RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 IRF6O14896 467 aa10.35□□□□□ -0.75
MATR3-223ENST00000514402 FAM161AQ3B820 660 aa10.35□□□□□ -0.75
MATR3-223ENST00000514402 ZC3H15Q8WU90 426 aaKnown RBP10.35□□□□□ -0.75
MATR3-223ENST00000514402 ZMYND10O75800 440 aa10.34□□□□□ -0.75
MATR3-223ENST00000514402 WBP1LQ9NX94 342 aa10.34□□□□□ -0.75
MATR3-223ENST00000514402 BARGINQ6ZT62 677 aa10.33□□□□□ -0.76
MATR3-223ENST00000514402 PRR14Q9BWN1 585 aa10.32□□□□□ -0.76
MATR3-223ENST00000514402 RNF40O75150 1001 aa10.31□□□□□ -0.76
MATR3-223ENST00000514402 IFFO2Q5TF58 517 aa10.3□□□□□ -0.76
MATR3-223ENST00000514402 DAXXQ9UER7 740 aaPredicted RBP10.3□□□□□ -0.76
MATR3-223ENST00000514402 RSPH4AQ5TD94 716 aa10.29□□□□□ -0.76
MATR3-223ENST00000514402 CCDC102AQ96A19 550 aa10.29□□□□□ -0.76
MATR3-223ENST00000514402 KRI1Q8N9T8 703 aaKnown RBP10.28□□□□□ -0.76
MATR3-223ENST00000514402 ITGBL1O95965 494 aaPredicted RBP10.27□□□□□ -0.77
MATR3-223ENST00000514402 SULF1Q8IWU6 871 aa10.27□□□□□ -0.77
MATR3-223ENST00000514402 PHOX2BQ99453 314 aa10.27□□□□□ -0.77
MATR3-223ENST00000514402 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
MATR3-223ENST00000514402 KMT5BQ4FZB7 885 aa10.24□□□□□ -0.77
MATR3-223ENST00000514402 APLP1P51693 650 aa10.23□□□□□ -0.77
MATR3-223ENST00000514402 SLC10A3P09131 477 aa10.21□□□□□ -0.77
MATR3-223ENST00000514402 CLCN1P35523 988 aa10.21□□□□□ -0.77
MATR3-223ENST00000514402 ACTN4O43707 911 aaKnown RBP10.2□□□□□ -0.78
MATR3-223ENST00000514402 CFHP08603 1231 aa10.2□□□□□ -0.78
MATR3-223ENST00000514402 AMHR2Q16671 573 aa10.2□□□□□ -0.78
MATR3-223ENST00000514402 AK7Q96M32 723 aa10.2□□□□□ -0.78
MATR3-223ENST00000514402 GPCPD1Q9NPB8 672 aa10.2□□□□□ -0.78
MATR3-223ENST00000514402 KCNC4Q03721 635 aa10.19□□□□□ -0.78
MATR3-223ENST00000514402 IL21Q9HBE4 155 aa10.19□□□□□ -0.78
MATR3-223ENST00000514402 DDX11L8A8MPP1 907 aa10.18□□□□□ -0.78
MATR3-223ENST00000514402 RDH13Q8NBN7 331 aa10.18□□□□□ -0.78
MATR3-223ENST00000514402 NLRP7Q8WX94 980 aa10.18□□□□□ -0.78
MATR3-223ENST00000514402 TMUB1Q9BVT8 246 aa10.18□□□□□ -0.78
MATR3-223ENST00000514402 MDM2Q00987 491 aaPredicted RBP10.17□□□□□ -0.78
MATR3-223ENST00000514402 TJAP1Q5JTD0 557 aa10.17□□□□□ -0.78
MATR3-223ENST00000514402 MTRQ99707 1265 aa10.17□□□□□ -0.78
MATR3-223ENST00000514402 PCDHB3Q9Y5E6 796 aa10.17□□□□□ -0.78
MATR3-223ENST00000514402 CD46P15529 392 aa10.15□□□□□ -0.78
MATR3-223ENST00000514402 GCGRP47871 477 aa10.15□□□□□ -0.78
MATR3-223ENST00000514402 TRIM66O15016 1216 aa10.13□□□□□ -0.79
MATR3-223ENST00000514402 FAM217BQ9NTX9 383 aaPredicted RBP10.13□□□□□ -0.79
MATR3-223ENST00000514402 A0A0G2JS52 829 aa10.11□□□□□ -0.79
MATR3-223ENST00000514402 TTLL12Q14166 644 aaPredicted RBP10.11□□□□□ -0.79
MATR3-223ENST00000514402 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
MATR3-223ENST00000514402 ZPR1O75312 459 aa10.1□□□□□ -0.79
MATR3-223ENST00000514402 NR1I2O75469 434 aa10.1□□□□□ -0.79
MATR3-223ENST00000514402 GRIPAP1Q4V328 841 aa10.1□□□□□ -0.79
MATR3-223ENST00000514402 RGS20O76081 388 aa10.09□□□□□ -0.79
MATR3-223ENST00000514402 ATP6V1AP38606 617 aa10.09□□□□□ -0.79
MATR3-223ENST00000514402 COPS2P61201 443 aa10.09□□□□□ -0.79
MATR3-223ENST00000514402 USP46P62068 366 aa10.09□□□□□ -0.79
MATR3-223ENST00000514402 BLOC1S3Q6QNY0 202 aa10.09□□□□□ -0.79
MATR3-223ENST00000514402 GIGYF2Q6Y7W6 1299 aaKnown RBP10.08□□□□□ -0.8
MATR3-223ENST00000514402 FUT2Q10981 343 aa10.07□□□□□ -0.8
MATR3-223ENST00000514402 PARP9Q8IXQ6 854 aa10.07□□□□□ -0.8
MATR3-223ENST00000514402 REPIN1Q9BWE0 567 aaKnown RBP10.07□□□□□ -0.8
MATR3-223ENST00000514402 KDM4AO75164 1064 aa10.06□□□□□ -0.8
MATR3-223ENST00000514402 SSTR3P32745 418 aaPredicted RBP10.06□□□□□ -0.8
MATR3-223ENST00000514402 PDE4DQ08499 809 aa10.06□□□□□ -0.8
MATR3-223ENST00000514402 ZNF516Q92618 1163 aa10.06□□□□□ -0.8
MATR3-223ENST00000514402 MORN1Q5T089 497 aa10.05□□□□□ -0.8
MATR3-223ENST00000514402 SALL2Q9Y467 1007 aaPredicted RBP10.04□□□□□ -0.8
MATR3-223ENST00000514402 GGCXP38435 758 aa10.03□□□□□ -0.8
MATR3-223ENST00000514402 SCUBE3Q8IX30 993 aa10.03□□□□□ -0.8
MATR3-223ENST00000514402 DIXDC1Q155Q3 683 aa10.02□□□□□ -0.81
MATR3-223ENST00000514402 PUS10Q3MIT2 529 aaKnown RBP10.02□□□□□ -0.81
MATR3-223ENST00000514402 ADH1BP00325 375 aa10.01□□□□□ -0.81
MATR3-223ENST00000514402 NUTM1Q86Y26 1132 aa10.01□□□□□ -0.81
MATR3-223ENST00000514402 HOXA2O43364 376 aa10□□□□□ -0.81
MATR3-223ENST00000514402 Q3C1V9 767 aa10□□□□□ -0.81
MATR3-223ENST00000514402 SLC27A5Q9Y2P5 690 aa9.99□□□□□ -0.81
MATR3-223ENST00000514402 FMNL1O95466 1100 aaPredicted RBP9.98□□□□□ -0.81
MATR3-223ENST00000514402 PPP1R18Q6NYC8 613 aa9.98□□□□□ -0.81
MATR3-223ENST00000514402 NKX2-3Q8TAU0 364 aa9.98□□□□□ -0.81
MATR3-223ENST00000514402 BEGAINQ9BUH8 593 aa9.98□□□□□ -0.81
MATR3-223ENST00000514402 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.98□□□□□ -0.81
MATR3-223ENST00000514402 TLL1O43897 1013 aa9.97□□□□□ -0.81
MATR3-223ENST00000514402 MS4A1P11836 297 aa9.97□□□□□ -0.81
MATR3-223ENST00000514402 THAP11Q96EK4 314 aa9.97□□□□□ -0.81
MATR3-223ENST00000514402 SPSB2Q99619 263 aa9.97□□□□□ -0.81
MATR3-223ENST00000514402 GJA5P36382 358 aa9.96□□□□□ -0.82
MATR3-223ENST00000514402 BRICD5Q6PL45 260 aa9.96□□□□□ -0.82
MATR3-223ENST00000514402 SPIRE2Q8WWL2 714 aa9.95□□□□□ -0.82
MATR3-223ENST00000514402 MSS51Q4VC12 460 aa9.94□□□□□ -0.82
MATR3-223ENST00000514402 SLC6A16Q9GZN6 736 aa9.94□□□□□ -0.82
MATR3-223ENST00000514402 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
MATR3-223ENST00000514402 ANKLE1Q8NAG6 615 aa9.92□□□□□ -0.82
MATR3-223ENST00000514402 S1PR4O95977 384 aa9.91□□□□□ -0.82
MATR3-223ENST00000514402 TBC1D2Q9BYX2 928 aa9.91□□□□□ -0.82
MATR3-223ENST00000514402 RNF223E7ERA6 249 aa9.9□□□□□ -0.82
MATR3-223ENST00000514402 FDX1P10109 184 aa9.9□□□□□ -0.82
MATR3-223ENST00000514402 RNF19BQ6ZMZ0 732 aa9.9□□□□□ -0.82
MATR3-223ENST00000514402 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
MATR3-223ENST00000514402 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
MATR3-223ENST00000514402 KDM4CQ9H3R0 1056 aa9.89□□□□□ -0.83
MATR3-223ENST00000514402 V9GY48 417 aaPredicted RBP9.89□□□□□ -0.83
MATR3-223ENST00000514402 MOXD2PA6NHM9 499 aa9.88□□□□□ -0.83
MATR3-223ENST00000514402 FAM160A2Q8N612 972 aaPredicted RBP9.88□□□□□ -0.83
MATR3-223ENST00000514402 HLA-CQ95604 372 aa9.88□□□□□ -0.83
MATR3-223ENST00000514402 RSPH6AQ9H0K4 717 aa9.88□□□□□ -0.83
MATR3-223ENST00000514402 TUSC1Q2TAM9 212 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms