RNA–Protein interactions for RNA: ENST00000510806.1

SH3RF1-204, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 591 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-204ENST00000510806 ARID4BQ4LE39 1312 aaPredicted RBP10.16□□□□□ -0.78
SH3RF1-204ENST00000510806 MADDQ8WXG6 1647 aa10.16□□□□□ -0.78
SH3RF1-204ENST00000510806 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
SH3RF1-204ENST00000510806 ZFYVE16Q7Z3T8 1539 aa10.16□□□□□ -0.78
SH3RF1-204ENST00000510806 SIGLEC1Q9BZZ2 1709 aa10.16□□□□□ -0.78
SH3RF1-204ENST00000510806 PPP1R37O75864 691 aa10.15□□□□□ -0.78
SH3RF1-204ENST00000510806 ATP1B4Q9UN42 357 aaPredicted RBP10.15□□□□□ -0.78
SH3RF1-204ENST00000510806 LRRIQ1Q96JM4 1722 aa10.15□□□□□ -0.78
SH3RF1-204ENST00000510806 CASKIN1Q8WXD9 1431 aa10.15□□□□□ -0.79
SH3RF1-204ENST00000510806 MYO5CQ9NQX4 1742 aa10.14□□□□□ -0.79
SH3RF1-204ENST00000510806 ATP10AO60312 1499 aa10.14□□□□□ -0.79
SH3RF1-204ENST00000510806 KIF14Q15058 1648 aa10.14□□□□□ -0.79
SH3RF1-204ENST00000510806 LMTK3Q96Q04 1460 aa10.13□□□□□ -0.79
SH3RF1-204ENST00000510806 AFAP1Q8N556 730 aa10.12□□□□□ -0.79
SH3RF1-204ENST00000510806 CLIP1P30622 1438 aa10.12□□□□□ -0.79
SH3RF1-204ENST00000510806 PCF11O94913 1555 aaKnown RBP10.12□□□□□ -0.79
SH3RF1-204ENST00000510806 KDM5CP41229 1560 aa10.12□□□□□ -0.79
SH3RF1-204ENST00000510806 ZNF518AQ6AHZ1 1483 aa10.11□□□□□ -0.79
SH3RF1-204ENST00000510806 ZNF316A6NFI3 1004 aaPredicted RBP10.11□□□□□ -0.79
SH3RF1-204ENST00000510806 CCDC18Q5T9S5 1454 aa10.1□□□□□ -0.79
SH3RF1-204ENST00000510806 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
SH3RF1-204ENST00000510806 C9orf84Q5VXU9 1444 aa10.1□□□□□ -0.79
SH3RF1-204ENST00000510806 RIMS1Q86UR5 1692 aaKnown RBP10.1□□□□□ -0.79
SH3RF1-204ENST00000510806 ARHGEF12Q9NZN5 1544 aa10.1□□□□□ -0.79
SH3RF1-204ENST00000510806 MLH3Q9UHC1 1453 aa10.1□□□□□ -0.79
SH3RF1-204ENST00000510806 ARHGAP5Q13017 1502 aa10.09□□□□□ -0.79
SH3RF1-204ENST00000510806 REREQ9P2R6 1566 aa10.09□□□□□ -0.79
SH3RF1-204ENST00000510806 FYCO1Q9BQS8 1478 aa10.08□□□□□ -0.8
SH3RF1-204ENST00000510806 NUDT7P0C024 238 aa10.07□□□□□ -0.8
SH3RF1-204ENST00000510806 MLECQ14165 292 aa10.07□□□□□ -0.8
SH3RF1-204ENST00000510806 PREX2Q70Z35 1606 aa10.07□□□□□ -0.8
SH3RF1-204ENST00000510806 TRAPPC8Q9Y2L5 1435 aa10.07□□□□□ -0.8
SH3RF1-204ENST00000510806 SLC34A2O95436 690 aa10.06□□□□□ -0.8
SH3RF1-204ENST00000510806 FBXO41Q8TF61 875 aa10.06□□□□□ -0.8
SH3RF1-204ENST00000510806 RNF166Q96A37 237 aaPredicted RBP10.06□□□□□ -0.8
SH3RF1-204ENST00000510806 PCDHGA4Q9Y5G9 962 aa10.06□□□□□ -0.8
SH3RF1-204ENST00000510806 ABCC1P33527 1531 aa10.06□□□□□ -0.8
SH3RF1-204ENST00000510806 AGLP35573 1532 aa10.06□□□□□ -0.8
SH3RF1-204ENST00000510806 FER1L4A9Z1Z3 1794 aa10.06□□□□□ -0.8
SH3RF1-204ENST00000510806 DIP2CQ9Y2E4 1556 aa10.05□□□□□ -0.8
SH3RF1-204ENST00000510806 HSPA2P54652 639 aa10.05□□□□□ -0.8
SH3RF1-204ENST00000510806 HS6ST3Q8IZP7 471 aa10.05□□□□□ -0.8
SH3RF1-204ENST00000510806 GPATCH8Q9UKJ3 1502 aaKnown RBP10.05□□□□□ -0.8
SH3RF1-204ENST00000510806 SETD1BQ9UPS6 1966 aaKnown RBP10.05□□□□□ -0.8
SH3RF1-204ENST00000510806 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
SH3RF1-204ENST00000510806 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
SH3RF1-204ENST00000510806 TMC2Q8TDI7 906 aa10.04□□□□□ -0.8
SH3RF1-204ENST00000510806 CEBPAP49715 358 aaPredicted RBP10.03□□□□□ -0.8
SH3RF1-204ENST00000510806 MYT1LQ9UL68 1186 aa10.03□□□□□ -0.8
SH3RF1-204ENST00000510806 LHX6Q9UPM6 363 aa10.03□□□□□ -0.8
SH3RF1-204ENST00000510806 KIAA1107Q9UPP5 1409 aa10.03□□□□□ -0.8
SH3RF1-204ENST00000510806 KIDINS220Q9ULH0 1771 aa10.03□□□□□ -0.8
SH3RF1-204ENST00000510806 ABCA6Q8N139 1617 aa10.03□□□□□ -0.8
SH3RF1-204ENST00000510806 ITSN2Q9NZM3 1697 aa10.02□□□□□ -0.8
SH3RF1-204ENST00000510806 SAMD9LQ8IVG5 1584 aa10.01□□□□□ -0.81
SH3RF1-204ENST00000510806 LSM11P83369 360 aaKnown RBP eCLIP10□□□□□ -0.81
SH3RF1-204ENST00000510806 PREX1Q8TCU6 1659 aa9.99□□□□□ -0.81
SH3RF1-204ENST00000510806 HNRNPMP52272 730 aaKnown RBP eCLIP9.99□□□□□ -0.81
SH3RF1-204ENST00000510806 ANKRD13DQ6ZTN6 518 aa9.99□□□□□ -0.81
SH3RF1-204ENST00000510806 CFDP1Q9UEE9 299 aaPredicted RBP9.99□□□□□ -0.81
SH3RF1-204ENST00000510806 PLEKHH2Q8IVE3 1493 aa9.98□□□□□ -0.81
SH3RF1-204ENST00000510806 NKX1-1Q15270 411 aaPredicted RBP9.98□□□□□ -0.81
SH3RF1-204ENST00000510806 SPAG9O60271 1321 aaKnown RBP9.98□□□□□ -0.81
SH3RF1-204ENST00000510806 CNTLNQ9NXG0 1405 aa9.98□□□□□ -0.81
SH3RF1-204ENST00000510806 STRCQ7RTU9 1775 aa9.97□□□□□ -0.81
SH3RF1-204ENST00000510806 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
SH3RF1-204ENST00000510806 AXIN2Q9Y2T1 843 aa9.97□□□□□ -0.81
SH3RF1-204ENST00000510806 CCNB3Q8WWL7 1395 aa9.97□□□□□ -0.81
SH3RF1-204ENST00000510806 SYCP2Q9BX26 1530 aa9.97□□□□□ -0.81
SH3RF1-204ENST00000510806 C3P01024 1663 aa9.96□□□□□ -0.81
SH3RF1-204ENST00000510806 CERKQ8TCT0 537 aa9.96□□□□□ -0.82
SH3RF1-204ENST00000510806 MTUS2Q5JR59 1369 aa9.96□□□□□ -0.82
SH3RF1-204ENST00000510806 CEP162Q5TB80 1403 aa9.96□□□□□ -0.82
SH3RF1-204ENST00000510806 UHRF1BP1Q6BDS2 1440 aa9.96□□□□□ -0.82
SH3RF1-204ENST00000510806 MBD5Q9P267 1494 aa9.96□□□□□ -0.82
SH3RF1-204ENST00000510806 CHGAP10645 457 aaKnown RBP9.95□□□□□ -0.82
SH3RF1-204ENST00000510806 PTGER2P43116 358 aa9.95□□□□□ -0.82
SH3RF1-204ENST00000510806 FOXK1P85037 733 aa9.95□□□□□ -0.82
SH3RF1-204ENST00000510806 PTCD2Q8WV60 388 aaKnown RBP9.95□□□□□ -0.82
SH3RF1-204ENST00000510806 ZNF644Q9H582 1327 aaPredicted RBP9.95□□□□□ -0.82
SH3RF1-204ENST00000510806 PLXNC1O60486 1568 aa9.95□□□□□ -0.82
SH3RF1-204ENST00000510806 INO80Q9ULG1 1556 aaPredicted RBP9.95□□□□□ -0.82
SH3RF1-204ENST00000510806 ATP7AQ04656 1500 aa9.94□□□□□ -0.82
SH3RF1-204ENST00000510806 NPATQ14207 1427 aa9.94□□□□□ -0.82
SH3RF1-204ENST00000510806 ZMYM3Q14202 1370 aa9.94□□□□□ -0.82
SH3RF1-204ENST00000510806 PBX2P40425 430 aa9.94□□□□□ -0.82
SH3RF1-204ENST00000510806 ESF1Q9H501 851 aaKnown RBP9.94□□□□□ -0.82
SH3RF1-204ENST00000510806 GPHNQ9NQX3 736 aaPredicted RBP9.94□□□□□ -0.82
SH3RF1-204ENST00000510806 MROH2AA6NES4 1674 aa9.93□□□□□ -0.82
SH3RF1-204ENST00000510806 A2MP01023 1474 aa9.93□□□□□ -0.82
SH3RF1-204ENST00000510806 RTEL1-TNFRSF6BF6WH68 1400 aa9.93□□□□□ -0.82
SH3RF1-204ENST00000510806 PTPRTO14522 1441 aa9.93□□□□□ -0.82
SH3RF1-204ENST00000510806 DSG2Q14126 1118 aa9.93□□□□□ -0.82
SH3RF1-204ENST00000510806 PLPP6Q8IY26 295 aa9.93□□□□□ -0.82
SH3RF1-204ENST00000510806 TIAM1Q13009 1591 aa9.92□□□□□ -0.82
SH3RF1-204ENST00000510806 EHBP1L1Q8N3D4 1523 aa9.92□□□□□ -0.82
SH3RF1-204ENST00000510806 RSPH4AQ5TD94 716 aa9.92□□□□□ -0.82
SH3RF1-204ENST00000510806 RTN4Q9NQC3 1192 aaKnown RBP9.92□□□□□ -0.82
SH3RF1-204ENST00000510806 SUPT6HQ7KZ85 1726 aaKnown RBP9.9□□□□□ -0.82
SH3RF1-204ENST00000510806 DHX29Q7Z478 1369 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms