RNA–Protein interactions for RNA: ENST00000512304.2

PROM1-213, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-213ENST00000512304 LRRC9Q6ZRR7 1453 aa14.68□□□□□ -0.06
PROM1-213ENST00000512304 ARHGAP31Q2M1Z3 1444 aa14.67□□□□□ -0.06
PROM1-213ENST00000512304 KANK4Q5T7N3 995 aaPredicted RBP14.67□□□□□ -0.06
PROM1-213ENST00000512304 AFF2P51816 1311 aa14.66□□□□□ -0.06
PROM1-213ENST00000512304 SPATA31A6Q5VVP1 1343 aa14.66□□□□□ -0.06
PROM1-213ENST00000512304 EFCAB6Q5THR3 1501 aa14.66□□□□□ -0.06
PROM1-213ENST00000512304 CFAP65Q6ZU64 1925 aaKnown RBP14.66□□□□□ -0.06
PROM1-213ENST00000512304 KIF15Q9NS87 1388 aa14.65□□□□□ -0.06
PROM1-213ENST00000512304 NUTM2DQ5VT03 806 aaPredicted RBP14.65□□□□□ -0.06
PROM1-213ENST00000512304 NWD1Q149M9 1564 aa14.64□□□□□ -0.07
PROM1-213ENST00000512304 MAST1Q9Y2H9 1570 aa14.64□□□□□ -0.07
PROM1-213ENST00000512304 NKTRP30414 1462 aaKnown RBP14.64□□□□□ -0.07
PROM1-213ENST00000512304 DDX17Q92841 729 aaKnown RBP14.64□□□□□ -0.07
PROM1-213ENST00000512304 RGS12O14924 1447 aa14.64□□□□□ -0.07
PROM1-213ENST00000512304 C14orf37Q86TY3 774 aa14.63□□□□□ -0.07
PROM1-213ENST00000512304 EIF2AK4Q9P2K8 1649 aaKnown RBP14.63□□□□□ -0.07
PROM1-213ENST00000512304 BRINP3Q76B58 766 aa14.62□□□□□ -0.07
PROM1-213ENST00000512304 DUOX2Q9NRD8 1548 aa14.61□□□□□ -0.07
PROM1-213ENST00000512304 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
PROM1-213ENST00000512304 FGD6Q6ZV73 1430 aa14.6□□□□□ -0.07
PROM1-213ENST00000512304 C8orf37Q96NL8 207 aa14.6□□□□□ -0.07
PROM1-213ENST00000512304 CHIC2Q9UKJ5 165 aa14.6□□□□□ -0.07
PROM1-213ENST00000512304 ABCC5O15440 1437 aa14.59□□□□□ -0.07
PROM1-213ENST00000512304 QTRT2Q9H974 415 aaKnown RBP14.59□□□□□ -0.07
PROM1-213ENST00000512304 ZFYVE9O95405 1425 aa14.58□□□□□ -0.07
PROM1-213ENST00000512304 NOS1P29475 1434 aa14.58□□□□□ -0.07
PROM1-213ENST00000512304 DIP2AQ14689 1571 aa14.58□□□□□ -0.08
PROM1-213ENST00000512304 ADGRB3O60242 1522 aa14.57□□□□□ -0.08
PROM1-213ENST00000512304 KDM5AP29375 1690 aaKnown RBP14.57□□□□□ -0.08
PROM1-213ENST00000512304 PLEKHG1Q9ULL1 1385 aa14.57□□□□□ -0.08
PROM1-213ENST00000512304 CDK12Q9NYV4 1490 aaPredicted RBP14.57□□□□□ -0.08
PROM1-213ENST00000512304 SETBP1Q9Y6X0 1596 aa14.56□□□□□ -0.08
PROM1-213ENST00000512304 AHDC1Q5TGY3 1603 aaPredicted RBP14.56□□□□□ -0.08
PROM1-213ENST00000512304 PPP1R15AO75807 674 aaPredicted RBP14.56□□□□□ -0.08
PROM1-213ENST00000512304 ATF3P18847 181 aa14.56□□□□□ -0.08
PROM1-213ENST00000512304 RIMS2Q9UQ26 1411 aa14.56□□□□□ -0.08
PROM1-213ENST00000512304 C19orf44Q9H6X5 657 aa14.55□□□□□ -0.08
PROM1-213ENST00000512304 ADAMTS13Q76LX8 1427 aa14.55□□□□□ -0.08
PROM1-213ENST00000512304 ERBINQ96RT1 1412 aa14.55□□□□□ -0.08
PROM1-213ENST00000512304 ADAMTS2O95450 1211 aa14.54□□□□□ -0.08
PROM1-213ENST00000512304 CADPS2Q86UW7 1296 aa14.54□□□□□ -0.08
PROM1-213ENST00000512304 TBX22Q9Y458 520 aa14.54□□□□□ -0.08
PROM1-213ENST00000512304 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
PROM1-213ENST00000512304 PTPRUQ92729 1446 aa14.54□□□□□ -0.08
PROM1-213ENST00000512304 KANK1Q14678 1352 aa14.53□□□□□ -0.08
PROM1-213ENST00000512304 RBM6P78332 1123 aaKnown RBP14.53□□□□□ -0.08
PROM1-213ENST00000512304 SHPRHQ149N8 1683 aa14.52□□□□□ -0.08
PROM1-213ENST00000512304 CHGAP10645 457 aaKnown RBP14.52□□□□□ -0.09
PROM1-213ENST00000512304 LMTK2Q8IWU2 1503 aa14.51□□□□□ -0.09
PROM1-213ENST00000512304 AMOTL2Q9Y2J4 779 aa14.51□□□□□ -0.09
PROM1-213ENST00000512304 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.5□□□□□ -0.09
PROM1-213ENST00000512304 SLC52A1Q9NWF4 448 aa14.5□□□□□ -0.09
PROM1-213ENST00000512304 PNPLA6Q8IY17 1366 aa14.49□□□□□ -0.09
PROM1-213ENST00000512304 ASXL1Q8IXJ9 1541 aa14.49□□□□□ -0.09
PROM1-213ENST00000512304 DAPK1P53355 1430 aa14.49□□□□□ -0.09
PROM1-213ENST00000512304 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
PROM1-213ENST00000512304 NGLY1Q96IV0 654 aa14.48□□□□□ -0.09
PROM1-213ENST00000512304 ZRANB1Q9UGI0 708 aa14.48□□□□□ -0.09
PROM1-213ENST00000512304 NCOA3Q9Y6Q9 1424 aa14.48□□□□□ -0.09
PROM1-213ENST00000512304 CHD2O14647 1828 aaKnown RBP14.47□□□□□ -0.09
PROM1-213ENST00000512304 MST1RQ04912 1400 aa14.47□□□□□ -0.09
PROM1-213ENST00000512304 ATAD2Q6PL18 1390 aa14.46□□□□□ -0.1
PROM1-213ENST00000512304 EP400Q96L91 3159 aa14.44□□□□□ -0.1
PROM1-213ENST00000512304 LRRC59Q96AG4 307 aaKnown RBP14.44□□□□□ -0.1
PROM1-213ENST00000512304 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
PROM1-213ENST00000512304 USP21Q9UK80 565 aa14.44□□□□□ -0.1
PROM1-213ENST00000512304 LOC105371045A0A1W2PR82 267 aa14.43□□□□□ -0.1
PROM1-213ENST00000512304 TMEM131LA2VDJ0 1609 aa14.43□□□□□ -0.1
PROM1-213ENST00000512304 VPS8Q8N3P4 1428 aa14.42□□□□□ -0.1
PROM1-213ENST00000512304 ANKRD30AQ9BXX3 1397 aa14.42□□□□□ -0.1
PROM1-213ENST00000512304 METP08581 1390 aa14.41□□□□□ -0.1
PROM1-213ENST00000512304 CROCC2H7BZ55 1655 aa14.4□□□□□ -0.1
PROM1-213ENST00000512304 DEFB132Q7Z7B7 95 aa14.4□□□□□ -0.1
PROM1-213ENST00000512304 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.4□□□□□ -0.1
PROM1-213ENST00000512304 ORAI2Q96SN7 254 aa14.4□□□□□ -0.1
PROM1-213ENST00000512304 PTPN23Q9H3S7 1636 aa14.4□□□□□ -0.1
PROM1-213ENST00000512304 GCC2Q8IWJ2 1684 aa14.39□□□□□ -0.11
PROM1-213ENST00000512304 MYO5BQ9ULV0 1848 aa14.39□□□□□ -0.11
PROM1-213ENST00000512304 HDGFP51858 240 aaKnown RBP14.39□□□□□ -0.11
PROM1-213ENST00000512304 TRPM2O94759 1503 aa14.38□□□□□ -0.11
PROM1-213ENST00000512304 ATRNO75882 1429 aa14.38□□□□□ -0.11
PROM1-213ENST00000512304 PIK3R4Q99570 1358 aa14.37□□□□□ -0.11
PROM1-213ENST00000512304 FNBP4Q8N3X1 1017 aaPredicted RBP14.37□□□□□ -0.11
PROM1-213ENST00000512304 TRPC5Q9UL62 973 aaPredicted RBP14.37□□□□□ -0.11
PROM1-213ENST00000512304 NHSL1Q5SYE7 1610 aa14.37□□□□□ -0.11
PROM1-213ENST00000512304 DCCP43146 1447 aa14.36□□□□□ -0.11
PROM1-213ENST00000512304 RPRD2Q5VT52 1461 aaKnown RBP14.35□□□□□ -0.11
PROM1-213ENST00000512304 C1orf167Q5SNV9 1468 aa14.34□□□□□ -0.11
PROM1-213ENST00000512304 BCL9LQ86UU0 1499 aa14.34□□□□□ -0.11
PROM1-213ENST00000512304 UNC13BO14795 1591 aa14.34□□□□□ -0.11
PROM1-213ENST00000512304 ANKRD50Q9ULJ7 1429 aa14.33□□□□□ -0.11
PROM1-213ENST00000512304 PSDA5PKW4 1024 aaPredicted RBP14.33□□□□□ -0.12
PROM1-213ENST00000512304 XPCQ01831 940 aaPredicted RBP14.33□□□□□ -0.12
PROM1-213ENST00000512304 SOS2Q07890 1332 aaPredicted RBP14.33□□□□□ -0.12
PROM1-213ENST00000512304 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
PROM1-213ENST00000512304 NRXN3Q9Y4C0 1643 aa14.32□□□□□ -0.12
PROM1-213ENST00000512304 XRN1Q8IZH2 1706 aaKnown RBP14.32□□□□□ -0.12
PROM1-213ENST00000512304 FAM50AQ14320 339 aaKnown RBP14.31□□□□□ -0.12
PROM1-213ENST00000512304 GJD4Q96KN9 370 aaPredicted RBP14.3□□□□□ -0.12
PROM1-213ENST00000512304 ADGRL2O95490 1459 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms