RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 NUTM2EB1AL46 878 aaPredicted RBP16.12■□□□□ 0.17
NEDD9-213ENST00000512665 NUTM2DQ5VT03 806 aaPredicted RBP16.12■□□□□ 0.17
NEDD9-213ENST00000512665 NUTM2AQ8IVF1 878 aaPredicted RBP16.12■□□□□ 0.17
NEDD9-213ENST00000512665 SLC26A8Q96RN1 970 aa16.12■□□□□ 0.17
NEDD9-213ENST00000512665 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
NEDD9-213ENST00000512665 CHD2O14647 1828 aaKnown RBP16.11■□□□□ 0.17
NEDD9-213ENST00000512665 CADPS2Q86UW7 1296 aa16.1■□□□□ 0.17
NEDD9-213ENST00000512665 CCDC125Q86Z20 511 aa16.1■□□□□ 0.17
NEDD9-213ENST00000512665 NGLY1Q96IV0 654 aa16.1■□□□□ 0.17
NEDD9-213ENST00000512665 QTRT2Q9H974 415 aaKnown RBP16.1■□□□□ 0.17
NEDD9-213ENST00000512665 CFAP65Q6ZU64 1925 aaKnown RBP16.09■□□□□ 0.17
NEDD9-213ENST00000512665 TSPY4P0CV99 314 aa16.08■□□□□ 0.16
NEDD9-213ENST00000512665 TSPY10P0CW01 314 aa16.08■□□□□ 0.16
NEDD9-213ENST00000512665 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
NEDD9-213ENST00000512665 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.07■□□□□ 0.16
NEDD9-213ENST00000512665 ADGRB3O60242 1522 aa16.06■□□□□ 0.16
NEDD9-213ENST00000512665 STAG3Q9UJ98 1225 aa16.06■□□□□ 0.16
NEDD9-213ENST00000512665 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
NEDD9-213ENST00000512665 C19orf44Q9H6X5 657 aa16.05■□□□□ 0.16
NEDD9-213ENST00000512665 DCCP43146 1447 aa16.04■□□□□ 0.16
NEDD9-213ENST00000512665 NHSL1Q5SYE7 1610 aa16.04■□□□□ 0.16
NEDD9-213ENST00000512665 DUOX2Q9NRD8 1548 aa16.04■□□□□ 0.16
NEDD9-213ENST00000512665 PLEKHG1Q9ULL1 1385 aa16.03■□□□□ 0.16
NEDD9-213ENST00000512665 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
NEDD9-213ENST00000512665 ASXL1Q8IXJ9 1541 aa16.03■□□□□ 0.16
NEDD9-213ENST00000512665 ATF3P18847 181 aa16.02■□□□□ 0.16
NEDD9-213ENST00000512665 C8orf37Q96NL8 207 aa16.02■□□□□ 0.16
NEDD9-213ENST00000512665 IDI1Q13907 227 aa16.01■□□□□ 0.15
NEDD9-213ENST00000512665 ZFYVE9O95405 1425 aa16.01■□□□□ 0.15
NEDD9-213ENST00000512665 LMTK2Q8IWU2 1503 aa16■□□□□ 0.15
NEDD9-213ENST00000512665 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
NEDD9-213ENST00000512665 LRRC59Q96AG4 307 aaKnown RBP15.99■□□□□ 0.15
NEDD9-213ENST00000512665 PIK3R4Q99570 1358 aa15.99■□□□□ 0.15
NEDD9-213ENST00000512665 NOS1P29475 1434 aa15.98■□□□□ 0.15
NEDD9-213ENST00000512665 ERBINQ96RT1 1412 aa15.98■□□□□ 0.15
NEDD9-213ENST00000512665 TBX22Q9Y458 520 aa15.98■□□□□ 0.15
NEDD9-213ENST00000512665 C14orf37Q86TY3 774 aa15.97■□□□□ 0.15
NEDD9-213ENST00000512665 TRPC5Q9UL62 973 aaPredicted RBP15.96■□□□□ 0.15
NEDD9-213ENST00000512665 ATRNO75882 1429 aa15.95■□□□□ 0.14
NEDD9-213ENST00000512665 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
NEDD9-213ENST00000512665 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
NEDD9-213ENST00000512665 FNBP4Q8N3X1 1017 aaPredicted RBP15.93■□□□□ 0.14
NEDD9-213ENST00000512665 BCANQ96GW7 911 aa15.93■□□□□ 0.14
NEDD9-213ENST00000512665 MST1RQ04912 1400 aa15.93■□□□□ 0.14
NEDD9-213ENST00000512665 PTCH1Q13635 1447 aa15.92■□□□□ 0.14
NEDD9-213ENST00000512665 ADAMTS13Q76LX8 1427 aa15.92■□□□□ 0.14
NEDD9-213ENST00000512665 LAMC1P11047 1609 aa15.91■□□□□ 0.14
NEDD9-213ENST00000512665 KANK1Q14678 1352 aa15.91■□□□□ 0.14
NEDD9-213ENST00000512665 HDGFP51858 240 aaKnown RBP15.91■□□□□ 0.14
NEDD9-213ENST00000512665 USP21Q9UK80 565 aa15.91■□□□□ 0.14
NEDD9-213ENST00000512665 RIMS2Q9UQ26 1411 aa15.9■□□□□ 0.14
NEDD9-213ENST00000512665 KIF15Q9NS87 1388 aa15.89■□□□□ 0.13
NEDD9-213ENST00000512665 UNC13BO14795 1591 aa15.89■□□□□ 0.13
NEDD9-213ENST00000512665 TRPM2O94759 1503 aa15.88■□□□□ 0.13
NEDD9-213ENST00000512665 SPHKAPQ2M3C7 1700 aa15.88■□□□□ 0.13
NEDD9-213ENST00000512665 RPRD2Q5VT52 1461 aaKnown RBP15.87■□□□□ 0.13
NEDD9-213ENST00000512665 BCL9LQ86UU0 1499 aa15.87■□□□□ 0.13
NEDD9-213ENST00000512665 TMEM131LA2VDJ0 1609 aa15.86■□□□□ 0.13
NEDD9-213ENST00000512665 PPP1R15AO75807 674 aaPredicted RBP15.86■□□□□ 0.13
NEDD9-213ENST00000512665 ADAMTS2O95450 1211 aa15.86■□□□□ 0.13
NEDD9-213ENST00000512665 COL22A1Q8NFW1 1626 aaPredicted RBP15.85■□□□□ 0.13
NEDD9-213ENST00000512665 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
NEDD9-213ENST00000512665 MYO5BQ9ULV0 1848 aa15.84■□□□□ 0.13
NEDD9-213ENST00000512665 GCC2Q8IWJ2 1684 aa15.84■□□□□ 0.13
NEDD9-213ENST00000512665 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
NEDD9-213ENST00000512665 XRN1Q8IZH2 1706 aaKnown RBP15.84■□□□□ 0.13
NEDD9-213ENST00000512665 HRCP23327 699 aa15.82■□□□□ 0.12
NEDD9-213ENST00000512665 CROCC2H7BZ55 1655 aa15.82■□□□□ 0.12
NEDD9-213ENST00000512665 PTPRUQ92729 1446 aa15.81■□□□□ 0.12
NEDD9-213ENST00000512665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
NEDD9-213ENST00000512665 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.81■□□□□ 0.12
NEDD9-213ENST00000512665 ADGRL3Q9HAR2 1447 aa15.8■□□□□ 0.12
NEDD9-213ENST00000512665 SOS2Q07890 1332 aaPredicted RBP15.8■□□□□ 0.12
NEDD9-213ENST00000512665 AMOTL2Q9Y2J4 779 aa15.8■□□□□ 0.12
NEDD9-213ENST00000512665 MYOM2P54296 1465 aa15.79■□□□□ 0.12
NEDD9-213ENST00000512665 DEFB132Q7Z7B7 95 aa15.79■□□□□ 0.12
NEDD9-213ENST00000512665 GJD4Q96KN9 370 aaPredicted RBP15.79■□□□□ 0.12
NEDD9-213ENST00000512665 YY1P25490 414 aa15.78■□□□□ 0.12
NEDD9-213ENST00000512665 IFFO2Q5TF58 517 aa15.78■□□□□ 0.12
NEDD9-213ENST00000512665 PTPN23Q9H3S7 1636 aa15.77■□□□□ 0.12
NEDD9-213ENST00000512665 SF3B2Q13435 895 aaKnown RBP15.77■□□□□ 0.12
NEDD9-213ENST00000512665 DDX17Q92841 729 aaKnown RBP15.77■□□□□ 0.12
NEDD9-213ENST00000512665 MARF1Q9Y4F3 1742 aaKnown RBP15.77■□□□□ 0.11
NEDD9-213ENST00000512665 GLI3P10071 1580 aa15.75■□□□□ 0.11
NEDD9-213ENST00000512665 C1orf167Q5SNV9 1468 aa15.75■□□□□ 0.11
NEDD9-213ENST00000512665 RRP7BPQ9NSQ0 103 aa15.74■□□□□ 0.11
NEDD9-213ENST00000512665 ABCC5O15440 1437 aa15.74■□□□□ 0.11
NEDD9-213ENST00000512665 NALCNQ8IZF0 1738 aa15.74■□□□□ 0.11
NEDD9-213ENST00000512665 RALGAPBQ86X10 1494 aa15.73■□□□□ 0.11
NEDD9-213ENST00000512665 BRWD3Q6RI45 1802 aa15.72■□□□□ 0.11
NEDD9-213ENST00000512665 NRXN3Q9Y4C0 1643 aa15.72■□□□□ 0.11
NEDD9-213ENST00000512665 PSDA5PKW4 1024 aaPredicted RBP15.71■□□□□ 0.11
NEDD9-213ENST00000512665 SLIT2O94813 1529 aa15.69■□□□□ 0.1
NEDD9-213ENST00000512665 BAG6P46379 1132 aa15.68■□□□□ 0.1
NEDD9-213ENST00000512665 DAPK1P53355 1430 aa15.68■□□□□ 0.1
NEDD9-213ENST00000512665 ANKRD30AQ9BXX3 1397 aa15.67■□□□□ 0.1
NEDD9-213ENST00000512665 IQGAP3Q86VI3 1631 aa15.67■□□□□ 0.1
NEDD9-213ENST00000512665 UNC5CLQ8IV45 518 aa15.66■□□□□ 0.1
NEDD9-213ENST00000512665 ONECUT3O60422 494 aaPredicted RBP15.65■□□□□ 0.1
NEDD9-213ENST00000512665 DISP2A7MBM2 1401 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms