RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 RGS20O76081 388 aa7.19□□□□□ -1.26
SGCB-203ENST00000514133 CDHR5Q9HBB8 845 aa7.19□□□□□ -1.26
SGCB-203ENST00000514133 SEPT9Q9UHD8 586 aaPredicted RBP7.19□□□□□ -1.26
SGCB-203ENST00000514133 PNMA3Q9UL41 463 aa7.19□□□□□ -1.26
SGCB-203ENST00000514133 HIC1Q14526 733 aa7.18□□□□□ -1.26
SGCB-203ENST00000514133 ARID3AQ99856 593 aa7.18□□□□□ -1.26
SGCB-203ENST00000514133 MINK1Q8N4C8 1332 aaPredicted RBP7.18□□□□□ -1.26
SGCB-203ENST00000514133 GPR37O15354 613 aa7.17□□□□□ -1.26
SGCB-203ENST00000514133 ITGBL1O95965 494 aaPredicted RBP7.17□□□□□ -1.26
SGCB-203ENST00000514133 PPP4CP60510 307 aa7.17□□□□□ -1.26
SGCB-203ENST00000514133 NUDT18Q6ZVK8 323 aa7.17□□□□□ -1.26
SGCB-203ENST00000514133 RBM46Q8TBY0 533 aaKnown RBP7.17□□□□□ -1.26
SGCB-203ENST00000514133 OATP04181 439 aa7.16□□□□□ -1.26
SGCB-203ENST00000514133 PADI6Q6TGC4 694 aa7.16□□□□□ -1.26
SGCB-203ENST00000514133 SLF2Q8IX21 1173 aa7.16□□□□□ -1.26
SGCB-203ENST00000514133 CCDC102AQ96A19 550 aa7.16□□□□□ -1.26
SGCB-203ENST00000514133 DDRGK1Q96HY6 314 aa7.16□□□□□ -1.26
SGCB-203ENST00000514133 PRR14Q9BWN1 585 aa7.16□□□□□ -1.26
SGCB-203ENST00000514133 PODXL2Q9NZ53 605 aa7.16□□□□□ -1.26
SGCB-203ENST00000514133 FAM198AQ9UFP1 575 aa7.16□□□□□ -1.26
SGCB-203ENST00000514133 IRF6O14896 467 aa7.15□□□□□ -1.26
SGCB-203ENST00000514133 BCAMP50895 628 aa7.15□□□□□ -1.26
SGCB-203ENST00000514133 MAP2K5Q13163 448 aa7.15□□□□□ -1.26
SGCB-203ENST00000514133 EYA1Q99502 592 aa7.15□□□□□ -1.26
SGCB-203ENST00000514133 HPS5Q9UPZ3 1129 aa7.15□□□□□ -1.26
SGCB-203ENST00000514133 PLEKHG3A1L390 1219 aa7.14□□□□□ -1.27
SGCB-203ENST00000514133 DNAJB2P25686 324 aa7.14□□□□□ -1.27
SGCB-203ENST00000514133 SAMD7Q7Z3H4 446 aa7.14□□□□□ -1.27
SGCB-203ENST00000514133 WBP1LQ9NX94 342 aa7.13□□□□□ -1.27
SGCB-203ENST00000514133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.12□□□□□ -1.27
SGCB-203ENST00000514133 GNPATO15228 680 aa7.12□□□□□ -1.27
SGCB-203ENST00000514133 AMHR2Q16671 573 aa7.12□□□□□ -1.27
SGCB-203ENST00000514133 PARP9Q8IXQ6 854 aa7.12□□□□□ -1.27
SGCB-203ENST00000514133 ADGRG1Q9Y653 693 aa7.12□□□□□ -1.27
SGCB-203ENST00000514133 FECHP22830 423 aa7.11□□□□□ -1.27
SGCB-203ENST00000514133 KCNC4Q03721 635 aa7.11□□□□□ -1.27
SGCB-203ENST00000514133 TTLL12Q14166 644 aaPredicted RBP7.11□□□□□ -1.27
SGCB-203ENST00000514133 RSPH4AQ5TD94 716 aa7.11□□□□□ -1.27
SGCB-203ENST00000514133 ARID3CA6NKF2 412 aa7.1□□□□□ -1.27
SGCB-203ENST00000514133 SMAPO00193 183 aa7.1□□□□□ -1.27
SGCB-203ENST00000514133 APBB1O00213 710 aa7.09□□□□□ -1.27
SGCB-203ENST00000514133 FLIIQ13045 1269 aa7.09□□□□□ -1.27
SGCB-203ENST00000514133 TMEM134Q9H6X4 195 aa7.09□□□□□ -1.27
SGCB-203ENST00000514133 A0A0G2JS52 829 aa7.08□□□□□ -1.28
SGCB-203ENST00000514133 SWT1Q5T5J6 900 aaKnown RBP7.08□□□□□ -1.28
SGCB-203ENST00000514133 C1orf115Q9H7X2 142 aa7.08□□□□□ -1.28
SGCB-203ENST00000514133 C3orf80F5H4A9 247 aa7.07□□□□□ -1.28
SGCB-203ENST00000514133 TRIM26Q12899 539 aaPredicted RBP7.07□□□□□ -1.28
SGCB-203ENST00000514133 PXYLP1Q8TE99 480 aa7.07□□□□□ -1.28
SGCB-203ENST00000514133 IL21Q9HBE4 155 aa7.07□□□□□ -1.28
SGCB-203ENST00000514133 RCCD1A6NED2 376 aa7.06□□□□□ -1.28
SGCB-203ENST00000514133 KMT5BQ4FZB7 885 aa7.05□□□□□ -1.28
SGCB-203ENST00000514133 GIGYF2Q6Y7W6 1299 aaKnown RBP7.05□□□□□ -1.28
SGCB-203ENST00000514133 METTL3Q86U44 580 aaKnown RBP7.05□□□□□ -1.28
SGCB-203ENST00000514133 GOPCQ9HD26 462 aa7.05□□□□□ -1.28
SGCB-203ENST00000514133 PCMTD1Q96MG8 357 aaPredicted RBP7.04□□□□□ -1.28
SGCB-203ENST00000514133 RNF40O75150 1001 aa7.03□□□□□ -1.28
SGCB-203ENST00000514133 MS4A1P11836 297 aa7.03□□□□□ -1.28
SGCB-203ENST00000514133 TJAP1Q5JTD0 557 aa7.03□□□□□ -1.28
SGCB-203ENST00000514133 SULF1Q8IWU6 871 aa7.02□□□□□ -1.29
SGCB-203ENST00000514133 CLUAP1Q96AJ1 413 aa7.02□□□□□ -1.29
SGCB-203ENST00000514133 ATP1B4Q9UN42 357 aaPredicted RBP7.02□□□□□ -1.29
SGCB-203ENST00000514133 ACTN4O43707 911 aaKnown RBP7.01□□□□□ -1.29
SGCB-203ENST00000514133 HRCP23327 699 aa7.01□□□□□ -1.29
SGCB-203ENST00000514133 APLP1P51693 650 aa7.01□□□□□ -1.29
SGCB-203ENST00000514133 MTRQ99707 1265 aa7.01□□□□□ -1.29
SGCB-203ENST00000514133 REPIN1Q9BWE0 567 aaKnown RBP7.01□□□□□ -1.29
SGCB-203ENST00000514133 GGCXP38435 758 aa7□□□□□ -1.29
SGCB-203ENST00000514133 TMUB1Q9BVT8 246 aa7□□□□□ -1.29
SGCB-203ENST00000514133 RANGAP1P46060 587 aaPredicted RBP6.99□□□□□ -1.29
SGCB-203ENST00000514133 PCDHB3Q9Y5E6 796 aa6.99□□□□□ -1.29
SGCB-203ENST00000514133 A6NJR5 290 aa6.98□□□□□ -1.29
SGCB-203ENST00000514133 TRAK2O60296 914 aa6.98□□□□□ -1.29
SGCB-203ENST00000514133 ZPR1O75312 459 aa6.97□□□□□ -1.29
SGCB-203ENST00000514133 NR1I2O75469 434 aa6.97□□□□□ -1.29
SGCB-203ENST00000514133 CLCN1P35523 988 aa6.97□□□□□ -1.29
SGCB-203ENST00000514133 CCDC82Q8N4S0 544 aa6.97□□□□□ -1.29
SGCB-203ENST00000514133 CFHP08603 1231 aa6.96□□□□□ -1.3
SGCB-203ENST00000514133 PDIA4P13667 645 aaKnown RBP6.96□□□□□ -1.3
SGCB-203ENST00000514133 MDM2Q00987 491 aaPredicted RBP6.96□□□□□ -1.3
SGCB-203ENST00000514133 SH3D19Q5HYK7 790 aa6.96□□□□□ -1.3
SGCB-203ENST00000514133 GPCPD1Q9NPB8 672 aa6.96□□□□□ -1.3
SGCB-203ENST00000514133 SSTR3P32745 418 aaPredicted RBP6.95□□□□□ -1.3
SGCB-203ENST00000514133 MCM6Q14566 821 aa6.95□□□□□ -1.3
SGCB-203ENST00000514133 FAM161AQ3B820 660 aa6.95□□□□□ -1.3
SGCB-203ENST00000514133 GRIPAP1Q4V328 841 aa6.95□□□□□ -1.3
SGCB-203ENST00000514133 SLC10A3P09131 477 aa6.94□□□□□ -1.3
SGCB-203ENST00000514133 SKIV2LQ15477 1246 aaKnown RBP6.94□□□□□ -1.3
SGCB-203ENST00000514133 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.94□□□□□ -1.3
SGCB-203ENST00000514133 V9GY48 417 aaPredicted RBP6.94□□□□□ -1.3
SGCB-203ENST00000514133 LAPTM4AQ15012 233 aa6.93□□□□□ -1.3
SGCB-203ENST00000514133 PHOX2BQ99453 314 aa6.93□□□□□ -1.3
SGCB-203ENST00000514133 BEGAINQ9BUH8 593 aa6.93□□□□□ -1.3
SGCB-203ENST00000514133 ZNF777Q9ULD5 760 aaPredicted RBP6.93□□□□□ -1.3
SGCB-203ENST00000514133 SALL2Q9Y467 1007 aaPredicted RBP6.93□□□□□ -1.3
SGCB-203ENST00000514133 ZBTB7CA1YPR0 619 aa6.92□□□□□ -1.3
SGCB-203ENST00000514133 PROCA1Q8NCQ7 364 aaPredicted RBP6.92□□□□□ -1.3
SGCB-203ENST00000514133 POLR3EQ9NVU0 708 aa6.92□□□□□ -1.3
SGCB-203ENST00000514133 RAD21O60216 631 aa6.91□□□□□ -1.3
SGCB-203ENST00000514133 ATP6V1AP38606 617 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms