RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 TMEM134Q9H6X4 195 aa8.67□□□□□ -1.02
NIPBL-207ENST00000513819 ONECUT3O60422 494 aaPredicted RBP8.66□□□□□ -1.02
NIPBL-207ENST00000513819 CD46P15529 392 aa8.66□□□□□ -1.02
NIPBL-207ENST00000513819 ARHGAP33O14559 1287 aa8.65□□□□□ -1.02
NIPBL-207ENST00000513819 CLK2P49760 499 aaKnown RBP8.65□□□□□ -1.02
NIPBL-207ENST00000513819 EMP3P54852 163 aa8.65□□□□□ -1.02
NIPBL-207ENST00000513819 DMRTA1Q5VZB9 504 aa8.65□□□□□ -1.02
NIPBL-207ENST00000513819 SULF1Q8IWU6 871 aa8.64□□□□□ -1.03
NIPBL-207ENST00000513819 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
NIPBL-207ENST00000513819 ZMYND15Q9H091 742 aa8.64□□□□□ -1.03
NIPBL-207ENST00000513819 FAM205CA6NFA0 338 aa8.63□□□□□ -1.03
NIPBL-207ENST00000513819 FLIIQ13045 1269 aa8.63□□□□□ -1.03
NIPBL-207ENST00000513819 SEPT9Q9UHD8 586 aaPredicted RBP8.63□□□□□ -1.03
NIPBL-207ENST00000513819 DIXDC1Q155Q3 683 aa8.62□□□□□ -1.03
NIPBL-207ENST00000513819 RDH13Q8NBN7 331 aa8.62□□□□□ -1.03
NIPBL-207ENST00000513819 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
NIPBL-207ENST00000513819 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
NIPBL-207ENST00000513819 RABGEF1Q9UJ41 708 aa8.62□□□□□ -1.03
NIPBL-207ENST00000513819 NUTM1Q86Y26 1132 aa8.61□□□□□ -1.03
NIPBL-207ENST00000513819 SWT1Q5T5J6 900 aaKnown RBP8.6□□□□□ -1.03
NIPBL-207ENST00000513819 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-207ENST00000513819 RIC3Q7Z5B4 369 aa8.6□□□□□ -1.03
NIPBL-207ENST00000513819 SLC4A5Q9BY07 1137 aa8.6□□□□□ -1.03
NIPBL-207ENST00000513819 PBX2P40425 430 aa8.59□□□□□ -1.03
NIPBL-207ENST00000513819 ZNF687Q8N1G0 1237 aa8.59□□□□□ -1.03
NIPBL-207ENST00000513819 VPS9D1Q9Y2B5 631 aa8.59□□□□□ -1.03
NIPBL-207ENST00000513819 POTEB3A0JP26 581 aa8.58□□□□□ -1.04
NIPBL-207ENST00000513819 MOXD2PA6NHM9 499 aa8.58□□□□□ -1.04
NIPBL-207ENST00000513819 NDUFV2P19404 249 aa8.58□□□□□ -1.04
NIPBL-207ENST00000513819 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
NIPBL-207ENST00000513819 POTEBQ6S5H4 581 aa8.58□□□□□ -1.04
NIPBL-207ENST00000513819 SPTLC1O15269 473 aa8.57□□□□□ -1.04
NIPBL-207ENST00000513819 SLC10A3P09131 477 aa8.57□□□□□ -1.04
NIPBL-207ENST00000513819 MCM6Q14566 821 aa8.57□□□□□ -1.04
NIPBL-207ENST00000513819 RSBN1LQ6PCB5 846 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-207ENST00000513819 RFC5P40937 340 aa8.56□□□□□ -1.04
NIPBL-207ENST00000513819 HS3ST6Q96QI5 342 aa8.56□□□□□ -1.04
NIPBL-207ENST00000513819 KDM4AO75164 1064 aa8.55□□□□□ -1.04
NIPBL-207ENST00000513819 GCGRP47871 477 aa8.55□□□□□ -1.04
NIPBL-207ENST00000513819 FAM98CQ17RN3 349 aaKnown RBP8.55□□□□□ -1.04
NIPBL-207ENST00000513819 CLUAP1Q96AJ1 413 aa8.55□□□□□ -1.04
NIPBL-207ENST00000513819 PCDHB15Q9Y5E8 787 aa8.55□□□□□ -1.04
NIPBL-207ENST00000513819 UBTFP17480 764 aaKnown RBP8.54□□□□□ -1.04
NIPBL-207ENST00000513819 HDGFP51858 240 aaKnown RBP8.54□□□□□ -1.04
NIPBL-207ENST00000513819 RSPH4AQ5TD94 716 aa8.54□□□□□ -1.04
NIPBL-207ENST00000513819 SAMD7Q7Z3H4 446 aa8.54□□□□□ -1.04
NIPBL-207ENST00000513819 MMRN1Q13201 1228 aa8.53□□□□□ -1.04
NIPBL-207ENST00000513819 QPCTQ16769 361 aa8.53□□□□□ -1.04
NIPBL-207ENST00000513819 TUSC1Q2TAM9 212 aa8.53□□□□□ -1.04
NIPBL-207ENST00000513819 PPP2R2DQ66LE6 453 aa8.53□□□□□ -1.04
NIPBL-207ENST00000513819 BHMG1C9JSJ3 638 aaPredicted RBP8.52□□□□□ -1.05
NIPBL-207ENST00000513819 HOXA2O43364 376 aa8.52□□□□□ -1.05
NIPBL-207ENST00000513819 RNF40O75150 1001 aa8.52□□□□□ -1.05
NIPBL-207ENST00000513819 HLA-CQ95604 372 aa8.52□□□□□ -1.05
NIPBL-207ENST00000513819 NBPF3Q9H094 633 aa8.52□□□□□ -1.05
NIPBL-207ENST00000513819 GUCA2AQ02747 115 aa8.51□□□□□ -1.05
NIPBL-207ENST00000513819 LAPTM4BQ86VI4 370 aa8.51□□□□□ -1.05
NIPBL-207ENST00000513819 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
NIPBL-207ENST00000513819 SNRKQ9NRH2 765 aa8.51□□□□□ -1.05
NIPBL-207ENST00000513819 LILRB3O75022 631 aa8.5□□□□□ -1.05
NIPBL-207ENST00000513819 GJA5P36382 358 aa8.5□□□□□ -1.05
NIPBL-207ENST00000513819 USP46P62068 366 aa8.5□□□□□ -1.05
NIPBL-207ENST00000513819 RTL5Q5HYW3 569 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-207ENST00000513819 SPNS2Q8IVW8 549 aa8.5□□□□□ -1.05
NIPBL-207ENST00000513819 SLF2Q8IX21 1173 aa8.5□□□□□ -1.05
NIPBL-207ENST00000513819 ZFRQ96KR1 1074 aaKnown RBP8.5□□□□□ -1.05
NIPBL-207ENST00000513819 TK2O00142 265 aa8.49□□□□□ -1.05
NIPBL-207ENST00000513819 FDX1P10109 184 aa8.49□□□□□ -1.05
NIPBL-207ENST00000513819 SLC4A3P48751 1232 aa8.49□□□□□ -1.05
NIPBL-207ENST00000513819 LSM11P83369 360 aaKnown RBP eCLIP8.49□□□□□ -1.05
NIPBL-207ENST00000513819 TMEM259Q4ZIN3 620 aa8.49□□□□□ -1.05
NIPBL-207ENST00000513819 ADGRD1Q6QNK2 874 aa8.49□□□□□ -1.05
NIPBL-207ENST00000513819 MRPL50Q8N5N7 158 aaKnown RBP8.49□□□□□ -1.05
NIPBL-207ENST00000513819 BANK1Q8NDB2 785 aa8.49□□□□□ -1.05
NIPBL-207ENST00000513819 POM121Q96HA1 1249 aa8.49□□□□□ -1.05
NIPBL-207ENST00000513819 SPDYE5A6NIY4 337 aa8.48□□□□□ -1.05
NIPBL-207ENST00000513819 A6NJR5 290 aa8.48□□□□□ -1.05
NIPBL-207ENST00000513819 ARID3CA6NKF2 412 aa8.48□□□□□ -1.05
NIPBL-207ENST00000513819 NUTM2BA6NNL0 878 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-207ENST00000513819 NUTM2EB1AL46 878 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-207ENST00000513819 CFHP08603 1231 aa8.48□□□□□ -1.05
NIPBL-207ENST00000513819 NUTM2DQ5VT03 806 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-207ENST00000513819 NUTM2AQ8IVF1 878 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-207ENST00000513819 PCDHGC3Q9UN70 934 aa8.48□□□□□ -1.05
NIPBL-207ENST00000513819 FUT2Q10981 343 aa8.47□□□□□ -1.05
NIPBL-207ENST00000513819 ARXQ96QS3 562 aa8.47□□□□□ -1.05
NIPBL-207ENST00000513819 C1orf115Q9H7X2 142 aa8.47□□□□□ -1.05
NIPBL-207ENST00000513819 AP1G2O75843 785 aa8.46□□□□□ -1.06
NIPBL-207ENST00000513819 HRCP23327 699 aa8.46□□□□□ -1.06
NIPBL-207ENST00000513819 PRPF38BQ5VTL8 546 aaKnown RBP8.46□□□□□ -1.06
NIPBL-207ENST00000513819 ZBTB3Q9H5J0 574 aa8.46□□□□□ -1.06
NIPBL-207ENST00000513819 HRO43593 1189 aa8.45□□□□□ -1.06
NIPBL-207ENST00000513819 TRAK2O60296 914 aa8.45□□□□□ -1.06
NIPBL-207ENST00000513819 ANKRD13DQ6ZTN6 518 aa8.45□□□□□ -1.06
NIPBL-207ENST00000513819 APBB1O00213 710 aa8.44□□□□□ -1.06
NIPBL-207ENST00000513819 RAD21O60216 631 aa8.44□□□□□ -1.06
NIPBL-207ENST00000513819 MTMR14Q8NCE2 650 aa8.44□□□□□ -1.06
NIPBL-207ENST00000513819 LRCH3Q96II8 777 aa8.44□□□□□ -1.06
NIPBL-207ENST00000513819 COG6Q9Y2V7 657 aa8.44□□□□□ -1.06
NIPBL-207ENST00000513819 PROSER2Q86WR7 435 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms