RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 LRP5O75197 1615 aa15.78■□□□□ 0.12
PTPN20-228ENST00000513266 MAST1Q9Y2H9 1570 aa15.78■□□□□ 0.12
PTPN20-228ENST00000513266 EFCAB6Q5THR3 1501 aa15.78■□□□□ 0.12
PTPN20-228ENST00000513266 MTUS2Q5JR59 1369 aa15.76■□□□□ 0.11
PTPN20-228ENST00000513266 ARHGEF5Q12774 1597 aa15.75■□□□□ 0.11
PTPN20-228ENST00000513266 ARHGAP31Q2M1Z3 1444 aa15.74■□□□□ 0.11
PTPN20-228ENST00000513266 RSPH4AQ5TD94 716 aa15.72■□□□□ 0.11
PTPN20-228ENST00000513266 C8orf37Q96NL8 207 aa15.72■□□□□ 0.11
PTPN20-228ENST00000513266 NHSL1Q5SYE7 1610 aa15.72■□□□□ 0.11
PTPN20-228ENST00000513266 EHBP1L1Q8N3D4 1523 aa15.71■□□□□ 0.11
PTPN20-228ENST00000513266 NCOA3Q9Y6Q9 1424 aa15.7■□□□□ 0.1
PTPN20-228ENST00000513266 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
PTPN20-228ENST00000513266 SETD5Q9C0A6 1442 aa15.69■□□□□ 0.1
PTPN20-228ENST00000513266 MYO5BQ9ULV0 1848 aa15.69■□□□□ 0.1
PTPN20-228ENST00000513266 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
PTPN20-228ENST00000513266 NGLY1Q96IV0 654 aa15.69■□□□□ 0.1
PTPN20-228ENST00000513266 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
PTPN20-228ENST00000513266 IDI1Q13907 227 aa15.67■□□□□ 0.1
PTPN20-228ENST00000513266 CADPS2Q86UW7 1296 aa15.67■□□□□ 0.1
PTPN20-228ENST00000513266 ADGRB3O60242 1522 aa15.67■□□□□ 0.1
PTPN20-228ENST00000513266 ASXL1Q8IXJ9 1541 aa15.67■□□□□ 0.1
PTPN20-228ENST00000513266 TSPY4P0CV99 314 aa15.66■□□□□ 0.1
PTPN20-228ENST00000513266 TSPY10P0CW01 314 aa15.66■□□□□ 0.1
PTPN20-228ENST00000513266 CCDC125Q86Z20 511 aa15.66■□□□□ 0.1
PTPN20-228ENST00000513266 C14orf37Q86TY3 774 aa15.65■□□□□ 0.1
PTPN20-228ENST00000513266 PNPLA6Q8IY17 1366 aa15.64■□□□□ 0.09
PTPN20-228ENST00000513266 ATF3P18847 181 aa15.64■□□□□ 0.09
PTPN20-228ENST00000513266 BCANQ96GW7 911 aa15.64■□□□□ 0.09
PTPN20-228ENST00000513266 C19orf44Q9H6X5 657 aa15.64■□□□□ 0.09
PTPN20-228ENST00000513266 PLEKHG1Q9ULL1 1385 aa15.61■□□□□ 0.09
PTPN20-228ENST00000513266 ZFYVE9O95405 1425 aa15.6■□□□□ 0.09
PTPN20-228ENST00000513266 DUOX2Q9NRD8 1548 aa15.6■□□□□ 0.09
PTPN20-228ENST00000513266 LRRC59Q96AG4 307 aaKnown RBP15.6■□□□□ 0.09
PTPN20-228ENST00000513266 ADAMTS2O95450 1211 aa15.59■□□□□ 0.09
PTPN20-228ENST00000513266 ATRNO75882 1429 aa15.59■□□□□ 0.09
PTPN20-228ENST00000513266 USP21Q9UK80 565 aa15.58■□□□□ 0.08
PTPN20-228ENST00000513266 TRPC5Q9UL62 973 aaPredicted RBP15.58■□□□□ 0.08
PTPN20-228ENST00000513266 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
PTPN20-228ENST00000513266 BRWD3Q6RI45 1802 aa15.57■□□□□ 0.08
PTPN20-228ENST00000513266 DDX17Q92841 729 aaKnown RBP15.56■□□□□ 0.08
PTPN20-228ENST00000513266 TBX22Q9Y458 520 aa15.56■□□□□ 0.08
PTPN20-228ENST00000513266 NOS1P29475 1434 aa15.56■□□□□ 0.08
PTPN20-228ENST00000513266 DCCP43146 1447 aa15.56■□□□□ 0.08
PTPN20-228ENST00000513266 BLMP54132 1417 aaPredicted RBP15.56■□□□□ 0.08
PTPN20-228ENST00000513266 MST1RQ04912 1400 aa15.56■□□□□ 0.08
PTPN20-228ENST00000513266 ADAMTS13Q76LX8 1427 aa15.55■□□□□ 0.08
PTPN20-228ENST00000513266 DEFB132Q7Z7B7 95 aa15.55■□□□□ 0.08
PTPN20-228ENST00000513266 LMTK2Q8IWU2 1503 aa15.53■□□□□ 0.08
PTPN20-228ENST00000513266 BCL9LQ86UU0 1499 aa15.53■□□□□ 0.08
PTPN20-228ENST00000513266 RIMS2Q9UQ26 1411 aa15.53■□□□□ 0.08
PTPN20-228ENST00000513266 FNBP4Q8N3X1 1017 aaPredicted RBP15.53■□□□□ 0.08
PTPN20-228ENST00000513266 MARF1Q9Y4F3 1742 aaKnown RBP15.53■□□□□ 0.08
PTPN20-228ENST00000513266 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.08
PTPN20-228ENST00000513266 TMEM131LA2VDJ0 1609 aa15.52■□□□□ 0.08
PTPN20-228ENST00000513266 LAMC1P11047 1609 aa15.51■□□□□ 0.07
PTPN20-228ENST00000513266 HRCP23327 699 aa15.51■□□□□ 0.07
PTPN20-228ENST00000513266 ERBINQ96RT1 1412 aa15.51■□□□□ 0.07
PTPN20-228ENST00000513266 PIK3R4Q99570 1358 aa15.5■□□□□ 0.07
PTPN20-228ENST00000513266 TRPM2O94759 1503 aa15.5■□□□□ 0.07
PTPN20-228ENST00000513266 PPP1R15AO75807 674 aaPredicted RBP15.5■□□□□ 0.07
PTPN20-228ENST00000513266 PTPRUQ92729 1446 aa15.5■□□□□ 0.07
PTPN20-228ENST00000513266 SPHKAPQ2M3C7 1700 aa15.49■□□□□ 0.07
PTPN20-228ENST00000513266 XRN1Q8IZH2 1706 aaKnown RBP15.49■□□□□ 0.07
PTPN20-228ENST00000513266 PSDA5PKW4 1024 aaPredicted RBP15.49■□□□□ 0.07
PTPN20-228ENST00000513266 YY1P25490 414 aa15.49■□□□□ 0.07
PTPN20-228ENST00000513266 SLC52A1Q9NWF4 448 aa15.49■□□□□ 0.07
PTPN20-228ENST00000513266 PTCH1Q13635 1447 aa15.49■□□□□ 0.07
PTPN20-228ENST00000513266 UNC13BO14795 1591 aa15.49■□□□□ 0.07
PTPN20-228ENST00000513266 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
PTPN20-228ENST00000513266 COL22A1Q8NFW1 1626 aaPredicted RBP15.48■□□□□ 0.07
PTPN20-228ENST00000513266 IFFO2Q5TF58 517 aa15.48■□□□□ 0.07
PTPN20-228ENST00000513266 KANK1Q14678 1352 aa15.48■□□□□ 0.07
PTPN20-228ENST00000513266 CROCC2H7BZ55 1655 aa15.48■□□□□ 0.07
PTPN20-228ENST00000513266 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.47■□□□□ 0.07
PTPN20-228ENST00000513266 GLI3P10071 1580 aa15.46■□□□□ 0.07
PTPN20-228ENST00000513266 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.07
PTPN20-228ENST00000513266 NALCNQ8IZF0 1738 aa15.46■□□□□ 0.06
PTPN20-228ENST00000513266 GJD4Q96KN9 370 aaPredicted RBP15.44■□□□□ 0.06
PTPN20-228ENST00000513266 HDGFP51858 240 aaKnown RBP15.43■□□□□ 0.06
PTPN20-228ENST00000513266 RRP7BPQ9NSQ0 103 aa15.42■□□□□ 0.06
PTPN20-228ENST00000513266 SOS2Q07890 1332 aaPredicted RBP15.42■□□□□ 0.06
PTPN20-228ENST00000513266 SF3B2Q13435 895 aaKnown RBP15.41■□□□□ 0.06
PTPN20-228ENST00000513266 MYOM2P54296 1465 aa15.4■□□□□ 0.06
PTPN20-228ENST00000513266 NRXN3Q9Y4C0 1643 aa15.4■□□□□ 0.06
PTPN20-228ENST00000513266 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.4■□□□□ 0.06
PTPN20-228ENST00000513266 ADGRL3Q9HAR2 1447 aa15.4■□□□□ 0.06
PTPN20-228ENST00000513266 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
PTPN20-228ENST00000513266 MYOM3Q5VTT5 1437 aa15.39■□□□□ 0.05
PTPN20-228ENST00000513266 RPRD2Q5VT52 1461 aaKnown RBP15.39■□□□□ 0.05
PTPN20-228ENST00000513266 C1orf167Q5SNV9 1468 aa15.38■□□□□ 0.05
PTPN20-228ENST00000513266 ABCC5O15440 1437 aa15.35■□□□□ 0.05
PTPN20-228ENST00000513266 R3HDM1Q15032 1099 aaKnown RBP15.33■□□□□ 0.04
PTPN20-228ENST00000513266 ORAI2Q96SN7 254 aa15.33■□□□□ 0.04
PTPN20-228ENST00000513266 SLIT2O94813 1529 aa15.33■□□□□ 0.04
PTPN20-228ENST00000513266 CHGAP10645 457 aaKnown RBP15.32■□□□□ 0.04
PTPN20-228ENST00000513266 BAG6P46379 1132 aa15.32■□□□□ 0.04
PTPN20-228ENST00000513266 PTPN23Q9H3S7 1636 aa15.32■□□□□ 0.04
PTPN20-228ENST00000513266 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
PTPN20-228ENST00000513266 SEPT12Q8IYM1 358 aa15.31■□□□□ 0.04
PTPN20-228ENST00000513266 UNC5CLQ8IV45 518 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms