RNA–Protein interactions for RNA: ENST00000511498.1

IFT122-223, Transcript of intraflagellar transport 122, human

TSL 4

Gene IFT122, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-223	ENST00000511498	KANK1	Q14678	1352 aa		13.1	□□□□□ -0.31
IFT122-223	ENST00000511498	MROH1	Q8NDA8	1641 aa		13.1	□□□□□ -0.31
IFT122-223	ENST00000511498	USP47	Q96K76	1375 aa		13.09	□□□□□ -0.31
IFT122-223	ENST00000511498	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.09	□□□□□ -0.31
IFT122-223	ENST00000511498	ESF1	Q9H501	851 aa	Known RBP	13.09	□□□□□ -0.31
IFT122-223	ENST00000511498	WASHC2A	Q641Q2	1341 aa		13.09	□□□□□ -0.31
IFT122-223	ENST00000511498	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
IFT122-223	ENST00000511498	LMTK2	Q8IWU2	1503 aa		13.08	□□□□□ -0.32
IFT122-223	ENST00000511498	ZMYM3	Q14202	1370 aa		13.07	□□□□□ -0.32
IFT122-223	ENST00000511498	PRAG1	Q86YV5	1406 aa		13.07	□□□□□ -0.32
IFT122-223	ENST00000511498	ROCK2	O75116	1388 aa	Known RBP	13.07	□□□□□ -0.32
IFT122-223	ENST00000511498	DHX29	Q7Z478	1369 aa	Known RBP	13.07	□□□□□ -0.32
IFT122-223	ENST00000511498	A2M	P01023	1474 aa		13.06	□□□□□ -0.32
IFT122-223	ENST00000511498	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.06	□□□□□ -0.32
IFT122-223	ENST00000511498	EFCAB6	Q5THR3	1501 aa		13.06	□□□□□ -0.32
IFT122-223	ENST00000511498	KIAA1210	Q9ULL0	1709 aa		13.05	□□□□□ -0.32
IFT122-223	ENST00000511498	AFAP1	Q8N556	730 aa		13.05	□□□□□ -0.32
IFT122-223	ENST00000511498	SYNM	O15061	1565 aa		13.05	□□□□□ -0.32
IFT122-223	ENST00000511498	CLTCL1	P53675	1640 aa		13.05	□□□□□ -0.32
IFT122-223	ENST00000511498	A2ML1	A8K2U0	1454 aa		13.04	□□□□□ -0.32
IFT122-223	ENST00000511498	KIF1B	O60333	1816 aa		13.04	□□□□□ -0.32
IFT122-223	ENST00000511498	STAC3	Q96MF2	364 aa		13.04	□□□□□ -0.32
IFT122-223	ENST00000511498	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
IFT122-223	ENST00000511498	ZC3H13	Q5T200	1668 aa	Known RBP	13.04	□□□□□ -0.32
IFT122-223	ENST00000511498	GPRASP1	Q5JY77	1395 aa		13.04	□□□□□ -0.32
IFT122-223	ENST00000511498	LRRC7	Q96NW7	1537 aa		13.03	□□□□□ -0.32
IFT122-223	ENST00000511498	STRCP1	A6NGW2	1772 aa		13.03	□□□□□ -0.32
IFT122-223	ENST00000511498	GTF3C3	Q9Y5Q9	886 aa		13.03	□□□□□ -0.32
IFT122-223	ENST00000511498	CLTC	Q00610	1675 aa	Known RBP	13.02	□□□□□ -0.33
IFT122-223	ENST00000511498	IFT172	Q9UG01	1749 aa		13.02	□□□□□ -0.33
IFT122-223	ENST00000511498	KIF7	Q2M1P5	1343 aa		13.01	□□□□□ -0.33
IFT122-223	ENST00000511498	IQGAP1	P46940	1657 aa		13.01	□□□□□ -0.33
IFT122-223	ENST00000511498	ZNF326	Q5BKZ1	582 aa	Known RBP	13	□□□□□ -0.33
IFT122-223	ENST00000511498	DCAF11	Q8TEB1	546 aa		13	□□□□□ -0.33
IFT122-223	ENST00000511498	CARD11	Q9BXL7	1154 aa		13	□□□□□ -0.33
IFT122-223	ENST00000511498	MED14	O60244	1454 aa		12.99	□□□□□ -0.33
IFT122-223	ENST00000511498	MYOM2	P54296	1465 aa		12.97	□□□□□ -0.33
IFT122-223	ENST00000511498	MYT1L	Q9UL68	1186 aa		12.96	□□□□□ -0.33
IFT122-223	ENST00000511498	KIF3B	O15066	747 aa		12.95	□□□□□ -0.34
IFT122-223	ENST00000511498	FAM135B	Q49AJ0	1406 aa		12.95	□□□□□ -0.34
IFT122-223	ENST00000511498	ADGRB3	O60242	1522 aa		12.94	□□□□□ -0.34
IFT122-223	ENST00000511498	C11orf95	C9JLR9	678 aa	Predicted RBP	12.94	□□□□□ -0.34
IFT122-223	ENST00000511498	MSH5	O43196	834 aa		12.94	□□□□□ -0.34
IFT122-223	ENST00000511498	KDM2A	Q9Y2K7	1162 aa		12.94	□□□□□ -0.34
IFT122-223	ENST00000511498	NPHP4	O75161	1426 aa	Predicted RBP	12.94	□□□□□ -0.34
IFT122-223	ENST00000511498	KTN1	Q86UP2	1357 aa	Known RBP	12.94	□□□□□ -0.34
IFT122-223	ENST00000511498	ABCC3	O15438	1527 aa		12.93	□□□□□ -0.34
IFT122-223	ENST00000511498	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.92	□□□□□ -0.34
IFT122-223	ENST00000511498	XIRP1	Q702N8	1843 aa	Known RBP	12.92	□□□□□ -0.34
IFT122-223	ENST00000511498	PPL	O60437	1756 aa		12.92	□□□□□ -0.34
IFT122-223	ENST00000511498	PIK3C2B	O00750	1634 aa		12.91	□□□□□ -0.34
IFT122-223	ENST00000511498	RGL3	Q3MIN7	710 aa		12.9	□□□□□ -0.34
IFT122-223	ENST00000511498	SCAF11	Q99590	1463 aa	Known RBP	12.89	□□□□□ -0.35
IFT122-223	ENST00000511498	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.89	□□□□□ -0.35
IFT122-223	ENST00000511498	SETBP1	Q9Y6X0	1596 aa		12.89	□□□□□ -0.35
IFT122-223	ENST00000511498	ST20-MTHFS	A0A0A6YYL1	179 aa		12.88	□□□□□ -0.35
IFT122-223	ENST00000511498	EIF3A	Q14152	1382 aa	Known RBP	12.88	□□□□□ -0.35
IFT122-223	ENST00000511498	NRXN1	Q9ULB1	1477 aa		12.88	□□□□□ -0.35
IFT122-223	ENST00000511498	ARHGAP31	Q2M1Z3	1444 aa		12.88	□□□□□ -0.35
IFT122-223	ENST00000511498	ROBO1	Q9Y6N7	1651 aa		12.87	□□□□□ -0.35
IFT122-223	ENST00000511498	ANKLE2	Q86XL3	938 aa		12.87	□□□□□ -0.35
IFT122-223	ENST00000511498	UGGT1	Q9NYU2	1555 aa		12.86	□□□□□ -0.35
IFT122-223	ENST00000511498	EP400	Q96L91	3159 aa		12.86	□□□□□ -0.35
IFT122-223	ENST00000511498	KDM5A	P29375	1690 aa	Known RBP	12.86	□□□□□ -0.35
IFT122-223	ENST00000511498	SLC24A1	O60721	1099 aa		12.85	□□□□□ -0.35
IFT122-223	ENST00000511498	TNR	Q92752	1358 aa		12.84	□□□□□ -0.35
IFT122-223	ENST00000511498	NOS1	P29475	1434 aa		12.84	□□□□□ -0.35
IFT122-223	ENST00000511498	LRP6	O75581	1613 aa		12.84	□□□□□ -0.35
IFT122-223	ENST00000511498	WASHC2C	Q9Y4E1	1318 aa		12.83	□□□□□ -0.36
IFT122-223	ENST00000511498	TMF1	P82094	1093 aa		12.82	□□□□□ -0.36
IFT122-223	ENST00000511498	NBPF1	Q3BBV0	1214 aa		12.82	□□□□□ -0.36
IFT122-223	ENST00000511498	MRS2	Q9HD23	443 aa		12.82	□□□□□ -0.36
IFT122-223	ENST00000511498	NLRP1	Q9C000	1473 aa		12.82	□□□□□ -0.36
IFT122-223	ENST00000511498	MYOM1	P52179	1685 aa		12.82	□□□□□ -0.36
IFT122-223	ENST00000511498	JCAD	Q9P266	1359 aa		12.81	□□□□□ -0.36
IFT122-223	ENST00000511498	RALBP1	Q15311	655 aa		12.81	□□□□□ -0.36
IFT122-223	ENST00000511498	CDCA8	Q53HL2	280 aa		12.81	□□□□□ -0.36
IFT122-223	ENST00000511498	RPGRIP1L	Q68CZ1	1315 aa		12.81	□□□□□ -0.36
IFT122-223	ENST00000511498	ZNF772	Q68DY9	489 aa	Predicted RBP	12.8	□□□□□ -0.36
IFT122-223	ENST00000511498	TESK2	Q96S53	571 aa		12.8	□□□□□ -0.36
IFT122-223	ENST00000511498	POLR3GL	Q9BT43	218 aa		12.8	□□□□□ -0.36
IFT122-223	ENST00000511498	BRD4	O60885	1362 aa	Predicted RBP	12.8	□□□□□ -0.36
IFT122-223	ENST00000511498	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
IFT122-223	ENST00000511498	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.79	□□□□□ -0.36
IFT122-223	ENST00000511498	COL16A1	Q07092	1604 aa	Predicted RBP	12.78	□□□□□ -0.36
IFT122-223	ENST00000511498	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.78	□□□□□ -0.36
IFT122-223	ENST00000511498	SBNO2	Q9Y2G9	1366 aa		12.78	□□□□□ -0.36
IFT122-223	ENST00000511498	PIK3C2G	O75747	1445 aa		12.78	□□□□□ -0.36
IFT122-223	ENST00000511498	NEXMIF	Q5QGS0	1516 aa		12.78	□□□□□ -0.36
IFT122-223	ENST00000511498	PHLPP1	O60346	1717 aa		12.77	□□□□□ -0.36
IFT122-223	ENST00000511498	GGT6	Q6P531	493 aa		12.77	□□□□□ -0.37
IFT122-223	ENST00000511498	PELP1	Q8IZL8	1130 aa	Known RBP	12.77	□□□□□ -0.37
IFT122-223	ENST00000511498	CFAP65	Q6ZU64	1925 aa	Known RBP	12.77	□□□□□ -0.37
IFT122-223	ENST00000511498	ZBED9	Q6R2W3	1325 aa		12.77	□□□□□ -0.37
IFT122-223	ENST00000511498	PARD3	Q8TEW0	1356 aa		12.77	□□□□□ -0.37
IFT122-223	ENST00000511498	QRICH2	Q9H0J4	1663 aa		12.77	□□□□□ -0.37
IFT122-223	ENST00000511498	NEFL	P07196	543 aa		12.76	□□□□□ -0.37
IFT122-223	ENST00000511498	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.76	□□□□□ -0.37
IFT122-223	ENST00000511498	RGS12	O14924	1447 aa		12.75	□□□□□ -0.37
IFT122-223	ENST00000511498	ZFYVE9	O95405	1425 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms