RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 METTL3Q86U44 580 aaKnown RBP7.59□□□□□ -1.19
CHD1-207ENST00000511628 PXYLP1Q8TE99 480 aa7.59□□□□□ -1.19
CHD1-207ENST00000511628 BCANQ96GW7 911 aa7.59□□□□□ -1.19
CHD1-207ENST00000511628 PRR14Q9BWN1 585 aa7.59□□□□□ -1.19
CHD1-207ENST00000511628 TMEM134Q9H6X4 195 aa7.59□□□□□ -1.19
CHD1-207ENST00000511628 MAP2K5Q13163 448 aa7.57□□□□□ -1.2
CHD1-207ENST00000511628 KMT5BQ4FZB7 885 aa7.57□□□□□ -1.2
CHD1-207ENST00000511628 MINK1Q8N4C8 1332 aaPredicted RBP7.56□□□□□ -1.2
CHD1-207ENST00000511628 RDH13Q8NBN7 331 aa7.56□□□□□ -1.2
CHD1-207ENST00000511628 KCNC4Q03721 635 aa7.55□□□□□ -1.2
CHD1-207ENST00000511628 DDX11L8A8MPP1 907 aa7.54□□□□□ -1.2
CHD1-207ENST00000511628 IRF6O14896 467 aa7.54□□□□□ -1.2
CHD1-207ENST00000511628 SULF1Q8IWU6 871 aa7.54□□□□□ -1.2
CHD1-207ENST00000511628 NLRP7Q8WX94 980 aa7.54□□□□□ -1.2
CHD1-207ENST00000511628 DAXXQ9UER7 740 aaPredicted RBP7.54□□□□□ -1.2
CHD1-207ENST00000511628 CFHP08603 1231 aa7.53□□□□□ -1.2
CHD1-207ENST00000511628 APLP1P51693 650 aa7.53□□□□□ -1.2
CHD1-207ENST00000511628 PCDHB3Q9Y5E6 796 aa7.53□□□□□ -1.2
CHD1-207ENST00000511628 COPS2P61201 443 aa7.52□□□□□ -1.21
CHD1-207ENST00000511628 ZC3H15Q8WU90 426 aaKnown RBP7.52□□□□□ -1.21
CHD1-207ENST00000511628 CCDC102AQ96A19 550 aa7.52□□□□□ -1.21
CHD1-207ENST00000511628 MTRQ99707 1265 aa7.51□□□□□ -1.21
CHD1-207ENST00000511628 IL21Q9HBE4 155 aa7.51□□□□□ -1.21
CHD1-207ENST00000511628 ITGBL1O95965 494 aaPredicted RBP7.5□□□□□ -1.21
CHD1-207ENST00000511628 MDM2Q00987 491 aaPredicted RBP7.5□□□□□ -1.21
CHD1-207ENST00000511628 BARGINQ6ZT62 677 aa7.49□□□□□ -1.21
CHD1-207ENST00000511628 ZMYND10O75800 440 aa7.48□□□□□ -1.21
CHD1-207ENST00000511628 SLC10A3P09131 477 aa7.48□□□□□ -1.21
CHD1-207ENST00000511628 TTLL12Q14166 644 aaPredicted RBP7.48□□□□□ -1.21
CHD1-207ENST00000511628 PHOX2BQ99453 314 aa7.48□□□□□ -1.21
CHD1-207ENST00000511628 ACTN4O43707 911 aaKnown RBP7.47□□□□□ -1.21
CHD1-207ENST00000511628 CLCN1P35523 988 aa7.47□□□□□ -1.21
CHD1-207ENST00000511628 TJAP1Q5JTD0 557 aa7.47□□□□□ -1.21
CHD1-207ENST00000511628 IFFO2Q5TF58 517 aa7.47□□□□□ -1.21
CHD1-207ENST00000511628 NR1I2O75469 434 aa7.46□□□□□ -1.22
CHD1-207ENST00000511628 BLOC1S3Q6QNY0 202 aa7.46□□□□□ -1.22
CHD1-207ENST00000511628 A0A0G2JS52 829 aa7.45□□□□□ -1.22
CHD1-207ENST00000511628 GGCXP38435 758 aa7.45□□□□□ -1.22
CHD1-207ENST00000511628 GRIPAP1Q4V328 841 aa7.45□□□□□ -1.22
CHD1-207ENST00000511628 ZNF516Q92618 1163 aa7.45□□□□□ -1.22
CHD1-207ENST00000511628 GPCPD1Q9NPB8 672 aa7.45□□□□□ -1.22
CHD1-207ENST00000511628 ZPR1O75312 459 aa7.44□□□□□ -1.22
CHD1-207ENST00000511628 PUS10Q3MIT2 529 aaKnown RBP7.43□□□□□ -1.22
CHD1-207ENST00000511628 AK7Q96M32 723 aa7.43□□□□□ -1.22
CHD1-207ENST00000511628 GCGRP47871 477 aa7.42□□□□□ -1.22
CHD1-207ENST00000511628 ATP6V1AP38606 617 aa7.41□□□□□ -1.22
CHD1-207ENST00000511628 FUT2Q10981 343 aa7.41□□□□□ -1.22
CHD1-207ENST00000511628 NUTM1Q86Y26 1132 aa7.41□□□□□ -1.22
CHD1-207ENST00000511628 NKX2-3Q8TAU0 364 aa7.4□□□□□ -1.22
CHD1-207ENST00000511628 KDM4AO75164 1064 aa7.39□□□□□ -1.23
CHD1-207ENST00000511628 CD46P15529 392 aa7.39□□□□□ -1.23
CHD1-207ENST00000511628 SLC24A3Q9HC58 644 aa7.39□□□□□ -1.23
CHD1-207ENST00000511628 FAM217BQ9NTX9 383 aaPredicted RBP7.39□□□□□ -1.23
CHD1-207ENST00000511628 TRIM66O15016 1216 aa7.38□□□□□ -1.23
CHD1-207ENST00000511628 TLL1O43897 1013 aa7.38□□□□□ -1.23
CHD1-207ENST00000511628 RGS20O76081 388 aa7.38□□□□□ -1.23
CHD1-207ENST00000511628 SSTR3P32745 418 aaPredicted RBP7.38□□□□□ -1.23
CHD1-207ENST00000511628 PPP1R18Q6NYC8 613 aa7.38□□□□□ -1.23
CHD1-207ENST00000511628 SCUBE3Q8IX30 993 aa7.38□□□□□ -1.23
CHD1-207ENST00000511628 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.38□□□□□ -1.23
CHD1-207ENST00000511628 ADH1BP00325 375 aa7.37□□□□□ -1.23
CHD1-207ENST00000511628 USP46P62068 366 aa7.37□□□□□ -1.23
CHD1-207ENST00000511628 AMHR2Q16671 573 aa7.37□□□□□ -1.23
CHD1-207ENST00000511628 GIGYF2Q6Y7W6 1299 aaKnown RBP7.37□□□□□ -1.23
CHD1-207ENST00000511628 FMNL1O95466 1100 aaPredicted RBP7.36□□□□□ -1.23
CHD1-207ENST00000511628 Q3C1V9 767 aa7.36□□□□□ -1.23
CHD1-207ENST00000511628 MORN1Q5T089 497 aa7.36□□□□□ -1.23
CHD1-207ENST00000511628 SPSB2Q99619 263 aa7.36□□□□□ -1.23
CHD1-207ENST00000511628 SLC6A16Q9GZN6 736 aa7.35□□□□□ -1.23
CHD1-207ENST00000511628 SLC27A5Q9Y2P5 690 aa7.35□□□□□ -1.23
CHD1-207ENST00000511628 PDE4DQ08499 809 aa7.34□□□□□ -1.23
CHD1-207ENST00000511628 TMUB1Q9BVT8 246 aa7.34□□□□□ -1.23
CHD1-207ENST00000511628 S1PR4O95977 384 aa7.33□□□□□ -1.24
CHD1-207ENST00000511628 PARP9Q8IXQ6 854 aa7.33□□□□□ -1.24
CHD1-207ENST00000511628 BEGAINQ9BUH8 593 aa7.33□□□□□ -1.24
CHD1-207ENST00000511628 REPIN1Q9BWE0 567 aaKnown RBP7.33□□□□□ -1.24
CHD1-207ENST00000511628 PRKCSHP14314 528 aaPredicted RBP7.32□□□□□ -1.24
CHD1-207ENST00000511628 PRKD2Q9BZL6 878 aa7.32□□□□□ -1.24
CHD1-207ENST00000511628 HOXA2O43364 376 aa7.31□□□□□ -1.24
CHD1-207ENST00000511628 DIXDC1Q155Q3 683 aa7.31□□□□□ -1.24
CHD1-207ENST00000511628 RNF223E7ERA6 249 aa7.3□□□□□ -1.24
CHD1-207ENST00000511628 ATP1B4Q9UN42 357 aaPredicted RBP7.3□□□□□ -1.24
CHD1-207ENST00000511628 C6orf229H3BNL8 230 aa7.29□□□□□ -1.24
CHD1-207ENST00000511628 PPEF1O14829 653 aaPredicted RBP7.29□□□□□ -1.24
CHD1-207ENST00000511628 FDX1P10109 184 aa7.29□□□□□ -1.24
CHD1-207ENST00000511628 ANKLE1Q8NAG6 615 aa7.29□□□□□ -1.24
CHD1-207ENST00000511628 IRX2Q9BZI1 471 aaPredicted RBP7.29□□□□□ -1.24
CHD1-207ENST00000511628 SALL2Q9Y467 1007 aaPredicted RBP7.29□□□□□ -1.24
CHD1-207ENST00000511628 GUCA2AQ02747 115 aa7.28□□□□□ -1.24
CHD1-207ENST00000511628 BRICD5Q6PL45 260 aa7.28□□□□□ -1.24
CHD1-207ENST00000511628 RNF19BQ6ZMZ0 732 aa7.28□□□□□ -1.24
CHD1-207ENST00000511628 SPIRE2Q8WWL2 714 aa7.28□□□□□ -1.24
CHD1-207ENST00000511628 HLA-CQ95604 372 aa7.28□□□□□ -1.24
CHD1-207ENST00000511628 USB1Q9BQ65 265 aaKnown RBP7.28□□□□□ -1.24
CHD1-207ENST00000511628 MS4A1P11836 297 aa7.27□□□□□ -1.25
CHD1-207ENST00000511628 SLC19A1P41440 591 aa7.27□□□□□ -1.25
CHD1-207ENST00000511628 THAP11Q96EK4 314 aa7.27□□□□□ -1.25
CHD1-207ENST00000511628 V9GY48 417 aaPredicted RBP7.27□□□□□ -1.25
CHD1-207ENST00000511628 ZBTB24O43167 697 aaPredicted RBP7.26□□□□□ -1.25
CHD1-207ENST00000511628 TBC1D2Q9BYX2 928 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms