RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 ATP6V1DQ9Y5K8 247 aa21.25■□□□□ 0.99
ARHGEF28-212ENST00000513042 USP35Q9P2H5 1018 aa21.25■□□□□ 0.99
ARHGEF28-212ENST00000513042 APAF1O14727 1248 aa21.24■□□□□ 0.99
ARHGEF28-212ENST00000513042 TPM1P09493 284 aa21.24■□□□□ 0.99
ARHGEF28-212ENST00000513042 MROH2BQ7Z745 1585 aa21.24■□□□□ 0.99
ARHGEF28-212ENST00000513042 SETQ01105 290 aaPredicted RBP21.24■□□□□ 0.99
ARHGEF28-212ENST00000513042 TEFQ10587 303 aa21.23■□□□□ 0.99
ARHGEF28-212ENST00000513042 TRIM29Q14134 588 aa21.23■□□□□ 0.99
ARHGEF28-212ENST00000513042 TTC5Q8N0Z6 440 aa21.22■□□□□ 0.99
ARHGEF28-212ENST00000513042 ZNF771Q7L3S4 317 aaPredicted RBP21.22■□□□□ 0.99
ARHGEF28-212ENST00000513042 IFIT2P09913 472 aaKnown RBP21.22■□□□□ 0.99
ARHGEF28-212ENST00000513042 RSPH6AQ9H0K4 717 aa21.22■□□□□ 0.99
ARHGEF28-212ENST00000513042 TCEAL9Q9UHQ7 104 aa21.21■□□□□ 0.99
ARHGEF28-212ENST00000513042 TRIM34Q9BYJ4 488 aa21.21■□□□□ 0.99
ARHGEF28-212ENST00000513042 EVC2Q86UK5 1308 aa21.21■□□□□ 0.99
ARHGEF28-212ENST00000513042 DHX16O60231 1041 aaKnown RBP21.2■□□□□ 0.98
ARHGEF28-212ENST00000513042 BICD2Q8TD16 824 aa21.19■□□□□ 0.98
ARHGEF28-212ENST00000513042 PRKRIP1Q9H875 184 aaPredicted RBP21.19■□□□□ 0.98
ARHGEF28-212ENST00000513042 NEXNQ0ZGT2 675 aa21.19■□□□□ 0.98
ARHGEF28-212ENST00000513042 USP47Q96K76 1375 aa21.19■□□□□ 0.98
ARHGEF28-212ENST00000513042 NOL10Q9BSC4 688 aaKnown RBP21.19■□□□□ 0.98
ARHGEF28-212ENST00000513042 RIPK4P57078 832 aa21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 SYTL4Q96C24 671 aaPredicted RBP21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 CCDC70Q6NSX1 233 aa21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 RUFY2Q8WXA3 655 aa21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 VSIG10Q8N0Z9 540 aa21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 PDS5BQ9NTI5 1447 aa21.18■□□□□ 0.98
ARHGEF28-212ENST00000513042 NFXL1Q6ZNB6 911 aa21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 AMOTL1Q8IY63 956 aa21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 RAPGEF2Q9Y4G8 1499 aa21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 CPLX1O14810 134 aa21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 ZKSCAN1P17029 563 aaPredicted RBP21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 ZBED9Q6R2W3 1325 aa21.17■□□□□ 0.98
ARHGEF28-212ENST00000513042 VPS37CA5D8V6 355 aaPredicted RBP21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 DHX57Q6P158 1386 aaKnown RBP21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 CTDP1Q9Y5B0 961 aaPredicted RBP21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 KDM4AO75164 1064 aa21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 HOMER1Q86YM7 354 aa21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 DDX19BQ9UMR2 479 aa21.16■□□□□ 0.98
ARHGEF28-212ENST00000513042 DIAPH1O60610 1272 aaKnown RBP21.15■□□□□ 0.98
ARHGEF28-212ENST00000513042 REC8O95072 547 aa21.15■□□□□ 0.98
ARHGEF28-212ENST00000513042 DZIP1LQ8IYY4 767 aaKnown RBP21.15■□□□□ 0.98
ARHGEF28-212ENST00000513042 VPS37DQ86XT2 251 aa21.15■□□□□ 0.98
ARHGEF28-212ENST00000513042 GPS2Q13227 327 aa21.14■□□□□ 0.97
ARHGEF28-212ENST00000513042 SAMD1Q6SPF0 538 aaPredicted RBP21.13■□□□□ 0.97
ARHGEF28-212ENST00000513042 FAM13BQ9NYF5 915 aa21.13■□□□□ 0.97
ARHGEF28-212ENST00000513042 FKBP5Q13451 457 aaPredicted RBP21.13■□□□□ 0.97
ARHGEF28-212ENST00000513042 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
ARHGEF28-212ENST00000513042 CHMP4CQ96CF2 233 aa21.12■□□□□ 0.97
ARHGEF28-212ENST00000513042 CPLX2Q6PUV4 134 aaKnown RBP21.12■□□□□ 0.97
ARHGEF28-212ENST00000513042 WIZO95785 1651 aa21.12■□□□□ 0.97
ARHGEF28-212ENST00000513042 G3BP1Q13283 466 aaKnown RBP eCLIP21.11■□□□□ 0.97
ARHGEF28-212ENST00000513042 RSPH4AQ5TD94 716 aa21.11■□□□□ 0.97
ARHGEF28-212ENST00000513042 HMOX1P09601 288 aa21.11■□□□□ 0.97
ARHGEF28-212ENST00000513042 LRRFIP1Q32MZ4 808 aaKnown RBP21.11■□□□□ 0.97
ARHGEF28-212ENST00000513042 FYB1O15117 783 aa21.1■□□□□ 0.97
ARHGEF28-212ENST00000513042 SMC3Q9UQE7 1217 aa21.1■□□□□ 0.97
ARHGEF28-212ENST00000513042 LNPKQ9C0E8 428 aa21.09■□□□□ 0.97
ARHGEF28-212ENST00000513042 CCDC47Q96A33 483 aaKnown RBP21.09■□□□□ 0.97
ARHGEF28-212ENST00000513042 VGFO15240 615 aaPredicted RBP21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 TRDNQ13061 729 aa21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 SASS6Q6UVJ0 657 aa21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 IPO7O95373 1038 aaKnown RBP21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 ANKRD20A12PQ8NF67 263 aa21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 SMARCA2P51531 1590 aa21.08■□□□□ 0.97
ARHGEF28-212ENST00000513042 CHMP5Q9NZZ3 219 aa21.08■□□□□ 0.96
ARHGEF28-212ENST00000513042 NAP1L1P55209 391 aaKnown RBP21.07■□□□□ 0.96
ARHGEF28-212ENST00000513042 ERICH2A1L162 156 aa21.07■□□□□ 0.96
ARHGEF28-212ENST00000513042 AIMP1Q12904 312 aaKnown RBP21.07■□□□□ 0.96
ARHGEF28-212ENST00000513042 TSPYL4Q9UJ04 414 aa21.07■□□□□ 0.96
ARHGEF28-212ENST00000513042 INTS3Q68E01 1043 aaKnown RBP21.07■□□□□ 0.96
ARHGEF28-212ENST00000513042 RNF20Q5VTR2 975 aa21.06■□□□□ 0.96
ARHGEF28-212ENST00000513042 API5Q9BZZ5 524 aaKnown RBP21.06■□□□□ 0.96
ARHGEF28-212ENST00000513042 PANK1Q8TE04 598 aa21.06■□□□□ 0.96
ARHGEF28-212ENST00000513042 PSME1Q06323 249 aa21.06■□□□□ 0.96
ARHGEF28-212ENST00000513042 HOOK1Q9UJC3 728 aaKnown RBP21.05■□□□□ 0.96
ARHGEF28-212ENST00000513042 IFT57Q9NWB7 429 aa21.05■□□□□ 0.96
ARHGEF28-212ENST00000513042 MTMR7Q9Y216 660 aa21.05■□□□□ 0.96
ARHGEF28-212ENST00000513042 DDX58O95786 925 aaKnown RBP21.05■□□□□ 0.96
ARHGEF28-212ENST00000513042 NEUROD6Q96NK8 337 aa21.05■□□□□ 0.96
ARHGEF28-212ENST00000513042 JPH4Q96JJ6 628 aa21.04■□□□□ 0.96
ARHGEF28-212ENST00000513042 RUNDC1Q96C34 613 aa21.04■□□□□ 0.96
ARHGEF28-212ENST00000513042 ROCK1Q13464 1354 aa21.03■□□□□ 0.96
ARHGEF28-212ENST00000513042 NUTM2GQ5VZR2 741 aa21.03■□□□□ 0.96
ARHGEF28-212ENST00000513042 C22orf23Q9BZE7 217 aa21.02■□□□□ 0.96
ARHGEF28-212ENST00000513042 WASHC4Q2M389 1173 aa21.01■□□□□ 0.95
ARHGEF28-212ENST00000513042 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
ARHGEF28-212ENST00000513042 TEX35Q5T0J7 233 aa21.01■□□□□ 0.95
ARHGEF28-212ENST00000513042 RIC3Q7Z5B4 369 aa21■□□□□ 0.95
ARHGEF28-212ENST00000513042 MEX3CQ5U5Q3 659 aaKnown RBP21■□□□□ 0.95
ARHGEF28-212ENST00000513042 PDILTQ8N807 584 aa21■□□□□ 0.95
ARHGEF28-212ENST00000513042 CCDC43Q96MW1 224 aaKnown RBP21■□□□□ 0.95
ARHGEF28-212ENST00000513042 CCDC73Q6ZRK6 1079 aa20.99■□□□□ 0.95
ARHGEF28-212ENST00000513042 FANCIQ9NVI1 1328 aa20.99■□□□□ 0.95
ARHGEF28-212ENST00000513042 KLHL34Q8N239 644 aa20.98■□□□□ 0.95
ARHGEF28-212ENST00000513042 TTLL5Q6EMB2 1281 aa20.98■□□□□ 0.95
ARHGEF28-212ENST00000513042 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
ARHGEF28-212ENST00000513042 ERC2O15083 957 aa20.97■□□□□ 0.95
ARHGEF28-212ENST00000513042 CNKSR2Q8WXI2 1034 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms