ -0.72
LINC01088-211ENST00000515597 ZNF598Q86UK7 904 aaKnown RBP10.58□□□□□ -0.72
LINC01088-211ENST00000515597 THAP11Q96EK4 314 aa10.58□□□□□ -0.72
LINC01088-211ENST00000515597 PRDM9Q9NQV7 894 aa10.57□□□□□ -0.72
LINC01088-211ENST00000515597 IRF6O14896 467 aa10.56□□□□□ -0.72
LINC01088-211ENST00000515597 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
LINC01088-211ENST00000515597 TNFRSF10AO00220 468 aa10.55□□□□□ -0.72
LINC01088-211ENST00000515597 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
LINC01088-211ENST00000515597 FAM160A2Q8N612 972 aaPredicted RBP10.55□□□□□ -0.72
LINC01088-211ENST00000515597 CCDC102AQ96A19 550 aa10.55□□□□□ -0.72
LINC01088-211ENST00000515597 CD46P15529 392 aa10.54□□□□□ -0.72
LINC01088-211ENST00000515597 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
LINC01088-211ENST00000515597 FCF1Q9Y324 198 aaKnown RBP10.54□□□□□ -0.72
LINC01088-211ENST00000515597 MINK1Q8N4C8 1332 aaPredicted RBP10.53□□□□□ -0.72
LINC01088-211ENST00000515597 BRICD5Q6PL45 260 aa10.52□□□□□ -0.73
LINC01088-211ENST00000515597 PRR20EP86478 221 aa10.51□□□□□ -0.73
LINC01088-211ENST00000515597 PRR20CP86479 221 aa10.51□□□□□ -0.73
LINC01088-211ENST00000515597 PRR20DP86480 221 aa10.51□□□□□ -0.73
LINC01088-211ENST00000515597 PRR20BP86481 221 aa10.51□□□□□ -0.73
LINC01088-211ENST00000515597 PRR20AP86496 221 aa10.51□□□□□ -0.73
LINC01088-211ENST00000515597 GDF9O60383 454 aa10.5□□□□□ -0.73
LINC01088-211ENST00000515597 HLA-CQ95604 372 aa10.5□□□□□ -0.73
LINC01088-211ENST00000515597 GRIPAP1Q4V328 841 aa10.49□□□□□ -0.73
LINC01088-211ENST00000515597 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC01088-211ENST00000515597 SALL2Q9Y467 1007 aaPredicted RBP10.49□□□□□ -0.73
LINC01088-211ENST00000515597 KDM4AO75164 1064 aa10.48□□□□□ -0.73
LINC01088-211ENST00000515597 FOXC1Q12948 553 aa10.48□□□□□ -0.73
LINC01088-211ENST00000515597 PKDCCQ504Y2 493 aa10.48□□□□□ -0.73
LINC01088-211ENST00000515597 FAM187AA6NFU0 413 aa10.47□□□□□ -0.73
LINC01088-211ENST00000515597 MSS51Q4VC12 460 aa10.47□□□□□ -0.73
LINC01088-211ENST00000515597 LMOD2Q6P5Q4 547 aa10.46□□□□□ -0.73
LINC01088-211ENST00000515597 PKD2L1Q9P0L9 805 aa10.46□□□□□ -0.73
LINC01088-211ENST00000515597 RPIAP49247 311 aa10.45□□□□□ -0.74
LINC01088-211ENST00000515597 MYT1Q01538 1121 aa10.45□□□□□ -0.74
LINC01088-211ENST00000515597 Q3C1V9 767 aa10.45□□□□□ -0.74
LINC01088-211ENST00000515597 GPCPD1Q9NPB8 672 aa10.45□□□□□ -0.74
LINC01088-211ENST00000515597 DGAT1O75907 488 aa10.44□□□□□ -0.74
LINC01088-211ENST00000515597 FAM217BQ9NTX9 383 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 237.5 ms