RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 GGCXP38435 758 aa8.59□□□□□ -1.03
TOPBP1-208ENST00000511439 RCCD1A6NED2 376 aa8.58□□□□□ -1.04
TOPBP1-208ENST00000511439 KMT5BQ4FZB7 885 aa8.58□□□□□ -1.04
TOPBP1-208ENST00000511439 LAPTM4AQ15012 233 aa8.57□□□□□ -1.04
TOPBP1-208ENST00000511439 PCDHB3Q9Y5E6 796 aa8.57□□□□□ -1.04
TOPBP1-208ENST00000511439 COPS2P61201 443 aa8.56□□□□□ -1.04
TOPBP1-208ENST00000511439 RSPH4AQ5TD94 716 aa8.56□□□□□ -1.04
TOPBP1-208ENST00000511439 PPP1R18Q6NYC8 613 aa8.56□□□□□ -1.04
TOPBP1-208ENST00000511439 ZNF516Q92618 1163 aa8.56□□□□□ -1.04
TOPBP1-208ENST00000511439 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.56□□□□□ -1.04
TOPBP1-208ENST00000511439 ZPR1O75312 459 aa8.55□□□□□ -1.04
TOPBP1-208ENST00000511439 TMUB1Q9BVT8 246 aa8.55□□□□□ -1.04
TOPBP1-208ENST00000511439 PXYLP1Q8TE99 480 aa8.54□□□□□ -1.04
TOPBP1-208ENST00000511439 V9GY48 417 aaPredicted RBP8.54□□□□□ -1.04
TOPBP1-208ENST00000511439 GNPATO15228 680 aa8.53□□□□□ -1.04
TOPBP1-208ENST00000511439 ACTN4O43707 911 aaKnown RBP8.53□□□□□ -1.04
TOPBP1-208ENST00000511439 RBM26Q5T8P6 1007 aaKnown RBP8.53□□□□□ -1.04
TOPBP1-208ENST00000511439 FAM161AQ3B820 660 aa8.52□□□□□ -1.05
TOPBP1-208ENST00000511439 PRKD2Q9BZL6 878 aa8.52□□□□□ -1.05
TOPBP1-208ENST00000511439 CFHP08603 1231 aa8.51□□□□□ -1.05
TOPBP1-208ENST00000511439 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-208ENST00000511439 TULP1O00294 542 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-208ENST00000511439 BLOC1S3Q6QNY0 202 aa8.5□□□□□ -1.05
TOPBP1-208ENST00000511439 Q6ZNB5 142 aa8.5□□□□□ -1.05
TOPBP1-208ENST00000511439 NKX2-3Q8TAU0 364 aa8.5□□□□□ -1.05
TOPBP1-208ENST00000511439 NR1I2O75469 434 aa8.48□□□□□ -1.05
TOPBP1-208ENST00000511439 GPIHBP1Q8IV16 184 aa8.48□□□□□ -1.05
TOPBP1-208ENST00000511439 SLC10A3P09131 477 aa8.47□□□□□ -1.05
TOPBP1-208ENST00000511439 GPR37O15354 613 aa8.46□□□□□ -1.06
TOPBP1-208ENST00000511439 GFRA3O60609 400 aa8.46□□□□□ -1.06
TOPBP1-208ENST00000511439 DAXXQ9UER7 740 aaPredicted RBP8.46□□□□□ -1.06
TOPBP1-208ENST00000511439 SULF1Q8IWU6 871 aa8.45□□□□□ -1.06
TOPBP1-208ENST00000511439 NRG2O14511 850 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-208ENST00000511439 FECHP22830 423 aa8.44□□□□□ -1.06
TOPBP1-208ENST00000511439 ADH1BP00325 375 aa8.43□□□□□ -1.06
TOPBP1-208ENST00000511439 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
TOPBP1-208ENST00000511439 RNF223E7ERA6 249 aa8.42□□□□□ -1.06
TOPBP1-208ENST00000511439 RDH13Q8NBN7 331 aa8.42□□□□□ -1.06
TOPBP1-208ENST00000511439 TLL1O43897 1013 aa8.41□□□□□ -1.06
TOPBP1-208ENST00000511439 DDX11L8A8MPP1 907 aa8.4□□□□□ -1.06
TOPBP1-208ENST00000511439 SCUBE3Q8IX30 993 aa8.4□□□□□ -1.06
TOPBP1-208ENST00000511439 SLC6A16Q9GZN6 736 aa8.4□□□□□ -1.06
TOPBP1-208ENST00000511439 S1PR4O95977 384 aa8.39□□□□□ -1.07
TOPBP1-208ENST00000511439 SLC19A1P41440 591 aa8.39□□□□□ -1.07
TOPBP1-208ENST00000511439 PDZRN3Q9UPQ7 1066 aa8.39□□□□□ -1.07
TOPBP1-208ENST00000511439 TRAF7Q6Q0C0 670 aa8.38□□□□□ -1.07
TOPBP1-208ENST00000511439 ATP6V1AP38606 617 aa8.37□□□□□ -1.07
TOPBP1-208ENST00000511439 MAP2K5Q13163 448 aa8.37□□□□□ -1.07
TOPBP1-208ENST00000511439 GRIPAP1Q4V328 841 aa8.37□□□□□ -1.07
TOPBP1-208ENST00000511439 BCANQ96GW7 911 aa8.37□□□□□ -1.07
TOPBP1-208ENST00000511439 SPSB2Q99619 263 aa8.37□□□□□ -1.07
TOPBP1-208ENST00000511439 GCGRP47871 477 aa8.36□□□□□ -1.07
TOPBP1-208ENST00000511439 PUS10Q3MIT2 529 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-208ENST00000511439 ABCC9O60706 1549 aa8.35□□□□□ -1.07
TOPBP1-208ENST00000511439 FUT2Q10981 343 aa8.35□□□□□ -1.07
TOPBP1-208ENST00000511439 MORN1Q5T089 497 aa8.35□□□□□ -1.07
TOPBP1-208ENST00000511439 SPRYD7Q5W111 196 aa8.35□□□□□ -1.07
TOPBP1-208ENST00000511439 ZNF598Q86UK7 904 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-208ENST00000511439 PHOX2BQ99453 314 aa8.34□□□□□ -1.07
TOPBP1-208ENST00000511439 SALL2Q9Y467 1007 aaPredicted RBP8.34□□□□□ -1.07
TOPBP1-208ENST00000511439 MINK1Q8N4C8 1332 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-208ENST00000511439 PPEF1O14829 653 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-208ENST00000511439 FMNL1O95466 1100 aaPredicted RBP8.33□□□□□ -1.08
TOPBP1-208ENST00000511439 NLRP7Q8WX94 980 aa8.33□□□□□ -1.08
TOPBP1-208ENST00000511439 PRR20EP86478 221 aa8.32□□□□□ -1.08
TOPBP1-208ENST00000511439 PRR20CP86479 221 aa8.32□□□□□ -1.08
TOPBP1-208ENST00000511439 PRR20DP86480 221 aa8.32□□□□□ -1.08
TOPBP1-208ENST00000511439 PRR20BP86481 221 aa8.32□□□□□ -1.08
TOPBP1-208ENST00000511439 PRR20AP86496 221 aa8.32□□□□□ -1.08
TOPBP1-208ENST00000511439 IRF6O14896 467 aa8.31□□□□□ -1.08
TOPBP1-208ENST00000511439 ZNF697Q5TEC3 545 aa8.31□□□□□ -1.08
TOPBP1-208ENST00000511439 Q3C1V9 767 aa8.3□□□□□ -1.08
TOPBP1-208ENST00000511439 LIAT1Q6ZQX7 453 aa8.3□□□□□ -1.08
TOPBP1-208ENST00000511439 EMID1Q96A84 441 aaPredicted RBP8.3□□□□□ -1.08
TOPBP1-208ENST00000511439 THAP11Q96EK4 314 aa8.3□□□□□ -1.08
TOPBP1-208ENST00000511439 SLC27A5Q9Y2P5 690 aa8.3□□□□□ -1.08
TOPBP1-208ENST00000511439 CD46P15529 392 aa8.29□□□□□ -1.08
TOPBP1-208ENST00000511439 LMOD2Q6P5Q4 547 aa8.29□□□□□ -1.08
TOPBP1-208ENST00000511439 RPIAP49247 311 aa8.28□□□□□ -1.08
TOPBP1-208ENST00000511439 TRIM67Q6ZTA4 783 aa8.28□□□□□ -1.08
TOPBP1-208ENST00000511439 LCE2BO14633 110 aa8.27□□□□□ -1.09
TOPBP1-208ENST00000511439 DGAT1O75907 488 aa8.27□□□□□ -1.09
TOPBP1-208ENST00000511439 USP46P62068 366 aa8.27□□□□□ -1.09
TOPBP1-208ENST00000511439 MSS51Q4VC12 460 aa8.27□□□□□ -1.09
TOPBP1-208ENST00000511439 PKDCCQ504Y2 493 aa8.27□□□□□ -1.09
TOPBP1-208ENST00000511439 BRICD5Q6PL45 260 aa8.27□□□□□ -1.09
TOPBP1-208ENST00000511439 KDM4AO75164 1064 aa8.26□□□□□ -1.09
TOPBP1-208ENST00000511439 CD2BP2O95400 341 aaKnown RBP8.26□□□□□ -1.09
TOPBP1-208ENST00000511439 CLCN1P35523 988 aa8.26□□□□□ -1.09
TOPBP1-208ENST00000511439 MDM2Q00987 491 aaPredicted RBP8.26□□□□□ -1.09
TOPBP1-208ENST00000511439 PLA2G2CQ5R387 149 aa8.26□□□□□ -1.09
TOPBP1-208ENST00000511439 FCF1Q9Y324 198 aaKnown RBP8.26□□□□□ -1.09
TOPBP1-208ENST00000511439 FAM160A2Q8N612 972 aaPredicted RBP8.25□□□□□ -1.09
TOPBP1-208ENST00000511439 CCDC102AQ96A19 550 aa8.25□□□□□ -1.09
TOPBP1-208ENST00000511439 GPCPD1Q9NPB8 672 aa8.25□□□□□ -1.09
TOPBP1-208ENST00000511439 GDF9O60383 454 aa8.24□□□□□ -1.09
TOPBP1-208ENST00000511439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.24□□□□□ -1.09
TOPBP1-208ENST00000511439 KRI1Q8N9T8 703 aaKnown RBP8.24□□□□□ -1.09
TOPBP1-208ENST00000511439 ZBTB24O43167 697 aaPredicted RBP8.23□□□□□ -1.09
TOPBP1-208ENST00000511439 TNFRSF10AO00220 468 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms