RNA–Protein interactions for RNA: ENST00000510771.1

GYPA-207, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 3

Gene GYPA, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-207ENST00000510771 FAM161AQ3B820 660 aa14.03□□□□□ -0.16
GYPA-207ENST00000510771 GNPATO15228 680 aa14.02□□□□□ -0.17
GYPA-207ENST00000510771 IRX2Q9BZI1 471 aaPredicted RBP14.02□□□□□ -0.17
GYPA-207ENST00000510771 PXYLP1Q8TE99 480 aa14.01□□□□□ -0.17
GYPA-207ENST00000510771 ZNF516Q92618 1163 aa13.99□□□□□ -0.17
GYPA-207ENST00000510771 COPS2P61201 443 aa13.98□□□□□ -0.17
GYPA-207ENST00000510771 KMT5BQ4FZB7 885 aa13.98□□□□□ -0.17
GYPA-207ENST00000510771 PCDHB3Q9Y5E6 796 aa13.98□□□□□ -0.17
GYPA-207ENST00000510771 GPR37O15354 613 aa13.97□□□□□ -0.17
GYPA-207ENST00000510771 METTL3Q86U44 580 aaKnown RBP13.97□□□□□ -0.17
GYPA-207ENST00000510771 TULP1O00294 542 aaPredicted RBP13.95□□□□□ -0.18
GYPA-207ENST00000510771 GPIHBP1Q8IV16 184 aa13.95□□□□□ -0.18
GYPA-207ENST00000510771 ZPR1O75312 459 aa13.94□□□□□ -0.18
GYPA-207ENST00000510771 RSPH4AQ5TD94 716 aa13.94□□□□□ -0.18
GYPA-207ENST00000510771 PPP1R18Q6NYC8 613 aa13.94□□□□□ -0.18
GYPA-207ENST00000510771 CFHP08603 1231 aa13.93□□□□□ -0.18
GYPA-207ENST00000510771 GGCXP38435 758 aa13.93□□□□□ -0.18
GYPA-207ENST00000510771 ACTN4O43707 911 aaKnown RBP13.92□□□□□ -0.18
GYPA-207ENST00000510771 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.92□□□□□ -0.18
GYPA-207ENST00000510771 FECHP22830 423 aa13.91□□□□□ -0.18
GYPA-207ENST00000510771 BLOC1S3Q6QNY0 202 aa13.9□□□□□ -0.18
GYPA-207ENST00000510771 SLC10A3P09131 477 aa13.89□□□□□ -0.19
GYPA-207ENST00000510771 NKX2-3Q8TAU0 364 aa13.89□□□□□ -0.19
GYPA-207ENST00000510771 TMUB1Q9BVT8 246 aa13.87□□□□□ -0.19
GYPA-207ENST00000510771 PRKD2Q9BZL6 878 aa13.86□□□□□ -0.19
GYPA-207ENST00000510771 DAXXQ9UER7 740 aaPredicted RBP13.86□□□□□ -0.19
GYPA-207ENST00000510771 V9GY48 417 aaPredicted RBP13.86□□□□□ -0.19
GYPA-207ENST00000510771 NR1I2O75469 434 aa13.83□□□□□ -0.2
GYPA-207ENST00000510771 LAPTM4AQ15012 233 aa13.82□□□□□ -0.2
GYPA-207ENST00000510771 SULF1Q8IWU6 871 aa13.8□□□□□ -0.2
GYPA-207ENST00000510771 RDH13Q8NBN7 331 aa13.79□□□□□ -0.2
GYPA-207ENST00000510771 TLL1O43897 1013 aa13.78□□□□□ -0.2
GYPA-207ENST00000510771 DDX11L8A8MPP1 907 aa13.77□□□□□ -0.21
GYPA-207ENST00000510771 MAP2K5Q13163 448 aa13.77□□□□□ -0.21
GYPA-207ENST00000510771 ADH1BP00325 375 aa13.75□□□□□ -0.21
GYPA-207ENST00000510771 PHOX2BQ99453 314 aa13.75□□□□□ -0.21
GYPA-207ENST00000510771 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
GYPA-207ENST00000510771 RNF223E7ERA6 249 aa13.73□□□□□ -0.21
GYPA-207ENST00000510771 Q6ZNB5 142 aa13.73□□□□□ -0.21
GYPA-207ENST00000510771 SCUBE3Q8IX30 993 aa13.72□□□□□ -0.21
GYPA-207ENST00000510771 ANKLE1Q8NAG6 615 aa13.72□□□□□ -0.21
GYPA-207ENST00000510771 GFRA3O60609 400 aa13.71□□□□□ -0.21
GYPA-207ENST00000510771 MINK1Q8N4C8 1332 aaPredicted RBP13.7□□□□□ -0.22
GYPA-207ENST00000510771 S1PR4O95977 384 aa13.7□□□□□ -0.22
GYPA-207ENST00000510771 PUS10Q3MIT2 529 aaKnown RBP13.7□□□□□ -0.22
GYPA-207ENST00000510771 GCGRP47871 477 aa13.69□□□□□ -0.22
GYPA-207ENST00000510771 IRF6O14896 467 aa13.68□□□□□ -0.22
GYPA-207ENST00000510771 ATP6V1AP38606 617 aa13.68□□□□□ -0.22
GYPA-207ENST00000510771 FUT2Q10981 343 aa13.68□□□□□ -0.22
GYPA-207ENST00000510771 SLC6A16Q9GZN6 736 aa13.68□□□□□ -0.22
GYPA-207ENST00000510771 NRG2O14511 850 aaPredicted RBP13.67□□□□□ -0.22
GYPA-207ENST00000510771 MORN1Q5T089 497 aa13.67□□□□□ -0.22
GYPA-207ENST00000510771 SPSB2Q99619 263 aa13.67□□□□□ -0.22
GYPA-207ENST00000510771 SLC19A1P41440 591 aa13.65□□□□□ -0.22
GYPA-207ENST00000510771 GRIPAP1Q4V328 841 aa13.64□□□□□ -0.23
GYPA-207ENST00000510771 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.63□□□□□ -0.23
GYPA-207ENST00000510771 PDZRN3Q9UPQ7 1066 aa13.62□□□□□ -0.23
GYPA-207ENST00000510771 PPEF1O14829 653 aaPredicted RBP13.61□□□□□ -0.23
GYPA-207ENST00000510771 CCDC102AQ96A19 550 aa13.61□□□□□ -0.23
GYPA-207ENST00000510771 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
GYPA-207ENST00000510771 FMNL1O95466 1100 aaPredicted RBP13.6□□□□□ -0.23
GYPA-207ENST00000510771 CD46P15529 392 aa13.6□□□□□ -0.23
GYPA-207ENST00000510771 MDM2Q00987 491 aaPredicted RBP13.59□□□□□ -0.23
GYPA-207ENST00000510771 THAP11Q96EK4 314 aa13.59□□□□□ -0.23
GYPA-207ENST00000510771 SLC27A5Q9Y2P5 690 aa13.59□□□□□ -0.23
GYPA-207ENST00000510771 SPRYD7Q5W111 196 aa13.58□□□□□ -0.24
GYPA-207ENST00000510771 LMOD2Q6P5Q4 547 aa13.58□□□□□ -0.24
GYPA-207ENST00000510771 EMID1Q96A84 441 aaPredicted RBP13.58□□□□□ -0.24
GYPA-207ENST00000510771 ZNF598Q86UK7 904 aaKnown RBP13.57□□□□□ -0.24
GYPA-207ENST00000510771 CLCN1P35523 988 aa13.55□□□□□ -0.24
GYPA-207ENST00000510771 TRAF7Q6Q0C0 670 aa13.55□□□□□ -0.24
GYPA-207ENST00000510771 USP46P62068 366 aa13.54□□□□□ -0.24
GYPA-207ENST00000510771 Q3C1V9 767 aa13.54□□□□□ -0.24
GYPA-207ENST00000510771 LIAT1Q6ZQX7 453 aa13.54□□□□□ -0.24
GYPA-207ENST00000510771 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
GYPA-207ENST00000510771 KDM4AO75164 1064 aa13.53□□□□□ -0.24
GYPA-207ENST00000510771 BRICD5Q6PL45 260 aa13.53□□□□□ -0.24
GYPA-207ENST00000510771 ZNF697Q5TEC3 545 aa13.52□□□□□ -0.25
GYPA-207ENST00000510771 KRI1Q8N9T8 703 aaKnown RBP13.52□□□□□ -0.25
GYPA-207ENST00000510771 PRR20EP86478 221 aa13.51□□□□□ -0.25
GYPA-207ENST00000510771 PRR20CP86479 221 aa13.51□□□□□ -0.25
GYPA-207ENST00000510771 PRR20DP86480 221 aa13.51□□□□□ -0.25
GYPA-207ENST00000510771 PRR20BP86481 221 aa13.51□□□□□ -0.25
GYPA-207ENST00000510771 PRR20AP86496 221 aa13.51□□□□□ -0.25
GYPA-207ENST00000510771 MSS51Q4VC12 460 aa13.51□□□□□ -0.25
GYPA-207ENST00000510771 PLA2G2CQ5R387 149 aa13.5□□□□□ -0.25
GYPA-207ENST00000510771 TRIM67Q6ZTA4 783 aa13.5□□□□□ -0.25
GYPA-207ENST00000510771 FAM160A2Q8N612 972 aaPredicted RBP13.5□□□□□ -0.25
GYPA-207ENST00000510771 FCF1Q9Y324 198 aaKnown RBP13.49□□□□□ -0.25
GYPA-207ENST00000510771 FAM217BQ9NTX9 383 aaPredicted RBP13.48□□□□□ -0.25
GYPA-207ENST00000510771 RPIAP49247 311 aa13.47□□□□□ -0.25
GYPA-207ENST00000510771 RNF19BQ6ZMZ0 732 aa13.47□□□□□ -0.25
GYPA-207ENST00000510771 BARGINQ6ZT62 677 aa13.47□□□□□ -0.25
GYPA-207ENST00000510771 LCE2BO14633 110 aa13.46□□□□□ -0.25
GYPA-207ENST00000510771 ZMYND10O75800 440 aa13.44□□□□□ -0.26
GYPA-207ENST00000510771 PRDM9Q9NQV7 894 aa13.44□□□□□ -0.26
GYPA-207ENST00000510771 HOXA2O43364 376 aa13.43□□□□□ -0.26
GYPA-207ENST00000510771 GDF9O60383 454 aa13.42□□□□□ -0.26
GYPA-207ENST00000510771 CD2BP2O95400 341 aaKnown RBP13.42□□□□□ -0.26
GYPA-207ENST00000510771 ZC3H15Q8WU90 426 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms