RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 CFAP65Q6ZU64 1925 aaKnown RBP33.92■■■■□ 3.02
SPOCK3-221ENST00000512648 ZFYVE9O95405 1425 aa33.92■■■■□ 3.02
SPOCK3-221ENST00000512648 ADGRF5Q8IZF2 1346 aa33.92■■■■□ 3.02
SPOCK3-221ENST00000512648 CHGAP10645 457 aaKnown RBP33.92■■■■□ 3.02
SPOCK3-221ENST00000512648 FBXO31Q5XUX0 539 aaPredicted RBP33.92■■■■□ 3.02
SPOCK3-221ENST00000512648 ESF1Q9H501 851 aaKnown RBP33.92■■■■□ 3.02
SPOCK3-221ENST00000512648 ZMYM3Q14202 1370 aa33.91■■■■□ 3.02
SPOCK3-221ENST00000512648 MLECQ14165 292 aa33.91■■■■□ 3.02
SPOCK3-221ENST00000512648 PPLO60437 1756 aa33.88■■■■□ 3.01
SPOCK3-221ENST00000512648 VGFO15240 615 aaPredicted RBP33.88■■■■□ 3.01
SPOCK3-221ENST00000512648 SCAF11Q99590 1463 aaKnown RBP33.86■■■■□ 3.01
SPOCK3-221ENST00000512648 PIK3C2GO75747 1445 aa33.85■■■■□ 3.01
SPOCK3-221ENST00000512648 TMEM131LA2VDJ0 1609 aa33.85■■■■□ 3.01
SPOCK3-221ENST00000512648 NEXMIFQ5QGS0 1516 aa33.84■■■■□ 3.01
SPOCK3-221ENST00000512648 C14orf93Q9H972 538 aaKnown RBP33.83■■■■□ 3.01
SPOCK3-221ENST00000512648 TESK2Q96S53 571 aa33.82■■■■□ 3
SPOCK3-221ENST00000512648 SETBP1Q9Y6X0 1596 aa33.81■■■■□ 3
SPOCK3-221ENST00000512648 ANP32CO43423 234 aa33.81■■■■□ 3
SPOCK3-221ENST00000512648 CFAP70Q5T0N1 1121 aa33.81■■■■□ 3
SPOCK3-221ENST00000512648 IQGAP1P46940 1657 aa33.8■■■■□ 3
SPOCK3-221ENST00000512648 SLC24A1O60721 1099 aa33.78■■■■□ 3
SPOCK3-221ENST00000512648 EIF3AQ14152 1382 aaKnown RBP33.75■■■□□ 2.99
SPOCK3-221ENST00000512648 CCER2I3L3R5 266 aa33.75■■■□□ 2.99
SPOCK3-221ENST00000512648 A2ML1A8K2U0 1454 aa33.71■■■□□ 2.99
SPOCK3-221ENST00000512648 TMF1P82094 1093 aa33.69■■■□□ 2.98
SPOCK3-221ENST00000512648 TNRQ92752 1358 aa33.69■■■□□ 2.98
SPOCK3-221ENST00000512648 ADGRB1O14514 1584 aa33.67■■■□□ 2.98
SPOCK3-221ENST00000512648 STAG3Q9UJ98 1225 aa33.66■■■□□ 2.98
SPOCK3-221ENST00000512648 KDM5AP29375 1690 aaKnown RBP33.64■■■□□ 2.98
SPOCK3-221ENST00000512648 SBNO2Q9Y2G9 1366 aa33.62■■■□□ 2.97
SPOCK3-221ENST00000512648 CDCA8Q53HL2 280 aa33.62■■■□□ 2.97
SPOCK3-221ENST00000512648 MYO5BQ9ULV0 1848 aa33.6■■■□□ 2.97
SPOCK3-221ENST00000512648 DISP3Q9P2K9 1392 aa33.59■■■□□ 2.97
SPOCK3-221ENST00000512648 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.59■■■□□ 2.97
SPOCK3-221ENST00000512648 NLRP1Q9C000 1473 aa33.59■■■□□ 2.97
SPOCK3-221ENST00000512648 HDGFP51858 240 aaKnown RBP33.57■■■□□ 2.97
SPOCK3-221ENST00000512648 MYO3AQ8NEV4 1616 aa33.57■■■□□ 2.96
SPOCK3-221ENST00000512648 RIMS2Q9UQ26 1411 aa33.57■■■□□ 2.96
SPOCK3-221ENST00000512648 PRKRIP1Q9H875 184 aaPredicted RBP33.54■■■□□ 2.96
SPOCK3-221ENST00000512648 NUTM2DQ5VT03 806 aaPredicted RBP33.52■■■□□ 2.96
SPOCK3-221ENST00000512648 POLR3GLQ9BT43 218 aa33.52■■■□□ 2.96
SPOCK3-221ENST00000512648 FER1L4A9Z1Z3 1794 aa33.5■■■□□ 2.95
SPOCK3-221ENST00000512648 CENPJQ9HC77 1338 aaPredicted RBP33.5■■■□□ 2.95
SPOCK3-221ENST00000512648 TMEM132EQ6IEE7 984 aa33.48■■■□□ 2.95
SPOCK3-221ENST00000512648 C3P01024 1663 aa33.48■■■□□ 2.95
SPOCK3-221ENST00000512648 CENPBP07199 599 aaPredicted RBP33.47■■■□□ 2.95
SPOCK3-221ENST00000512648 TMEM2Q9UHN6 1383 aa33.45■■■□□ 2.95
SPOCK3-221ENST00000512648 TRAK1Q9UPV9 953 aa33.44■■■□□ 2.94
SPOCK3-221ENST00000512648 ALKQ9UM73 1620 aa33.44■■■□□ 2.94
SPOCK3-221ENST00000512648 KTN1Q86UP2 1357 aaKnown RBP33.44■■■□□ 2.94
SPOCK3-221ENST00000512648 CEBPAP49715 358 aaPredicted RBP33.44■■■□□ 2.94
SPOCK3-221ENST00000512648 PUS7Q96PZ0 661 aaKnown RBP33.44■■■□□ 2.94
SPOCK3-221ENST00000512648 UBR1Q8IWV7 1749 aa33.43■■■□□ 2.94
SPOCK3-221ENST00000512648 PER1O15534 1290 aaPredicted RBP33.42■■■□□ 2.94
SPOCK3-221ENST00000512648 ASXL1Q8IXJ9 1541 aa33.42■■■□□ 2.94
SPOCK3-221ENST00000512648 YTHDC2Q9H6S0 1430 aaKnown RBP33.37■■■□□ 2.93
SPOCK3-221ENST00000512648 ADAMTSL3P82987 1691 aa33.35■■■□□ 2.93
SPOCK3-221ENST00000512648 YTHDC1Q96MU7 727 aaKnown RBP33.33■■■□□ 2.93
SPOCK3-221ENST00000512648 ARHGAP23Q9P227 1491 aa33.33■■■□□ 2.93
SPOCK3-221ENST00000512648 RALBP1Q15311 655 aa33.32■■■□□ 2.92
SPOCK3-221ENST00000512648 PANK3Q9H999 370 aa33.32■■■□□ 2.92
SPOCK3-221ENST00000512648 ARHGEF28Q8N1W1 1705 aaKnown RBP33.32■■■□□ 2.92
SPOCK3-221ENST00000512648 SLIT1O75093 1534 aa33.32■■■□□ 2.92
SPOCK3-221ENST00000512648 LRPPRCP42704 1394 aaKnown RBP33.31■■■□□ 2.92
SPOCK3-221ENST00000512648 PTPRMP28827 1452 aa33.31■■■□□ 2.92
SPOCK3-221ENST00000512648 DLC1Q96QB1 1528 aa33.3■■■□□ 2.92
SPOCK3-221ENST00000512648 THEMISQ8N1K5 641 aaPredicted RBP33.3■■■□□ 2.92
SPOCK3-221ENST00000512648 ABCC11Q96J66 1382 aa33.3■■■□□ 2.92
SPOCK3-221ENST00000512648 QRICH2Q9H0J4 1663 aa33.29■■■□□ 2.92
SPOCK3-221ENST00000512648 SETD1AO15047 1707 aaKnown RBP33.28■■■□□ 2.92
SPOCK3-221ENST00000512648 NRXN3Q9Y4C0 1643 aa33.28■■■□□ 2.92
SPOCK3-221ENST00000512648 PLEKHG1Q9ULL1 1385 aa33.28■■■□□ 2.92
SPOCK3-221ENST00000512648 SIRT1Q96EB6 747 aa33.28■■■□□ 2.92
SPOCK3-221ENST00000512648 EVC2Q86UK5 1308 aa33.25■■■□□ 2.91
SPOCK3-221ENST00000512648 EID1Q9Y6B2 187 aa33.24■■■□□ 2.91
SPOCK3-221ENST00000512648 RIMS1Q86UR5 1692 aaKnown RBP33.23■■■□□ 2.91
SPOCK3-221ENST00000512648 STK26Q9P289 416 aa33.22■■■□□ 2.91
SPOCK3-221ENST00000512648 PARD3Q8TEW0 1356 aa33.22■■■□□ 2.91
SPOCK3-221ENST00000512648 NPC1L1Q9UHC9 1359 aa33.22■■■□□ 2.91
SPOCK3-221ENST00000512648 LTKP29376 864 aa33.21■■■□□ 2.91
SPOCK3-221ENST00000512648 TXNDC2Q86VQ3 553 aa33.2■■■□□ 2.91
SPOCK3-221ENST00000512648 MYOM1P52179 1685 aa33.2■■■□□ 2.9
SPOCK3-221ENST00000512648 TECPR2O15040 1411 aa33.19■■■□□ 2.9
SPOCK3-221ENST00000512648 MED14O60244 1454 aa33.18■■■□□ 2.9
SPOCK3-221ENST00000512648 ADAMTS13Q76LX8 1427 aa33.18■■■□□ 2.9
SPOCK3-221ENST00000512648 PRAM1Q96QH2 718 aa33.18■■■□□ 2.9
SPOCK3-221ENST00000512648 METP08581 1390 aa33.17■■■□□ 2.9
SPOCK3-221ENST00000512648 MYBBP1AQ9BQG0 1328 aaKnown RBP33.16■■■□□ 2.9
SPOCK3-221ENST00000512648 POGKQ9P215 609 aa33.16■■■□□ 2.9
SPOCK3-221ENST00000512648 KNSTRNQ9Y448 316 aa33.16■■■□□ 2.9
SPOCK3-221ENST00000512648 TULP4Q9NRJ4 1543 aa33.15■■■□□ 2.9
SPOCK3-221ENST00000512648 FAM135BQ49AJ0 1406 aa33.15■■■□□ 2.9
SPOCK3-221ENST00000512648 MRS2Q9HD23 443 aa33.14■■■□□ 2.9
SPOCK3-221ENST00000512648 CEP170BQ9Y4F5 1589 aaPredicted RBP33.13■■■□□ 2.89
SPOCK3-221ENST00000512648 CCDC184Q52MB2 194 aa33.13■■■□□ 2.89
SPOCK3-221ENST00000512648 NINLQ9Y2I6 1382 aa33.13■■■□□ 2.89
SPOCK3-221ENST00000512648 TBX22Q9Y458 520 aa33.12■■■□□ 2.89
SPOCK3-221ENST00000512648 BRD4O60885 1362 aaPredicted RBP33.12■■■□□ 2.89
SPOCK3-221ENST00000512648 AMER1Q5JTC6 1135 aaPredicted RBP33.12■■■□□ 2.89
SPOCK3-221ENST00000512648 KNDC1Q76NI1 1749 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms