RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 ESF1Q9H501 851 aaKnown RBP11.56□□□□□ -0.56
USP46-208ENST00000512656 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
USP46-208ENST00000512656 FER1L4A9Z1Z3 1794 aa11.56□□□□□ -0.56
USP46-208ENST00000512656 PREX2Q70Z35 1606 aa11.56□□□□□ -0.56
USP46-208ENST00000512656 SIGLEC1Q9BZZ2 1709 aa11.55□□□□□ -0.56
USP46-208ENST00000512656 ABCC1P33527 1531 aa11.55□□□□□ -0.56
USP46-208ENST00000512656 CDC42BPBQ9Y5S2 1711 aa11.55□□□□□ -0.56
USP46-208ENST00000512656 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
USP46-208ENST00000512656 CDAN1Q8IWY9 1227 aa11.54□□□□□ -0.56
USP46-208ENST00000512656 ZNF777Q9ULD5 760 aaPredicted RBP11.54□□□□□ -0.56
USP46-208ENST00000512656 REREQ9P2R6 1566 aa11.54□□□□□ -0.56
USP46-208ENST00000512656 TRAPPC8Q9Y2L5 1435 aa11.53□□□□□ -0.56
USP46-208ENST00000512656 HOXB3P14651 431 aaPredicted RBP11.53□□□□□ -0.56
USP46-208ENST00000512656 DIP2CQ9Y2E4 1556 aa11.53□□□□□ -0.56
USP46-208ENST00000512656 CFDP1Q9UEE9 299 aaPredicted RBP11.52□□□□□ -0.57
USP46-208ENST00000512656 MTUS2Q5JR59 1369 aa11.52□□□□□ -0.57
USP46-208ENST00000512656 AGLP35573 1532 aa11.51□□□□□ -0.57
USP46-208ENST00000512656 CEBPAP49715 358 aaPredicted RBP11.51□□□□□ -0.57
USP46-208ENST00000512656 HS6ST3Q8IZP7 471 aa11.51□□□□□ -0.57
USP46-208ENST00000512656 SPAG9O60271 1321 aaKnown RBP11.51□□□□□ -0.57
USP46-208ENST00000512656 CCNB3Q8WWL7 1395 aa11.51□□□□□ -0.57
USP46-208ENST00000512656 PLEKHH2Q8IVE3 1493 aa11.51□□□□□ -0.57
USP46-208ENST00000512656 GPATCH8Q9UKJ3 1502 aaKnown RBP11.5□□□□□ -0.57
USP46-208ENST00000512656 ITSN2Q9NZM3 1697 aa11.5□□□□□ -0.57
USP46-208ENST00000512656 TMEM92Q6UXU6 159 aa11.5□□□□□ -0.57
USP46-208ENST00000512656 ABCA6Q8N139 1617 aa11.49□□□□□ -0.57
USP46-208ENST00000512656 CDC42BPAQ5VT25 1732 aa11.49□□□□□ -0.57
USP46-208ENST00000512656 RIMBP2O15034 1052 aa11.49□□□□□ -0.57
USP46-208ENST00000512656 HNRNPMP52272 730 aaKnown RBP eCLIP11.49□□□□□ -0.571e-7■■■□□ 14.8
USP46-208ENST00000512656 UHRF1BP1Q6BDS2 1440 aa11.49□□□□□ -0.57
USP46-208ENST00000512656 CNTLNQ9NXG0 1405 aa11.49□□□□□ -0.57
USP46-208ENST00000512656 KIAA1107Q9UPP5 1409 aa11.49□□□□□ -0.57
USP46-208ENST00000512656 PREX1Q8TCU6 1659 aa11.49□□□□□ -0.57
USP46-208ENST00000512656 EMP3P54852 163 aa11.48□□□□□ -0.57
USP46-208ENST00000512656 ZNF710Q8N1W2 664 aa11.48□□□□□ -0.57
USP46-208ENST00000512656 MARVELD3Q96A59 401 aa11.48□□□□□ -0.57
USP46-208ENST00000512656 ZSWIM6Q9HCJ5 1215 aa11.48□□□□□ -0.57
USP46-208ENST00000512656 SETD1BQ9UPS6 1966 aaKnown RBP11.48□□□□□ -0.57
USP46-208ENST00000512656 SAMD9LQ8IVG5 1584 aa11.47□□□□□ -0.57
USP46-208ENST00000512656 SYCP2Q9BX26 1530 aa11.47□□□□□ -0.57
USP46-208ENST00000512656 KIDINS220Q9ULH0 1771 aa11.46□□□□□ -0.57
USP46-208ENST00000512656 HOXB1P14653 301 aaPredicted RBP11.46□□□□□ -0.57
USP46-208ENST00000512656 CERKQ8TCT0 537 aa11.45□□□□□ -0.58
USP46-208ENST00000512656 CEP162Q5TB80 1403 aa11.44□□□□□ -0.58
USP46-208ENST00000512656 ATP7AQ04656 1500 aa11.43□□□□□ -0.58
USP46-208ENST00000512656 EHBP1L1Q8N3D4 1523 aa11.43□□□□□ -0.58
USP46-208ENST00000512656 A2MP01023 1474 aa11.42□□□□□ -0.58
USP46-208ENST00000512656 C3P01024 1663 aa11.42□□□□□ -0.58
USP46-208ENST00000512656 NPATQ14207 1427 aa11.42□□□□□ -0.58
USP46-208ENST00000512656 ZMYM3Q14202 1370 aa11.41□□□□□ -0.58
USP46-208ENST00000512656 KIF3CO14782 793 aa11.4□□□□□ -0.58
USP46-208ENST00000512656 PTPRTO14522 1441 aa11.4□□□□□ -0.58
USP46-208ENST00000512656 INO80Q9ULG1 1556 aaPredicted RBP11.4□□□□□ -0.58
USP46-208ENST00000512656 ZNF644Q9H582 1327 aaPredicted RBP11.39□□□□□ -0.59
USP46-208ENST00000512656 RTEL1-TNFRSF6BF6WH68 1400 aa11.39□□□□□ -0.59
USP46-208ENST00000512656 TIAM1Q13009 1591 aa11.39□□□□□ -0.59
USP46-208ENST00000512656 RSPH4AQ5TD94 716 aa11.39□□□□□ -0.59
USP46-208ENST00000512656 GGT6Q6P531 493 aa11.39□□□□□ -0.59
USP46-208ENST00000512656 HS3ST6Q96QI5 342 aa11.39□□□□□ -0.59
USP46-208ENST00000512656 MROH2AA6NES4 1674 aa11.39□□□□□ -0.59
USP46-208ENST00000512656 PLXNC1O60486 1568 aa11.38□□□□□ -0.59
USP46-208ENST00000512656 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
USP46-208ENST00000512656 MBD5Q9P267 1494 aa11.38□□□□□ -0.59
USP46-208ENST00000512656 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
USP46-208ENST00000512656 FAM205CA6NFA0 338 aa11.37□□□□□ -0.59
USP46-208ENST00000512656 RYDENQ9NUL5 291 aaKnown RBP11.37□□□□□ -0.59
USP46-208ENST00000512656 STRCQ7RTU9 1775 aa11.36□□□□□ -0.59
USP46-208ENST00000512656 DHX29Q7Z478 1369 aaKnown RBP11.36□□□□□ -0.59
USP46-208ENST00000512656 NCOA2Q15596 1464 aa11.36□□□□□ -0.59
USP46-208ENST00000512656 ADGBQ8N7X0 1667 aa11.36□□□□□ -0.59
USP46-208ENST00000512656 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
USP46-208ENST00000512656 TSPY4P0CV99 314 aa11.35□□□□□ -0.59
USP46-208ENST00000512656 TSPY10P0CW01 314 aa11.35□□□□□ -0.59
USP46-208ENST00000512656 GPR153Q6NV75 609 aa11.35□□□□□ -0.59
USP46-208ENST00000512656 CCDC141Q6ZP82 1450 aa11.35□□□□□ -0.59
USP46-208ENST00000512656 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
USP46-208ENST00000512656 C2orf72A6NCS6 295 aa11.34□□□□□ -0.59
USP46-208ENST00000512656 PPP1R37O75864 691 aa11.34□□□□□ -0.59
USP46-208ENST00000512656 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
USP46-208ENST00000512656 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
USP46-208ENST00000512656 VPS8Q8N3P4 1428 aa11.34□□□□□ -0.59
USP46-208ENST00000512656 CAMSAP2Q08AD1 1489 aa11.33□□□□□ -0.6
USP46-208ENST00000512656 KIF3BO15066 747 aa11.33□□□□□ -0.6
USP46-208ENST00000512656 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
USP46-208ENST00000512656 CLTCQ00610 1675 aaKnown RBP11.33□□□□□ -0.6
USP46-208ENST00000512656 CAMSAP1Q5T5Y3 1602 aa11.32□□□□□ -0.6
USP46-208ENST00000512656 ERBB3P21860 1342 aa11.32□□□□□ -0.6
USP46-208ENST00000512656 LOC105371045A0A1W2PR82 267 aa11.31□□□□□ -0.6
USP46-208ENST00000512656 SLC34A2O95436 690 aa11.31□□□□□ -0.6
USP46-208ENST00000512656 PLA2R1Q13018 1463 aa11.31□□□□□ -0.6
USP46-208ENST00000512656 LRRC9Q6ZRR7 1453 aa11.31□□□□□ -0.6
USP46-208ENST00000512656 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
USP46-208ENST00000512656 NCKAP5LQ9HCH0 1330 aa11.3□□□□□ -0.6
USP46-208ENST00000512656 WASHC2CQ9Y4E1 1318 aa11.3□□□□□ -0.6
USP46-208ENST00000512656 ARHGEF5Q12774 1597 aa11.29□□□□□ -0.6
USP46-208ENST00000512656 CEP170BQ9Y4F5 1589 aaPredicted RBP11.29□□□□□ -0.6
USP46-208ENST00000512656 IQSEC2Q5JU85 1478 aa11.29□□□□□ -0.6
USP46-208ENST00000512656 MAP3K1Q13233 1512 aa11.29□□□□□ -0.6
USP46-208ENST00000512656 MYO3AQ8NEV4 1616 aa11.28□□□□□ -0.6
USP46-208ENST00000512656 ZNF142P52746 1687 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms