RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 CENPQQ7L2Z9 268 aaPredicted RBP17.57■□□□□ 0.4
AP001999.1-201ENST00000513405 FAM161AQ3B820 660 aa17.56■□□□□ 0.4
AP001999.1-201ENST00000513405 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
AP001999.1-201ENST00000513405 TCP11L2Q8N4U5 519 aa17.55■□□□□ 0.4
AP001999.1-201ENST00000513405 TSR2Q969E8 191 aaKnown RBP17.55■□□□□ 0.4
AP001999.1-201ENST00000513405 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
AP001999.1-201ENST00000513405 TARBP1Q13395 1621 aaKnown RBP17.55■□□□□ 0.4
AP001999.1-201ENST00000513405 DUSP27Q5VZP5 1158 aa17.55■□□□□ 0.4
AP001999.1-201ENST00000513405 TNNQ9UQP3 1299 aa17.55■□□□□ 0.4
AP001999.1-201ENST00000513405 MFAP1P55081 439 aaKnown RBP17.54■□□□□ 0.4
AP001999.1-201ENST00000513405 SMC4Q9NTJ3 1288 aa17.54■□□□□ 0.4
AP001999.1-201ENST00000513405 FOXD4L1Q9NU39 408 aa17.53■□□□□ 0.4
AP001999.1-201ENST00000513405 FBLN1P23142 703 aa17.53■□□□□ 0.4
AP001999.1-201ENST00000513405 NFKBIBQ15653 356 aa17.53■□□□□ 0.4
AP001999.1-201ENST00000513405 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
AP001999.1-201ENST00000513405 FRAT2O75474 233 aaPredicted RBP17.52■□□□□ 0.4
AP001999.1-201ENST00000513405 BRPF3Q9ULD4 1205 aa17.52■□□□□ 0.4
AP001999.1-201ENST00000513405 E9PSI1 815 aa17.51■□□□□ 0.39
AP001999.1-201ENST00000513405 DNMT1P26358 1616 aaKnown RBP17.51■□□□□ 0.39
AP001999.1-201ENST00000513405 RAPGEF3O95398 923 aa17.51■□□□□ 0.39
AP001999.1-201ENST00000513405 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
AP001999.1-201ENST00000513405 MS4A1P11836 297 aa17.5■□□□□ 0.39
AP001999.1-201ENST00000513405 TPRNQ4KMQ1 711 aa17.5■□□□□ 0.39
AP001999.1-201ENST00000513405 AMER1Q5JTC6 1135 aaPredicted RBP17.5■□□□□ 0.39
AP001999.1-201ENST00000513405 RALGAPBQ86X10 1494 aa17.49■□□□□ 0.39
AP001999.1-201ENST00000513405 SLFN5Q08AF3 891 aa17.49■□□□□ 0.39
AP001999.1-201ENST00000513405 PRAG1Q86YV5 1406 aa17.49■□□□□ 0.39
AP001999.1-201ENST00000513405 BECN1Q14457 450 aa17.49■□□□□ 0.39
AP001999.1-201ENST00000513405 IGHDP01880 384 aa17.48■□□□□ 0.39
AP001999.1-201ENST00000513405 ESF1Q9H501 851 aaKnown RBP17.48■□□□□ 0.39
AP001999.1-201ENST00000513405 PARD3Q8TEW0 1356 aa17.47■□□□□ 0.39
AP001999.1-201ENST00000513405 EIF3AQ14152 1382 aaKnown RBP17.46■□□□□ 0.39
AP001999.1-201ENST00000513405 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
AP001999.1-201ENST00000513405 SYCP2Q9BX26 1530 aa17.46■□□□□ 0.38
AP001999.1-201ENST00000513405 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
AP001999.1-201ENST00000513405 HMOX1P09601 288 aa17.45■□□□□ 0.38
AP001999.1-201ENST00000513405 CARD14Q9BXL6 1004 aa17.45■□□□□ 0.38
AP001999.1-201ENST00000513405 GCC2Q8IWJ2 1684 aa17.45■□□□□ 0.38
AP001999.1-201ENST00000513405 WWC1Q8IX03 1113 aa17.44■□□□□ 0.38
AP001999.1-201ENST00000513405 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
AP001999.1-201ENST00000513405 EIF4G3O43432 1585 aaKnown RBP17.44■□□□□ 0.38
AP001999.1-201ENST00000513405 LRPPRCP42704 1394 aaKnown RBP17.44■□□□□ 0.38
AP001999.1-201ENST00000513405 RNF123Q5XPI4 1314 aa17.43■□□□□ 0.38
AP001999.1-201ENST00000513405 FAM135AQ9P2D6 1515 aa17.43■□□□□ 0.38
AP001999.1-201ENST00000513405 TRAPPC8Q9Y2L5 1435 aa17.43■□□□□ 0.38
AP001999.1-201ENST00000513405 GSE1Q14687 1217 aa17.42■□□□□ 0.38
AP001999.1-201ENST00000513405 A2MP01023 1474 aa17.41■□□□□ 0.38
AP001999.1-201ENST00000513405 EXOSC9Q06265 439 aaKnown RBP17.4■□□□□ 0.38
AP001999.1-201ENST00000513405 RUNDC1Q96C34 613 aa17.4■□□□□ 0.38
AP001999.1-201ENST00000513405 THUMPD2Q9BTF0 503 aaKnown RBP17.4■□□□□ 0.38
AP001999.1-201ENST00000513405 CEP170Q5SW79 1584 aa17.4■□□□□ 0.38
AP001999.1-201ENST00000513405 CYB5RLQ6IPT4 315 aa17.4■□□□□ 0.38
AP001999.1-201ENST00000513405 RWDD1Q9H446 243 aaPredicted RBP17.4■□□□□ 0.38
AP001999.1-201ENST00000513405 CGNL1Q0VF96 1302 aa17.39■□□□□ 0.37
AP001999.1-201ENST00000513405 SEC24BO95487 1268 aa17.39■□□□□ 0.37
AP001999.1-201ENST00000513405 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
AP001999.1-201ENST00000513405 RIPK4P57078 832 aa17.39■□□□□ 0.37
AP001999.1-201ENST00000513405 C14orf37Q86TY3 774 aa17.39■□□□□ 0.37
AP001999.1-201ENST00000513405 MYH16Q9H6N6 1097 aa17.39■□□□□ 0.37
AP001999.1-201ENST00000513405 PDZRN3Q9UPQ7 1066 aa17.39■□□□□ 0.37
AP001999.1-201ENST00000513405 LNPKQ9C0E8 428 aa17.39■□□□□ 0.37
AP001999.1-201ENST00000513405 RLBP1P12271 317 aa17.36■□□□□ 0.37
AP001999.1-201ENST00000513405 NCLP19338 710 aaKnown RBP17.35■□□□□ 0.37
AP001999.1-201ENST00000513405 NSD3Q9BZ95 1437 aa17.35■□□□□ 0.37
AP001999.1-201ENST00000513405 ZKSCAN2Q63HK3 967 aa17.35■□□□□ 0.37
AP001999.1-201ENST00000513405 NAP1L5Q96NT1 182 aaPredicted RBP17.34■□□□□ 0.37
AP001999.1-201ENST00000513405 UHRF1BP1Q6BDS2 1440 aa17.34■□□□□ 0.37
AP001999.1-201ENST00000513405 DZIP1LQ8IYY4 767 aaKnown RBP17.34■□□□□ 0.37
AP001999.1-201ENST00000513405 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
AP001999.1-201ENST00000513405 EVC2Q86UK5 1308 aa17.34■□□□□ 0.37
AP001999.1-201ENST00000513405 PRAM1Q96QH2 718 aa17.34■□□□□ 0.37
AP001999.1-201ENST00000513405 PCDHB15Q9Y5E8 787 aa17.33■□□□□ 0.37
AP001999.1-201ENST00000513405 MBD5Q9P267 1494 aa17.33■□□□□ 0.36
AP001999.1-201ENST00000513405 ANKRD45Q5TZF3 282 aa17.32■□□□□ 0.36
AP001999.1-201ENST00000513405 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
AP001999.1-201ENST00000513405 C8orf34Q49A92 452 aa17.32■□□□□ 0.36
AP001999.1-201ENST00000513405 ARID3AQ99856 593 aa17.32■□□□□ 0.36
AP001999.1-201ENST00000513405 ADGRL2O95490 1459 aa17.32■□□□□ 0.36
AP001999.1-201ENST00000513405 PLA2R1Q13018 1463 aa17.31■□□□□ 0.36
AP001999.1-201ENST00000513405 VGFO15240 615 aaPredicted RBP17.31■□□□□ 0.36
AP001999.1-201ENST00000513405 HSP90AB1P08238 724 aaKnown RBP17.31■□□□□ 0.36
AP001999.1-201ENST00000513405 RARSP54136 660 aaKnown RBP17.31■□□□□ 0.36
AP001999.1-201ENST00000513405 KDM5CP41229 1560 aa17.31■□□□□ 0.36
AP001999.1-201ENST00000513405 CABP1Q9NZU7 370 aa17.31■□□□□ 0.36
AP001999.1-201ENST00000513405 FBXO31Q5XUX0 539 aaPredicted RBP17.29■□□□□ 0.36
AP001999.1-201ENST00000513405 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
AP001999.1-201ENST00000513405 NOB1Q9ULX3 412 aaKnown RBP17.29■□□□□ 0.36
AP001999.1-201ENST00000513405 NUP160Q12769 1436 aa17.29■□□□□ 0.36
AP001999.1-201ENST00000513405 ABCC10Q5T3U5 1492 aa17.29■□□□□ 0.36
AP001999.1-201ENST00000513405 WAPLQ7Z5K2 1190 aa17.28■□□□□ 0.36
AP001999.1-201ENST00000513405 MAGI2Q86UL8 1455 aa17.28■□□□□ 0.36
AP001999.1-201ENST00000513405 USP35Q9P2H5 1018 aa17.28■□□□□ 0.36
AP001999.1-201ENST00000513405 NECTIN2Q92692 538 aa17.28■□□□□ 0.36
AP001999.1-201ENST00000513405 NOS1P29475 1434 aa17.27■□□□□ 0.36
AP001999.1-201ENST00000513405 ITSN2Q9NZM3 1697 aa17.27■□□□□ 0.36
AP001999.1-201ENST00000513405 DIAPH1O60610 1272 aaKnown RBP17.27■□□□□ 0.36
AP001999.1-201ENST00000513405 FOXD4L5Q5VV16 416 aaPredicted RBP17.27■□□□□ 0.36
AP001999.1-201ENST00000513405 HSCBQ8IWL3 235 aa17.27■□□□□ 0.36
AP001999.1-201ENST00000513405 FOXD4L4Q8WXT5 416 aaPredicted RBP17.27■□□□□ 0.36
AP001999.1-201ENST00000513405 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms