RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 ERBINQ96RT1 1412 aa4.02□□□□□ -1.77
CLOCK-209ENST00000511124 DUOX2Q9NRD8 1548 aa4.02□□□□□ -1.77
CLOCK-209ENST00000511124 CDK13Q14004 1512 aaKnown RBP4.02□□□□□ -1.77
CLOCK-209ENST00000511124 FAM135BQ49AJ0 1406 aa4.02□□□□□ -1.77
CLOCK-209ENST00000511124 NUP155O75694 1391 aa4.02□□□□□ -1.77
CLOCK-209ENST00000511124 DHX57Q6P158 1386 aaKnown RBP4.02□□□□□ -1.77
CLOCK-209ENST00000511124 DSG3P32926 999 aa4.02□□□□□ -1.77
CLOCK-209ENST00000511124 C1QBPQ07021 282 aaKnown RBP4.02□□□□□ -1.77
CLOCK-209ENST00000511124 CAMSAP1Q5T5Y3 1602 aa4.01□□□□□ -1.77
CLOCK-209ENST00000511124 FGD6Q6ZV73 1430 aa4.01□□□□□ -1.77
CLOCK-209ENST00000511124 TCOF1Q13428 1488 aaKnown RBP4.01□□□□□ -1.77
CLOCK-209ENST00000511124 SUPT6HQ7KZ85 1726 aaKnown RBP4.01□□□□□ -1.77
CLOCK-209ENST00000511124 CDCA8Q53HL2 280 aa4.01□□□□□ -1.77
CLOCK-209ENST00000511124 CDCA7Q9BWT1 371 aaPredicted RBP4.01□□□□□ -1.77
CLOCK-209ENST00000511124 NEFMP07197 916 aa4.01□□□□□ -1.77
CLOCK-209ENST00000511124 ABCC3O15438 1527 aa4.01□□□□□ -1.77
CLOCK-209ENST00000511124 QTRT2Q9H974 415 aaKnown RBP4.01□□□□□ -1.77
CLOCK-209ENST00000511124 TMEM2Q9UHN6 1383 aa4□□□□□ -1.77
CLOCK-209ENST00000511124 CSB-PGBD3P0DP91 1061 aa4□□□□□ -1.77
CLOCK-209ENST00000511124 SLC26A8Q96RN1 970 aa4□□□□□ -1.77
CLOCK-209ENST00000511124 GPATCH8Q9UKJ3 1502 aaKnown RBP4□□□□□ -1.77
CLOCK-209ENST00000511124 C8orf37Q96NL8 207 aa4□□□□□ -1.77
CLOCK-209ENST00000511124 USP21Q9UK80 565 aa4□□□□□ -1.77
CLOCK-209ENST00000511124 ABCC1P33527 1531 aa4□□□□□ -1.77
CLOCK-209ENST00000511124 ANKRD30BQ9BXX2 1392 aa4□□□□□ -1.77
CLOCK-209ENST00000511124 TMEM94Q12767 1356 aa3.99□□□□□ -1.77
CLOCK-209ENST00000511124 POLD1P28340 1107 aa3.99□□□□□ -1.77
CLOCK-209ENST00000511124 ESCO1Q5FWF5 840 aa3.99□□□□□ -1.77
CLOCK-209ENST00000511124 SPINK5Q9NQ38 1064 aaPredicted RBP3.99□□□□□ -1.77
CLOCK-209ENST00000511124 AMOTL2Q9Y2J4 779 aa3.99□□□□□ -1.77
CLOCK-209ENST00000511124 ARHGEF10O15013 1369 aa3.99□□□□□ -1.77
CLOCK-209ENST00000511124 ADGBQ8N7X0 1667 aa3.99□□□□□ -1.77
CLOCK-209ENST00000511124 ANKRD50Q9ULJ7 1429 aa3.99□□□□□ -1.77
CLOCK-209ENST00000511124 NKTRP30414 1462 aaKnown RBP3.99□□□□□ -1.77
CLOCK-209ENST00000511124 CEP170BQ9Y4F5 1589 aaPredicted RBP3.99□□□□□ -1.77
CLOCK-209ENST00000511124 DAXXQ9UER7 740 aaPredicted RBP3.99□□□□□ -1.77
CLOCK-209ENST00000511124 ARHGAP31Q2M1Z3 1444 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 RIMS2Q9UQ26 1411 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 MAP3K1Q13233 1512 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 SYCP2Q9BX26 1530 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 STRCQ7RTU9 1775 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 PAK3O75914 559 aaPredicted RBP3.98□□□□□ -1.77
CLOCK-209ENST00000511124 FBXO31Q5XUX0 539 aaPredicted RBP3.98□□□□□ -1.77
CLOCK-209ENST00000511124 PLEKHG1Q9ULL1 1385 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 RRBP1Q9P2E9 1410 aaKnown RBP3.98□□□□□ -1.77
CLOCK-209ENST00000511124 ADAMTS2O95450 1211 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 RBM33Q96EV2 1170 aaKnown RBP3.98□□□□□ -1.77
CLOCK-209ENST00000511124 PRDM11Q9NQV5 511 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 ROCK1Q13464 1354 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 CAMSAP2Q08AD1 1489 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 MROH2AA6NES4 1674 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 EIF4G2P78344 907 aaKnown RBP eCLIP3.98□□□□□ -1.77
CLOCK-209ENST00000511124 NLRP13Q86W25 1043 aa3.98□□□□□ -1.77
CLOCK-209ENST00000511124 TMX4Q9H1E5 349 aaPredicted RBP3.98□□□□□ -1.77
CLOCK-209ENST00000511124 KDM5CP41229 1560 aa3.97□□□□□ -1.77
CLOCK-209ENST00000511124 HFM1A2PYH4 1435 aa3.97□□□□□ -1.77
CLOCK-209ENST00000511124 EFCAB6Q5THR3 1501 aa3.97□□□□□ -1.77
CLOCK-209ENST00000511124 IDI1Q13907 227 aa3.97□□□□□ -1.77
CLOCK-209ENST00000511124 STK32BQ9NY57 414 aa3.97□□□□□ -1.77
CLOCK-209ENST00000511124 LRP5O75197 1615 aa3.97□□□□□ -1.77
CLOCK-209ENST00000511124 PREX2Q70Z35 1606 aa3.97□□□□□ -1.77
CLOCK-209ENST00000511124 SAMD9LQ8IVG5 1584 aa3.97□□□□□ -1.77
CLOCK-209ENST00000511124 HDGFL2Q7Z4V5 671 aaPredicted RBP3.97□□□□□ -1.77
CLOCK-209ENST00000511124 DCCP43146 1447 aa3.96□□□□□ -1.77
CLOCK-209ENST00000511124 AFF2P51816 1311 aa3.96□□□□□ -1.77
CLOCK-209ENST00000511124 SRPK2P78362 688 aaKnown RBP3.96□□□□□ -1.78
CLOCK-209ENST00000511124 FAM196AQ6ZSG2 479 aa3.96□□□□□ -1.78
CLOCK-209ENST00000511124 DIP2CQ9Y2E4 1556 aa3.96□□□□□ -1.78
CLOCK-209ENST00000511124 CCDC144AA2RUR9 1427 aa3.96□□□□□ -1.78
CLOCK-209ENST00000511124 PTCH1Q13635 1447 aa3.96□□□□□ -1.78
CLOCK-209ENST00000511124 ARHGEF5Q12774 1597 aa3.96□□□□□ -1.78
CLOCK-209ENST00000511124 ZBTB7CA1YPR0 619 aa3.96□□□□□ -1.78
CLOCK-209ENST00000511124 ERVK-7P63135 1459 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 C16orf71Q8IYS4 520 aaPredicted RBP3.95□□□□□ -1.78
CLOCK-209ENST00000511124 PHF8Q9UPP1 1060 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 DAPK1P53355 1430 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 SIRT1Q96EB6 747 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 SPON1Q9HCB6 807 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 SYNMO15061 1565 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 BRD4O60885 1362 aaPredicted RBP3.95□□□□□ -1.78
CLOCK-209ENST00000511124 KCNH5Q8NCM2 988 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 FLAD1Q8NFF5 587 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 STK26Q9P289 416 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 TRPM2O94759 1503 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 MYO3AQ8NEV4 1616 aa3.95□□□□□ -1.78
CLOCK-209ENST00000511124 ZC3H13Q5T200 1668 aaKnown RBP3.94□□□□□ -1.78
CLOCK-209ENST00000511124 KRT28Q7Z3Y7 464 aa3.94□□□□□ -1.78
CLOCK-209ENST00000511124 RICTORQ6R327 1708 aa3.94□□□□□ -1.78
CLOCK-209ENST00000511124 KRT27Q7Z3Y8 459 aa3.94□□□□□ -1.78
CLOCK-209ENST00000511124 ZNF692Q9BU19 519 aaPredicted RBP3.94□□□□□ -1.78
CLOCK-209ENST00000511124 TERF2IPQ9NYB0 399 aa3.94□□□□□ -1.78
CLOCK-209ENST00000511124 MED14O60244 1454 aa3.94□□□□□ -1.78
CLOCK-209ENST00000511124 RGL3Q3MIN7 710 aa3.94□□□□□ -1.78
CLOCK-209ENST00000511124 BCL11BQ9C0K0 894 aaPredicted RBP3.94□□□□□ -1.78
CLOCK-209ENST00000511124 PARD3Q8TEW0 1356 aa3.94□□□□□ -1.78
CLOCK-209ENST00000511124 GRIN3BO60391 1043 aa3.93□□□□□ -1.78
CLOCK-209ENST00000511124 UNC5CLQ8IV45 518 aa3.93□□□□□ -1.78
CLOCK-209ENST00000511124 CHMP4AQ9BY43 222 aa3.93□□□□□ -1.78
CLOCK-209ENST00000511124 NPHP1O15259 732 aa3.93□□□□□ -1.78
CLOCK-209ENST00000511124 ZNF644Q9H582 1327 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms