RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 HSPA1LP34931 641 aa13.15□□□□□ -0.3
NR1I3-228ENST00000511676 SLC52A1Q9NWF4 448 aa13.15□□□□□ -0.3
NR1I3-228ENST00000511676 POLR1AO95602 1720 aaPredicted RBP13.15□□□□□ -0.3
NR1I3-228ENST00000511676 ARHGAP31Q2M1Z3 1444 aa13.14□□□□□ -0.31
NR1I3-228ENST00000511676 TONSLQ96HA7 1378 aa13.13□□□□□ -0.31
NR1I3-228ENST00000511676 EFCAB6Q5THR3 1501 aa13.12□□□□□ -0.31
NR1I3-228ENST00000511676 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
NR1I3-228ENST00000511676 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
NR1I3-228ENST00000511676 TRPM2O94759 1503 aa13.09□□□□□ -0.31
NR1I3-228ENST00000511676 BCANQ96GW7 911 aa13.09□□□□□ -0.31
NR1I3-228ENST00000511676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.31
NR1I3-228ENST00000511676 ERVK-7P63135 1459 aa13.09□□□□□ -0.31
NR1I3-228ENST00000511676 IQGAP1P46940 1657 aa13.08□□□□□ -0.31
NR1I3-228ENST00000511676 ABCC3O15438 1527 aa13.08□□□□□ -0.31
NR1I3-228ENST00000511676 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.32
NR1I3-228ENST00000511676 SIN3AQ96ST3 1273 aa13.08□□□□□ -0.32
NR1I3-228ENST00000511676 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
NR1I3-228ENST00000511676 KCNA6P17658 529 aa13.07□□□□□ -0.32
NR1I3-228ENST00000511676 E9PCH4 1651 aa13.07□□□□□ -0.32
NR1I3-228ENST00000511676 SYNMO15061 1565 aa13.07□□□□□ -0.32
NR1I3-228ENST00000511676 PPP1R15AO75807 674 aaPredicted RBP13.06□□□□□ -0.32
NR1I3-228ENST00000511676 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
NR1I3-228ENST00000511676 TMEM2Q9UHN6 1383 aa13.05□□□□□ -0.32
NR1I3-228ENST00000511676 SLIT1O75093 1534 aa13.04□□□□□ -0.32
NR1I3-228ENST00000511676 PROSER2Q86WR7 435 aaPredicted RBP13.04□□□□□ -0.32
NR1I3-228ENST00000511676 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
NR1I3-228ENST00000511676 SPHKAPQ2M3C7 1700 aa13.04□□□□□ -0.32
NR1I3-228ENST00000511676 FAM135BQ49AJ0 1406 aa13.04□□□□□ -0.32
NR1I3-228ENST00000511676 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
NR1I3-228ENST00000511676 ARHGAP23Q9P227 1491 aa13.02□□□□□ -0.33
NR1I3-228ENST00000511676 KDM5AP29375 1690 aaKnown RBP13.02□□□□□ -0.33
NR1I3-228ENST00000511676 LTKP29376 864 aa13.01□□□□□ -0.33
NR1I3-228ENST00000511676 IDI1Q13907 227 aa13.01□□□□□ -0.33
NR1I3-228ENST00000511676 MSH6P52701 1360 aa13.01□□□□□ -0.33
NR1I3-228ENST00000511676 NCOA3Q9Y6Q9 1424 aa13.01□□□□□ -0.33
NR1I3-228ENST00000511676 CEP152O94986 1710 aa13.01□□□□□ -0.33
NR1I3-228ENST00000511676 MED1Q15648 1581 aaPredicted RBP13□□□□□ -0.33
NR1I3-228ENST00000511676 NOS1P29475 1434 aa12.99□□□□□ -0.33
NR1I3-228ENST00000511676 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
NR1I3-228ENST00000511676 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
NR1I3-228ENST00000511676 UBR1Q8IWV7 1749 aa12.97□□□□□ -0.33
NR1I3-228ENST00000511676 CADPS2Q86UW7 1296 aa12.97□□□□□ -0.33
NR1I3-228ENST00000511676 TBX22Q9Y458 520 aa12.97□□□□□ -0.33
NR1I3-228ENST00000511676 CLTCL1P53675 1640 aa12.96□□□□□ -0.33
NR1I3-228ENST00000511676 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
NR1I3-228ENST00000511676 C14orf37Q86TY3 774 aa12.96□□□□□ -0.33
NR1I3-228ENST00000511676 SLAIN2Q9P270 581 aa12.96□□□□□ -0.33
NR1I3-228ENST00000511676 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
NR1I3-228ENST00000511676 ATF3P18847 181 aa12.95□□□□□ -0.34
NR1I3-228ENST00000511676 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
NR1I3-228ENST00000511676 NKTRP30414 1462 aaKnown RBP12.95□□□□□ -0.34
NR1I3-228ENST00000511676 CFAP65Q6ZU64 1925 aaKnown RBP12.95□□□□□ -0.34
NR1I3-228ENST00000511676 TMEM94Q12767 1356 aa12.94□□□□□ -0.34
NR1I3-228ENST00000511676 PIK3R4Q99570 1358 aa12.94□□□□□ -0.34
NR1I3-228ENST00000511676 ADGRB3O60242 1522 aa12.94□□□□□ -0.34
NR1I3-228ENST00000511676 RALGAPBQ86X10 1494 aa12.94□□□□□ -0.34
NR1I3-228ENST00000511676 ZNF772Q68DY9 489 aaPredicted RBP12.93□□□□□ -0.34
NR1I3-228ENST00000511676 SLC26A8Q96RN1 970 aa12.93□□□□□ -0.34
NR1I3-228ENST00000511676 C19orf44Q9H6X5 657 aa12.93□□□□□ -0.34
NR1I3-228ENST00000511676 PLEKHG1Q9ULL1 1385 aa12.93□□□□□ -0.34
NR1I3-228ENST00000511676 MYOM2P54296 1465 aa12.92□□□□□ -0.34
NR1I3-228ENST00000511676 JCADQ9P266 1359 aa12.92□□□□□ -0.34
NR1I3-228ENST00000511676 SPATA31A6Q5VVP1 1343 aa12.91□□□□□ -0.34
NR1I3-228ENST00000511676 PRAG1Q86YV5 1406 aa12.91□□□□□ -0.34
NR1I3-228ENST00000511676 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
NR1I3-228ENST00000511676 LAMC1P11047 1609 aa12.91□□□□□ -0.34
NR1I3-228ENST00000511676 KIF1BO60333 1816 aa12.9□□□□□ -0.34
NR1I3-228ENST00000511676 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
NR1I3-228ENST00000511676 MEX3CQ5U5Q3 659 aaKnown RBP12.89□□□□□ -0.35
NR1I3-228ENST00000511676 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
NR1I3-228ENST00000511676 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
NR1I3-228ENST00000511676 KIAA1210Q9ULL0 1709 aa12.87□□□□□ -0.35
NR1I3-228ENST00000511676 IFT172Q9UG01 1749 aa12.86□□□□□ -0.35
NR1I3-228ENST00000511676 DCAF11Q8TEB1 546 aa12.86□□□□□ -0.35
NR1I3-228ENST00000511676 TRPM1Q7Z4N2 1603 aa12.86□□□□□ -0.35
NR1I3-228ENST00000511676 ZFYVE9O95405 1425 aa12.86□□□□□ -0.35
NR1I3-228ENST00000511676 RIMS2Q9UQ26 1411 aa12.86□□□□□ -0.35
NR1I3-228ENST00000511676 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
NR1I3-228ENST00000511676 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
NR1I3-228ENST00000511676 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
NR1I3-228ENST00000511676 DIP2AQ14689 1571 aa12.83□□□□□ -0.36
NR1I3-228ENST00000511676 LRRC59Q96AG4 307 aaKnown RBP12.83□□□□□ -0.36
NR1I3-228ENST00000511676 STRCP1A6NGW2 1772 aa12.83□□□□□ -0.36
NR1I3-228ENST00000511676 TMEM131LA2VDJ0 1609 aa12.82□□□□□ -0.36
NR1I3-228ENST00000511676 ALKQ9UM73 1620 aa12.82□□□□□ -0.36
NR1I3-228ENST00000511676 ZNF326Q5BKZ1 582 aaKnown RBP12.82□□□□□ -0.36
NR1I3-228ENST00000511676 VGFO15240 615 aaPredicted RBP12.81□□□□□ -0.36
NR1I3-228ENST00000511676 AMOTL2Q9Y2J4 779 aa12.81□□□□□ -0.36
NR1I3-228ENST00000511676 PPLO60437 1756 aa12.81□□□□□ -0.36
NR1I3-228ENST00000511676 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
NR1I3-228ENST00000511676 DCCP43146 1447 aa12.8□□□□□ -0.36
NR1I3-228ENST00000511676 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
NR1I3-228ENST00000511676 RXRBP28702 533 aa12.8□□□□□ -0.36
NR1I3-228ENST00000511676 RGL3Q3MIN7 710 aa12.8□□□□□ -0.36
NR1I3-228ENST00000511676 RGS17Q9UGC6 210 aaPredicted RBP12.8□□□□□ -0.36
NR1I3-228ENST00000511676 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
NR1I3-228ENST00000511676 ROCK2O75116 1388 aaKnown RBP12.8□□□□□ -0.36
NR1I3-228ENST00000511676 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
NR1I3-228ENST00000511676 USP47Q96K76 1375 aa12.79□□□□□ -0.36
NR1I3-228ENST00000511676 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms