RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 SLFN5Q08AF3 891 aa18.83■□□□□ 0.6
USP38-202ENST00000510377 TCP11L2Q8N4U5 519 aa18.81■□□□□ 0.6
USP38-202ENST00000510377 PZPP20742 1482 aa18.8■□□□□ 0.6
USP38-202ENST00000510377 AFAP1Q8N556 730 aa18.8■□□□□ 0.6
USP38-202ENST00000510377 PDZRN3Q9UPQ7 1066 aa18.8■□□□□ 0.6
USP38-202ENST00000510377 ELL2O00472 640 aaPredicted RBP18.8■□□□□ 0.6
USP38-202ENST00000510377 KIAA0586Q9BVV6 1533 aa18.79■□□□□ 0.6
USP38-202ENST00000510377 GPATCH8Q9UKJ3 1502 aaKnown RBP18.78■□□□□ 0.6
USP38-202ENST00000510377 ZKSCAN2Q63HK3 967 aa18.78■□□□□ 0.6
USP38-202ENST00000510377 LRPPRCP42704 1394 aaKnown RBP18.77■□□□□ 0.6
USP38-202ENST00000510377 IGHDP01880 384 aa18.77■□□□□ 0.6
USP38-202ENST00000510377 PER1O15534 1290 aaPredicted RBP18.77■□□□□ 0.6
USP38-202ENST00000510377 TMEM132EQ6IEE7 984 aa18.77■□□□□ 0.6
USP38-202ENST00000510377 NUP153P49790 1475 aaKnown RBP18.76■□□□□ 0.59
USP38-202ENST00000510377 PARD3Q8TEW0 1356 aa18.76■□□□□ 0.59
USP38-202ENST00000510377 MTHFSP49914 203 aa18.76■□□□□ 0.59
USP38-202ENST00000510377 C14orf37Q86TY3 774 aa18.76■□□□□ 0.59
USP38-202ENST00000510377 RALGAPBQ86X10 1494 aa18.76■□□□□ 0.59
USP38-202ENST00000510377 RSPH6AQ9H0K4 717 aa18.76■□□□□ 0.59
USP38-202ENST00000510377 ZBTB7CA1YPR0 619 aa18.75■□□□□ 0.59
USP38-202ENST00000510377 SLC12A5Q9H2X9 1139 aa18.75■□□□□ 0.59
USP38-202ENST00000510377 DZIP1LQ8IYY4 767 aaKnown RBP18.75■□□□□ 0.59
USP38-202ENST00000510377 RUNDC1Q96C34 613 aa18.75■□□□□ 0.59
USP38-202ENST00000510377 C8orf34Q49A92 452 aa18.74■□□□□ 0.59
USP38-202ENST00000510377 DENND4BO75064 1496 aaPredicted RBP18.74■□□□□ 0.59
USP38-202ENST00000510377 C22orf23Q9BZE7 217 aa18.74■□□□□ 0.59
USP38-202ENST00000510377 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
USP38-202ENST00000510377 TSR2Q969E8 191 aaKnown RBP18.73■□□□□ 0.59
USP38-202ENST00000510377 IPO8O15397 1037 aaKnown RBP18.73■□□□□ 0.59
USP38-202ENST00000510377 PDE3AQ14432 1141 aa18.72■□□□□ 0.59
USP38-202ENST00000510377 GBP4Q96PP9 640 aa18.72■□□□□ 0.59
USP38-202ENST00000510377 TESK2Q96S53 571 aa18.72■□□□□ 0.59
USP38-202ENST00000510377 PLEKHH1Q9ULM0 1364 aa18.72■□□□□ 0.59
USP38-202ENST00000510377 KDM5BQ9UGL1 1544 aa18.71■□□□□ 0.59
USP38-202ENST00000510377 ANKRD45Q5TZF3 282 aa18.71■□□□□ 0.59
USP38-202ENST00000510377 ARHGAP5Q13017 1502 aa18.71■□□□□ 0.59
USP38-202ENST00000510377 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
USP38-202ENST00000510377 ARID3AQ99856 593 aa18.71■□□□□ 0.59
USP38-202ENST00000510377 SPINK5Q9NQ38 1064 aaPredicted RBP18.71■□□□□ 0.59
USP38-202ENST00000510377 SOX12O15370 315 aa18.7■□□□□ 0.58
USP38-202ENST00000510377 CHMP5Q9NZZ3 219 aa18.7■□□□□ 0.58
USP38-202ENST00000510377 WDR62O43379 1518 aa18.69■□□□□ 0.58
USP38-202ENST00000510377 SAMD9Q5K651 1589 aa18.68■□□□□ 0.58
USP38-202ENST00000510377 MAGI1Q96QZ7 1491 aaPredicted RBP18.68■□□□□ 0.58
USP38-202ENST00000510377 PTMAP06454 111 aaKnown RBP18.68■□□□□ 0.58
USP38-202ENST00000510377 SEC24BO95487 1268 aa18.67■□□□□ 0.58
USP38-202ENST00000510377 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.67■□□□□ 0.58
USP38-202ENST00000510377 GGNBP2Q9H3C7 697 aa18.67■□□□□ 0.58
USP38-202ENST00000510377 TRAK2O60296 914 aa18.66■□□□□ 0.58
USP38-202ENST00000510377 FOXD4L5Q5VV16 416 aaPredicted RBP18.66■□□□□ 0.58
USP38-202ENST00000510377 FOXD4L4Q8WXT5 416 aaPredicted RBP18.66■□□□□ 0.58
USP38-202ENST00000510377 EXOSC9Q06265 439 aaKnown RBP18.66■□□□□ 0.58
USP38-202ENST00000510377 TNNQ9UQP3 1299 aa18.66■□□□□ 0.58
USP38-202ENST00000510377 AMER1Q5JTC6 1135 aaPredicted RBP18.65■□□□□ 0.58
USP38-202ENST00000510377 GCC2Q8IWJ2 1684 aa18.65■□□□□ 0.58
USP38-202ENST00000510377 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
USP38-202ENST00000510377 PRAG1Q86YV5 1406 aa18.64■□□□□ 0.57
USP38-202ENST00000510377 MSNP26038 577 aaKnown RBP18.64■□□□□ 0.57
USP38-202ENST00000510377 RIPK4P57078 832 aa18.64■□□□□ 0.57
USP38-202ENST00000510377 FAM43AQ8N2R8 423 aa18.64■□□□□ 0.57
USP38-202ENST00000510377 CABP2Q9NPB3 220 aa18.64■□□□□ 0.57
USP38-202ENST00000510377 DDX11L8A8MPP1 907 aa18.63■□□□□ 0.57
USP38-202ENST00000510377 NGEFQ8N5V2 710 aa18.63■□□□□ 0.57
USP38-202ENST00000510377 DDX19BQ9UMR2 479 aa18.63■□□□□ 0.57
USP38-202ENST00000510377 GRIN2AQ12879 1464 aa18.63■□□□□ 0.57
USP38-202ENST00000510377 DNMT1P26358 1616 aaKnown RBP18.63■□□□□ 0.57
USP38-202ENST00000510377 CASC1Q6TDU7 716 aa18.63■□□□□ 0.57
USP38-202ENST00000510377 PLEKHH2Q8IVE3 1493 aa18.62■□□□□ 0.57
USP38-202ENST00000510377 MINK1Q8N4C8 1332 aaPredicted RBP18.62■□□□□ 0.57
USP38-202ENST00000510377 PLCB2Q00722 1185 aa18.62■□□□□ 0.57
USP38-202ENST00000510377 DNTTIP2Q5QJE6 756 aaKnown RBP18.62■□□□□ 0.57
USP38-202ENST00000510377 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
USP38-202ENST00000510377 RARSP54136 660 aaKnown RBP18.62■□□□□ 0.57
USP38-202ENST00000510377 CCDC141Q6ZP82 1450 aa18.61■□□□□ 0.57
USP38-202ENST00000510377 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
USP38-202ENST00000510377 NKTRP30414 1462 aaKnown RBP18.61■□□□□ 0.57
USP38-202ENST00000510377 NOL8Q76FK4 1167 aaKnown RBP18.61■□□□□ 0.57
USP38-202ENST00000510377 DDX49Q9Y6V7 483 aaKnown RBP18.61■□□□□ 0.57
USP38-202ENST00000510377 C1orf115Q9H7X2 142 aa18.6■□□□□ 0.57
USP38-202ENST00000510377 HSP90AA2PQ14568 343 aaPredicted RBP18.6■□□□□ 0.57
USP38-202ENST00000510377 HDGFL2Q7Z4V5 671 aaPredicted RBP18.6■□□□□ 0.57
USP38-202ENST00000510377 PCDHB15Q9Y5E8 787 aa18.6■□□□□ 0.57
USP38-202ENST00000510377 KDM2BQ8NHM5 1336 aa18.6■□□□□ 0.57
USP38-202ENST00000510377 MCM4P33991 863 aa18.59■□□□□ 0.57
USP38-202ENST00000510377 RAPGEF6Q8TEU7 1601 aa18.59■□□□□ 0.57
USP38-202ENST00000510377 VSIG10Q8N0Z9 540 aa18.59■□□□□ 0.57
USP38-202ENST00000510377 CHMP4BQ9H444 224 aaKnown RBP18.59■□□□□ 0.57
USP38-202ENST00000510377 UHRF1BP1Q6BDS2 1440 aa18.57■□□□□ 0.56
USP38-202ENST00000510377 MVPQ14764 893 aaKnown RBP18.57■□□□□ 0.56
USP38-202ENST00000510377 NOB1Q9ULX3 412 aaKnown RBP18.57■□□□□ 0.56
USP38-202ENST00000510377 EVC2Q86UK5 1308 aa18.57■□□□□ 0.56
USP38-202ENST00000510377 FOXD4L6Q3SYB3 417 aaPredicted RBP18.56■□□□□ 0.56
USP38-202ENST00000510377 FOXD4L3Q6VB84 417 aaPredicted RBP18.56■□□□□ 0.56
USP38-202ENST00000510377 TERF2IPQ9NYB0 399 aa18.56■□□□□ 0.56
USP38-202ENST00000510377 HMOX1P09601 288 aa18.56■□□□□ 0.56
USP38-202ENST00000510377 CALD1Q05682 793 aaKnown RBP18.55■□□□□ 0.56
USP38-202ENST00000510377 RLBP1P12271 317 aa18.55■□□□□ 0.56
USP38-202ENST00000510377 ADGRF5Q8IZF2 1346 aa18.55■□□□□ 0.56
USP38-202ENST00000510377 KIF14Q15058 1648 aa18.54■□□□□ 0.56
USP38-202ENST00000510377 BCORL1Q5H9F3 1711 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms