RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 KDM5AP29375 1690 aaKnown RBP10.98□□□□□ -0.65
HTT-212ENST00000513639 MSH5O43196 834 aa10.97□□□□□ -0.65
HTT-212ENST00000513639 TRIM52Q96A61 297 aa10.97□□□□□ -0.65
HTT-212ENST00000513639 RRBP1Q9P2E9 1410 aaKnown RBP10.97□□□□□ -0.65
HTT-212ENST00000513639 PIK3C2BO00750 1634 aa10.97□□□□□ -0.65
HTT-212ENST00000513639 RIMS2Q9UQ26 1411 aa10.96□□□□□ -0.65
HTT-212ENST00000513639 PLEKHG1Q9ULL1 1385 aa10.96□□□□□ -0.65
HTT-212ENST00000513639 ZNF326Q5BKZ1 582 aaKnown RBP10.96□□□□□ -0.65
HTT-212ENST00000513639 SYNMO15061 1565 aa10.95□□□□□ -0.66
HTT-212ENST00000513639 ACIN1Q9UKV3 1341 aaKnown RBP10.95□□□□□ -0.66
HTT-212ENST00000513639 TET3O43151 1660 aa10.95□□□□□ -0.66
HTT-212ENST00000513639 TMEM94Q12767 1356 aa10.94□□□□□ -0.66
HTT-212ENST00000513639 NCBP3Q53F19 620 aaKnown RBP10.94□□□□□ -0.66
HTT-212ENST00000513639 NUTM2DQ5VT03 806 aaPredicted RBP10.94□□□□□ -0.66
HTT-212ENST00000513639 ADGRB3O60242 1522 aa10.94□□□□□ -0.66
HTT-212ENST00000513639 ZFYVE9O95405 1425 aa10.93□□□□□ -0.66
HTT-212ENST00000513639 SLC4A1APQ9BWU0 796 aaKnown RBP10.93□□□□□ -0.66
HTT-212ENST00000513639 SLAIN2Q9P270 581 aa10.93□□□□□ -0.66
HTT-212ENST00000513639 UNC13BO14795 1591 aa10.93□□□□□ -0.66
HTT-212ENST00000513639 SOCS7O14512 581 aa10.92□□□□□ -0.66
HTT-212ENST00000513639 ILDR2Q71H61 639 aa10.92□□□□□ -0.66
HTT-212ENST00000513639 C14orf37Q86TY3 774 aa10.92□□□□□ -0.66
HTT-212ENST00000513639 NAIPQ13075 1403 aa10.92□□□□□ -0.66
HTT-212ENST00000513639 FAM135BQ49AJ0 1406 aa10.92□□□□□ -0.66
HTT-212ENST00000513639 MSH6P52701 1360 aa10.91□□□□□ -0.66
HTT-212ENST00000513639 PIK3R4Q99570 1358 aa10.91□□□□□ -0.66
HTT-212ENST00000513639 VGFO15240 615 aaPredicted RBP10.91□□□□□ -0.66
HTT-212ENST00000513639 RBM33Q96EV2 1170 aaKnown RBP10.91□□□□□ -0.66
HTT-212ENST00000513639 C19orf44Q9H6X5 657 aa10.91□□□□□ -0.66
HTT-212ENST00000513639 NCOA3Q9Y6Q9 1424 aa10.91□□□□□ -0.66
HTT-212ENST00000513639 IQGAP3Q86VI3 1631 aa10.91□□□□□ -0.66
HTT-212ENST00000513639 GCC2Q8IWJ2 1684 aa10.9□□□□□ -0.66
HTT-212ENST00000513639 ATF3P18847 181 aa10.9□□□□□ -0.66
HTT-212ENST00000513639 CADPS2Q86UW7 1296 aa10.9□□□□□ -0.66
HTT-212ENST00000513639 AMOTL2Q9Y2J4 779 aa10.9□□□□□ -0.66
HTT-212ENST00000513639 RPGRIP1LQ68CZ1 1315 aa10.89□□□□□ -0.67
HTT-212ENST00000513639 TMEM131LA2VDJ0 1609 aa10.89□□□□□ -0.67
HTT-212ENST00000513639 HFM1A2PYH4 1435 aa10.89□□□□□ -0.67
HTT-212ENST00000513639 NKTRP30414 1462 aaKnown RBP10.88□□□□□ -0.67
HTT-212ENST00000513639 E9PCH4 1651 aa10.88□□□□□ -0.67
HTT-212ENST00000513639 STRCP1A6NGW2 1772 aa10.88□□□□□ -0.67
HTT-212ENST00000513639 ADAMTS13Q76LX8 1427 aa10.85□□□□□ -0.67
HTT-212ENST00000513639 MPHOSPH9Q99550 1183 aa10.85□□□□□ -0.67
HTT-212ENST00000513639 ALKQ9UM73 1620 aa10.84□□□□□ -0.67
HTT-212ENST00000513639 DIP2AQ14689 1571 aa10.82□□□□□ -0.68
HTT-212ENST00000513639 NWD1Q149M9 1564 aa10.81□□□□□ -0.68
HTT-212ENST00000513639 METP08581 1390 aa10.8□□□□□ -0.68
HTT-212ENST00000513639 TRPM2O94759 1503 aa10.8□□□□□ -0.68
HTT-212ENST00000513639 CHD2O14647 1828 aaKnown RBP10.8□□□□□ -0.68
HTT-212ENST00000513639 RGL3Q3MIN7 710 aa10.8□□□□□ -0.68
HTT-212ENST00000513639 MYO5BQ9ULV0 1848 aa10.79□□□□□ -0.68
HTT-212ENST00000513639 JCADQ9P266 1359 aa10.78□□□□□ -0.68
HTT-212ENST00000513639 CCDC144AA2RUR9 1427 aa10.78□□□□□ -0.68
HTT-212ENST00000513639 PTPRUQ92729 1446 aa10.78□□□□□ -0.68
HTT-212ENST00000513639 SETD5Q9C0A6 1442 aa10.78□□□□□ -0.68
HTT-212ENST00000513639 HRCP23327 699 aa10.78□□□□□ -0.68
HTT-212ENST00000513639 XIRP1Q702N8 1843 aaKnown RBP10.78□□□□□ -0.68
HTT-212ENST00000513639 SPHKAPQ2M3C7 1700 aa10.78□□□□□ -0.68
HTT-212ENST00000513639 MED1Q15648 1581 aaPredicted RBP10.77□□□□□ -0.68
HTT-212ENST00000513639 SETBP1Q9Y6X0 1596 aa10.77□□□□□ -0.68
HTT-212ENST00000513639 BRINP3Q76B58 766 aa10.77□□□□□ -0.69
HTT-212ENST00000513639 LRRC59Q96AG4 307 aaKnown RBP10.77□□□□□ -0.69
HTT-212ENST00000513639 ANKRD30BQ9BXX2 1392 aa10.77□□□□□ -0.69
HTT-212ENST00000513639 DCCP43146 1447 aa10.76□□□□□ -0.69
HTT-212ENST00000513639 RGS17Q9UGC6 210 aaPredicted RBP10.76□□□□□ -0.69
HTT-212ENST00000513639 SPATA31A6Q5VVP1 1343 aa10.76□□□□□ -0.69
HTT-212ENST00000513639 CLTCL1P53675 1640 aa10.74□□□□□ -0.69
HTT-212ENST00000513639 ROBO1Q9Y6N7 1651 aa10.74□□□□□ -0.69
HTT-212ENST00000513639 MEX3CQ5U5Q3 659 aaKnown RBP10.74□□□□□ -0.69
HTT-212ENST00000513639 NEXMIFQ5QGS0 1516 aa10.74□□□□□ -0.69
HTT-212ENST00000513639 KIF1BO60333 1816 aa10.73□□□□□ -0.69
HTT-212ENST00000513639 STAC3Q96MF2 364 aa10.73□□□□□ -0.69
HTT-212ENST00000513639 ADGRF5Q8IZF2 1346 aa10.73□□□□□ -0.69
HTT-212ENST00000513639 ZNF772Q68DY9 489 aaPredicted RBP10.72□□□□□ -0.69
HTT-212ENST00000513639 SIRT1Q96EB6 747 aa10.72□□□□□ -0.69
HTT-212ENST00000513639 STK26Q9P289 416 aa10.72□□□□□ -0.69
HTT-212ENST00000513639 POTEAQ6S8J7 498 aa10.71□□□□□ -0.69
HTT-212ENST00000513639 CNKSR2Q8WXI2 1034 aa10.71□□□□□ -0.69
HTT-212ENST00000513639 C14orf93Q9H972 538 aaKnown RBP10.71□□□□□ -0.69
HTT-212ENST00000513639 ADGRL3Q9HAR2 1447 aa10.71□□□□□ -0.69
HTT-212ENST00000513639 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.71□□□□□ -0.69
HTT-212ENST00000513639 PTCH1Q13635 1447 aa10.7□□□□□ -0.7
HTT-212ENST00000513639 SPATA31E1Q6ZUB1 1445 aa10.7□□□□□ -0.7
HTT-212ENST00000513639 ABCC11Q96J66 1382 aa10.7□□□□□ -0.7
HTT-212ENST00000513639 RAB3GAP2Q9H2M9 1393 aa10.7□□□□□ -0.7
HTT-212ENST00000513639 ROBO2Q9HCK4 1378 aa10.7□□□□□ -0.7
HTT-212ENST00000513639 TMEM132EQ6IEE7 984 aa10.7□□□□□ -0.7
HTT-212ENST00000513639 NRXN3Q9Y4C0 1643 aa10.69□□□□□ -0.7
HTT-212ENST00000513639 MST1RQ04912 1400 aa10.69□□□□□ -0.7
HTT-212ENST00000513639 NUTM2BA6NNL0 878 aaPredicted RBP10.69□□□□□ -0.7
HTT-212ENST00000513639 NUTM2EB1AL46 878 aaPredicted RBP10.69□□□□□ -0.7
HTT-212ENST00000513639 NPM3O75607 178 aaKnown RBP10.69□□□□□ -0.7
HTT-212ENST00000513639 ESCO1Q5FWF5 840 aa10.69□□□□□ -0.7
HTT-212ENST00000513639 NUTM2AQ8IVF1 878 aaPredicted RBP10.69□□□□□ -0.7
HTT-212ENST00000513639 DHX57Q6P158 1386 aaKnown RBP10.68□□□□□ -0.7
HTT-212ENST00000513639 WAPLQ7Z5K2 1190 aa10.68□□□□□ -0.7
HTT-212ENST00000513639 ORAI2Q96SN7 254 aa10.68□□□□□ -0.7
HTT-212ENST00000513639 C1orf167Q5SNV9 1468 aa10.68□□□□□ -0.7
HTT-212ENST00000513639 PRAG1Q86YV5 1406 aa10.67□□□□□ -0.7
HTT-212ENST00000513639 PHLPP1O60346 1717 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms