RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 DCAF8L1A6NGE4 600 aa19.75■□□□□ 0.75
TRIM41-207ENST00000515223 CPLX2Q6PUV4 134 aaKnown RBP19.75■□□□□ 0.75
TRIM41-207ENST00000515223 C9orf78Q9NZ63 289 aaPredicted RBP19.75■□□□□ 0.75
TRIM41-207ENST00000515223 FGD6Q6ZV73 1430 aa19.75■□□□□ 0.75
TRIM41-207ENST00000515223 DDX58O95786 925 aaKnown RBP19.74■□□□□ 0.75
TRIM41-207ENST00000515223 PDE4CQ08493 712 aa19.74■□□□□ 0.75
TRIM41-207ENST00000515223 VPS37DQ86XT2 251 aa19.74■□□□□ 0.75
TRIM41-207ENST00000515223 RRP7AQ9Y3A4 280 aaKnown RBP19.73■□□□□ 0.75
TRIM41-207ENST00000515223 WDR97A6NE52 1622 aa19.73■□□□□ 0.75
TRIM41-207ENST00000515223 PHF23Q9BUL5 403 aaPredicted RBP19.72■□□□□ 0.75
TRIM41-207ENST00000515223 TPM3P06753 285 aa19.72■□□□□ 0.75
TRIM41-207ENST00000515223 EIF2S2P20042 333 aaKnown RBP19.72■□□□□ 0.75
TRIM41-207ENST00000515223 RAD21O60216 631 aa19.72■□□□□ 0.75
TRIM41-207ENST00000515223 RILPL2Q969X0 211 aa19.72■□□□□ 0.75
TRIM41-207ENST00000515223 A0A0U1RQG5 324 aaPredicted RBP19.71■□□□□ 0.75
TRIM41-207ENST00000515223 H3BQV1 296 aa19.71■□□□□ 0.75
TRIM41-207ENST00000515223 AMER1Q5JTC6 1135 aaPredicted RBP19.71■□□□□ 0.75
TRIM41-207ENST00000515223 IFFO2Q5TF58 517 aa19.71■□□□□ 0.75
TRIM41-207ENST00000515223 FAM184AQ8NB25 1140 aa19.71■□□□□ 0.75
TRIM41-207ENST00000515223 IGF1RP08069 1367 aa19.71■□□□□ 0.75
TRIM41-207ENST00000515223 RAPGEF4Q8WZA2 1011 aa19.7■□□□□ 0.74
TRIM41-207ENST00000515223 KLHL34Q8N239 644 aa19.7■□□□□ 0.74
TRIM41-207ENST00000515223 CCDC184Q52MB2 194 aa19.69■□□□□ 0.74
TRIM41-207ENST00000515223 AKNAQ7Z591 1439 aa19.68■□□□□ 0.74
TRIM41-207ENST00000515223 TPD52L1Q16890 204 aaPredicted RBP19.68■□□□□ 0.74
TRIM41-207ENST00000515223 BCL2L13Q9BXK5 485 aa19.68■□□□□ 0.74
TRIM41-207ENST00000515223 CWC22Q9HCG8 908 aaKnown RBP19.68■□□□□ 0.74
TRIM41-207ENST00000515223 DIAPH3Q9NSV4 1193 aa19.68■□□□□ 0.74
TRIM41-207ENST00000515223 PHF14O94880 888 aa19.68■□□□□ 0.74
TRIM41-207ENST00000515223 RUFY2Q8WXA3 655 aa19.67■□□□□ 0.74
TRIM41-207ENST00000515223 PES1O00541 588 aaKnown RBP19.67■□□□□ 0.74
TRIM41-207ENST00000515223 ZKSCAN2Q63HK3 967 aa19.67■□□□□ 0.74
TRIM41-207ENST00000515223 FBXW7Q969H0 707 aa19.67■□□□□ 0.74
TRIM41-207ENST00000515223 DIAPH1O60610 1272 aaKnown RBP19.67■□□□□ 0.74
TRIM41-207ENST00000515223 TSR1Q2NL82 804 aaKnown RBP19.66■□□□□ 0.74
TRIM41-207ENST00000515223 E9PSI1 815 aa19.65■□□□□ 0.74
TRIM41-207ENST00000515223 RBM33Q96EV2 1170 aaKnown RBP19.65■□□□□ 0.74
TRIM41-207ENST00000515223 DHX16O60231 1041 aaKnown RBP19.65■□□□□ 0.74
TRIM41-207ENST00000515223 IL27Q8NEV9 243 aa19.65■□□□□ 0.74
TRIM41-207ENST00000515223 ATP6V1DQ9Y5K8 247 aa19.65■□□□□ 0.74
TRIM41-207ENST00000515223 APPP05067 770 aa19.64■□□□□ 0.74
TRIM41-207ENST00000515223 ANKRD45Q5TZF3 282 aa19.64■□□□□ 0.74
TRIM41-207ENST00000515223 TPM2P07951 284 aa19.64■□□□□ 0.73
TRIM41-207ENST00000515223 COG6Q9Y2V7 657 aa19.64■□□□□ 0.73
TRIM41-207ENST00000515223 TRIM29Q14134 588 aa19.63■□□□□ 0.73
TRIM41-207ENST00000515223 IFIT2P09913 472 aaKnown RBP19.63■□□□□ 0.73
TRIM41-207ENST00000515223 NFKBIBQ15653 356 aa19.63■□□□□ 0.73
TRIM41-207ENST00000515223 MYOM3Q5VTT5 1437 aa19.63■□□□□ 0.73
TRIM41-207ENST00000515223 TRDNQ13061 729 aa19.62■□□□□ 0.73
TRIM41-207ENST00000515223 ZKSCAN1P17029 563 aaPredicted RBP19.62■□□□□ 0.73
TRIM41-207ENST00000515223 GOLGA6L1Q8N7Z2 621 aa19.62■□□□□ 0.73
TRIM41-207ENST00000515223 KRI1Q8N9T8 703 aaKnown RBP19.62■□□□□ 0.73
TRIM41-207ENST00000515223 RSPH6AQ9H0K4 717 aa19.62■□□□□ 0.73
TRIM41-207ENST00000515223 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
TRIM41-207ENST00000515223 API5Q9BZZ5 524 aaKnown RBP19.61■□□□□ 0.73
TRIM41-207ENST00000515223 G3BP1Q13283 466 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRIM41-207ENST00000515223 CCDC47Q96A33 483 aaKnown RBP19.61■□□□□ 0.73
TRIM41-207ENST00000515223 ZNF644Q9H582 1327 aaPredicted RBP19.61■□□□□ 0.73
TRIM41-207ENST00000515223 NLRP2Q9NX02 1062 aa19.6■□□□□ 0.73
TRIM41-207ENST00000515223 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
TRIM41-207ENST00000515223 CDCA7LQ96GN5 454 aa19.6■□□□□ 0.73
TRIM41-207ENST00000515223 ANO8Q9HCE9 1232 aaPredicted RBP19.59■□□□□ 0.73
TRIM41-207ENST00000515223 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
TRIM41-207ENST00000515223 CPLX1O14810 134 aa19.59■□□□□ 0.73
TRIM41-207ENST00000515223 STAC3Q96MF2 364 aa19.59■□□□□ 0.73
TRIM41-207ENST00000515223 APAF1O14727 1248 aa19.58■□□□□ 0.73
TRIM41-207ENST00000515223 TPM1P09493 284 aa19.58■□□□□ 0.73
TRIM41-207ENST00000515223 FKBP5Q13451 457 aaPredicted RBP19.58■□□□□ 0.73
TRIM41-207ENST00000515223 CNKSR2Q8WXI2 1034 aa19.58■□□□□ 0.73
TRIM41-207ENST00000515223 BRPF3Q9ULD4 1205 aa19.58■□□□□ 0.73
TRIM41-207ENST00000515223 NECTIN2Q92692 538 aa19.57■□□□□ 0.72
TRIM41-207ENST00000515223 CCDC43Q96MW1 224 aaKnown RBP19.57■□□□□ 0.72
TRIM41-207ENST00000515223 MCTP1Q6DN14 999 aa19.57■□□□□ 0.72
TRIM41-207ENST00000515223 WWC1Q8IX03 1113 aa19.56■□□□□ 0.72
TRIM41-207ENST00000515223 ERICH2A1L162 156 aa19.56■□□□□ 0.72
TRIM41-207ENST00000515223 RIPK4P57078 832 aa19.56■□□□□ 0.72
TRIM41-207ENST00000515223 ROCK1Q13464 1354 aa19.56■□□□□ 0.72
TRIM41-207ENST00000515223 NCOA2Q15596 1464 aa19.56■□□□□ 0.72
TRIM41-207ENST00000515223 RAD54L2Q9Y4B4 1467 aa19.55■□□□□ 0.72
TRIM41-207ENST00000515223 HSP90AB4PQ58FF6 505 aa19.55■□□□□ 0.72
TRIM41-207ENST00000515223 CUX1P39880 1505 aa19.55■□□□□ 0.72
TRIM41-207ENST00000515223 RNF20Q5VTR2 975 aa19.55■□□□□ 0.72
TRIM41-207ENST00000515223 FOXD4L5Q5VV16 416 aaPredicted RBP19.55■□□□□ 0.72
TRIM41-207ENST00000515223 FOXD4L4Q8WXT5 416 aaPredicted RBP19.55■□□□□ 0.72
TRIM41-207ENST00000515223 REC8O95072 547 aa19.54■□□□□ 0.72
TRIM41-207ENST00000515223 HSP90AA2PQ14568 343 aaPredicted RBP19.54■□□□□ 0.72
TRIM41-207ENST00000515223 DDX19BQ9UMR2 479 aa19.54■□□□□ 0.72
TRIM41-207ENST00000515223 GOLGA6L19H0YKK7 550 aa19.54■□□□□ 0.72
TRIM41-207ENST00000515223 BECN2A8MW95 431 aa19.54■□□□□ 0.72
TRIM41-207ENST00000515223 TSPYL4Q9UJ04 414 aa19.53■□□□□ 0.72
TRIM41-207ENST00000515223 RIC3Q7Z5B4 369 aa19.52■□□□□ 0.72
TRIM41-207ENST00000515223 NBPF8Q3BBV2 869 aa19.52■□□□□ 0.72
TRIM41-207ENST00000515223 GPRASP1Q5JY77 1395 aa19.52■□□□□ 0.71
TRIM41-207ENST00000515223 MIA2Q96PC5 1412 aa19.52■□□□□ 0.71
TRIM41-207ENST00000515223 DDX11L8A8MPP1 907 aa19.51■□□□□ 0.71
TRIM41-207ENST00000515223 NFXL1Q6ZNB6 911 aa19.51■□□□□ 0.71
TRIM41-207ENST00000515223 NLRP6P59044 892 aa19.51■□□□□ 0.71
TRIM41-207ENST00000515223 CASKIN1Q8WXD9 1431 aa19.51■□□□□ 0.71
TRIM41-207ENST00000515223 GNAI1P63096 354 aa19.51■□□□□ 0.71
TRIM41-207ENST00000515223 SF3B2Q13435 895 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms