RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 GPBP1L1Q9HC44 474 aaPredicted RBP5.81□□□□□ -1.48
GYPA-208ENST00000512064 GOPCQ9HD26 462 aa5.81□□□□□ -1.48
GYPA-208ENST00000512064 PPP1R3GB7ZBB8 358 aa5.8□□□□□ -1.48
GYPA-208ENST00000512064 NRG2O14511 850 aaPredicted RBP5.8□□□□□ -1.48
GYPA-208ENST00000512064 IRF6O14896 467 aa5.8□□□□□ -1.48
GYPA-208ENST00000512064 MAP3K7O43318 606 aa5.8□□□□□ -1.48
GYPA-208ENST00000512064 FCHSD2O94868 740 aa5.8□□□□□ -1.48
GYPA-208ENST00000512064 EN1Q05925 392 aaPredicted RBP5.8□□□□□ -1.48
GYPA-208ENST00000512064 NYAP1Q6ZVC0 841 aa5.8□□□□□ -1.48
GYPA-208ENST00000512064 CCER1Q8TC90 406 aaPredicted RBP5.8□□□□□ -1.48
GYPA-208ENST00000512064 ZNF775Q96BV0 537 aaPredicted RBP5.8□□□□□ -1.48
GYPA-208ENST00000512064 TSR1Q2NL82 804 aaKnown RBP5.79□□□□□ -1.48
GYPA-208ENST00000512064 PROX2Q3B8N5 592 aa5.79□□□□□ -1.48
GYPA-208ENST00000512064 KCNC4Q03721 635 aa5.78□□□□□ -1.48
GYPA-208ENST00000512064 PDE4CQ08493 712 aa5.78□□□□□ -1.48
GYPA-208ENST00000512064 CCDC102AQ96A19 550 aa5.78□□□□□ -1.48
GYPA-208ENST00000512064 NUTM2FA1L443 756 aa5.77□□□□□ -1.49
GYPA-208ENST00000512064 PRIM1P49642 420 aaKnown RBP5.77□□□□□ -1.49
GYPA-208ENST00000512064 ARID3AQ99856 593 aa5.77□□□□□ -1.49
GYPA-208ENST00000512064 PTGDRQ13258 359 aa5.76□□□□□ -1.49
GYPA-208ENST00000512064 IL27Q8NEV9 243 aa5.76□□□□□ -1.49
GYPA-208ENST00000512064 PARP9Q8IXQ6 854 aa5.75□□□□□ -1.49
GYPA-208ENST00000512064 ANKK1Q8NFD2 765 aa5.75□□□□□ -1.49
GYPA-208ENST00000512064 CDHR5Q9HBB8 845 aa5.75□□□□□ -1.49
GYPA-208ENST00000512064 KIAA1468Q9P260 1216 aa5.75□□□□□ -1.49
GYPA-208ENST00000512064 RABGEF1Q9UJ41 708 aa5.75□□□□□ -1.49
GYPA-208ENST00000512064 PLEKHG3A1L390 1219 aa5.74□□□□□ -1.49
GYPA-208ENST00000512064 TRIM6-TRIM34B2RNG4 842 aa5.74□□□□□ -1.49
GYPA-208ENST00000512064 HSP90B1P14625 803 aaKnown RBP5.74□□□□□ -1.49
GYPA-208ENST00000512064 CDK11BP21127 795 aaKnown RBP5.74□□□□□ -1.49
GYPA-208ENST00000512064 BRD2P25440 801 aaKnown RBP5.74□□□□□ -1.49
GYPA-208ENST00000512064 FAM117AQ9C073 453 aa5.74□□□□□ -1.49
GYPA-208ENST00000512064 FLIIQ13045 1269 aa5.73□□□□□ -1.49
GYPA-208ENST00000512064 ONECUT3O60422 494 aaPredicted RBP5.72□□□□□ -1.49
GYPA-208ENST00000512064 CDCA7LQ96GN5 454 aa5.72□□□□□ -1.49
GYPA-208ENST00000512064 ZMYND15Q9H091 742 aa5.72□□□□□ -1.49
GYPA-208ENST00000512064 RSPH6AQ9H0K4 717 aa5.72□□□□□ -1.49
GYPA-208ENST00000512064 BCCIPQ9P287 314 aaKnown RBP eCLIP5.72□□□□□ -1.49
GYPA-208ENST00000512064 SEPT9Q9UHD8 586 aaPredicted RBP5.72□□□□□ -1.49
GYPA-208ENST00000512064 TSKSQ9UJT2 592 aa5.72□□□□□ -1.49
GYPA-208ENST00000512064 PRSS12P56730 875 aa5.71□□□□□ -1.5
GYPA-208ENST00000512064 PACS2Q86VP3 889 aa5.71□□□□□ -1.5
GYPA-208ENST00000512064 CERKQ8TCT0 537 aa5.71□□□□□ -1.5
GYPA-208ENST00000512064 NCLP19338 710 aaKnown RBP5.7□□□□□ -1.5
GYPA-208ENST00000512064 TMUB1Q9BVT8 246 aa5.7□□□□□ -1.5
GYPA-208ENST00000512064 SMAPO00193 183 aa5.69□□□□□ -1.5
GYPA-208ENST00000512064 FECHP22830 423 aa5.69□□□□□ -1.5
GYPA-208ENST00000512064 CLCN1P35523 988 aa5.69□□□□□ -1.5
GYPA-208ENST00000512064 TTLL12Q14166 644 aaPredicted RBP5.69□□□□□ -1.5
GYPA-208ENST00000512064 GIGYF2Q6Y7W6 1299 aaKnown RBP5.69□□□□□ -1.5
GYPA-208ENST00000512064 LAPTM4BQ86VI4 370 aa5.69□□□□□ -1.5
GYPA-208ENST00000512064 ZFRQ96KR1 1074 aaKnown RBP5.69□□□□□ -1.5
GYPA-208ENST00000512064 NPDC1Q9NQX5 325 aaPredicted RBP5.69□□□□□ -1.5
GYPA-208ENST00000512064 RBM27Q9P2N5 1060 aaKnown RBP5.69□□□□□ -1.5
GYPA-208ENST00000512064 PNMA3Q9UL41 463 aa5.69□□□□□ -1.5
GYPA-208ENST00000512064 V9GY48 417 aaPredicted RBP5.69□□□□□ -1.5
GYPA-208ENST00000512064 SOWAHBA6NEL2 793 aa5.68□□□□□ -1.5
GYPA-208ENST00000512064 FGD1P98174 961 aa5.68□□□□□ -1.5
GYPA-208ENST00000512064 SH3D19Q5HYK7 790 aa5.68□□□□□ -1.5
GYPA-208ENST00000512064 PADI6Q6TGC4 694 aa5.68□□□□□ -1.5
GYPA-208ENST00000512064 PRKD2Q9BZL6 878 aa5.68□□□□□ -1.5
GYPA-208ENST00000512064 FAM198AQ9UFP1 575 aa5.68□□□□□ -1.5
GYPA-208ENST00000512064 NBPF26B4DH59 902 aa5.67□□□□□ -1.5
GYPA-208ENST00000512064 C3orf80F5H4A9 247 aa5.67□□□□□ -1.5
GYPA-208ENST00000512064 BCAMP50895 628 aa5.67□□□□□ -1.5
GYPA-208ENST00000512064 FAM98CQ17RN3 349 aaKnown RBP5.67□□□□□ -1.5
GYPA-208ENST00000512064 NUDT18Q6ZVK8 323 aa5.67□□□□□ -1.5
GYPA-208ENST00000512064 TATDN2Q93075 761 aa5.67□□□□□ -1.5
GYPA-208ENST00000512064 GPCPD1Q9NPB8 672 aa5.67□□□□□ -1.5
GYPA-208ENST00000512064 SUPT5HO00267 1087 aaKnown RBP5.66□□□□□ -1.5
GYPA-208ENST00000512064 OATP04181 439 aa5.65□□□□□ -1.5
GYPA-208ENST00000512064 MS4A1P11836 297 aa5.65□□□□□ -1.5
GYPA-208ENST00000512064 NEUROD1Q13562 356 aa5.65□□□□□ -1.5
GYPA-208ENST00000512064 LRCH3Q96II8 777 aa5.65□□□□□ -1.5
GYPA-208ENST00000512064 PCMTD1Q96MG8 357 aaPredicted RBP5.65□□□□□ -1.5
GYPA-208ENST00000512064 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
GYPA-208ENST00000512064 A6NJR5 290 aa5.64□□□□□ -1.51
GYPA-208ENST00000512064 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
GYPA-208ENST00000512064 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.64□□□□□ -1.51
GYPA-208ENST00000512064 PDZRN3Q9UPQ7 1066 aa5.64□□□□□ -1.51
GYPA-208ENST00000512064 RNF40O75150 1001 aa5.63□□□□□ -1.51
GYPA-208ENST00000512064 HDGFP51858 240 aaKnown RBP5.63□□□□□ -1.51
GYPA-208ENST00000512064 SAMD7Q7Z3H4 446 aa5.63□□□□□ -1.51
GYPA-208ENST00000512064 METTL3Q86U44 580 aaKnown RBP5.63□□□□□ -1.51
GYPA-208ENST00000512064 TTC13Q8NBP0 860 aa5.63□□□□□ -1.51
GYPA-208ENST00000512064 WBP1LQ9NX94 342 aa5.63□□□□□ -1.51
GYPA-208ENST00000512064 HPS5Q9UPZ3 1129 aa5.63□□□□□ -1.51
GYPA-208ENST00000512064 SKIV2LQ15477 1246 aaKnown RBP5.62□□□□□ -1.51
GYPA-208ENST00000512064 DIXDC1Q155Q3 683 aa5.62□□□□□ -1.51
GYPA-208ENST00000512064 TREML4Q6UXN2 200 aa5.62□□□□□ -1.51
GYPA-208ENST00000512064 REPIN1Q9BWE0 567 aaKnown RBP5.62□□□□□ -1.51
GYPA-208ENST00000512064 STK17AQ9UEE5 414 aa5.62□□□□□ -1.51
GYPA-208ENST00000512064 PPP4CP60510 307 aa5.61□□□□□ -1.51
GYPA-208ENST00000512064 TRIM26Q12899 539 aaPredicted RBP5.61□□□□□ -1.51
GYPA-208ENST00000512064 FAM161AQ3B820 660 aa5.61□□□□□ -1.51
GYPA-208ENST00000512064 PCGF6Q9BYE7 350 aa5.61□□□□□ -1.51
GYPA-208ENST00000512064 FAM217BQ9NTX9 383 aaPredicted RBP5.61□□□□□ -1.51
GYPA-208ENST00000512064 TSR3Q9UJK0 312 aaKnown RBP5.61□□□□□ -1.51
GYPA-208ENST00000512064 SSTR3P32745 418 aaPredicted RBP5.6□□□□□ -1.51
GYPA-208ENST00000512064 MDM2Q00987 491 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms