RNA–Protein interactions for RNA: ENST00000509823.1

CENPE-205, Transcript of centromere protein E, humanhuman

TSL 3

Gene CENPE, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-205ENST00000509823 GPIHBP1Q8IV16 184 aa13.17□□□□□ -0.3
CENPE-205ENST00000509823 ZNF516Q92618 1163 aa13.17□□□□□ -0.3
CENPE-205ENST00000509823 PHOX2BQ99453 314 aa13.16□□□□□ -0.3
CENPE-205ENST00000509823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
CENPE-205ENST00000509823 SLC10A3P09131 477 aa13.15□□□□□ -0.3
CENPE-205ENST00000509823 NLRP7Q8WX94 980 aa13.13□□□□□ -0.31
CENPE-205ENST00000509823 IL21Q9HBE4 155 aa13.12□□□□□ -0.31
CENPE-205ENST00000509823 RGS20O76081 388 aa13.1□□□□□ -0.31
CENPE-205ENST00000509823 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
CENPE-205ENST00000509823 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.09□□□□□ -0.31
CENPE-205ENST00000509823 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
CENPE-205ENST00000509823 COPS2P61201 443 aa13.08□□□□□ -0.32
CENPE-205ENST00000509823 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
CENPE-205ENST00000509823 ACTN4O43707 911 aaKnown RBP13.05□□□□□ -0.32
CENPE-205ENST00000509823 CFHP08603 1231 aa13.05□□□□□ -0.32
CENPE-205ENST00000509823 BLOC1S3Q6QNY0 202 aa13.04□□□□□ -0.32
CENPE-205ENST00000509823 DAXXQ9UER7 740 aaPredicted RBP13.03□□□□□ -0.32
CENPE-205ENST00000509823 PCDHB3Q9Y5E6 796 aa13.03□□□□□ -0.32
CENPE-205ENST00000509823 ZPR1O75312 459 aa13.02□□□□□ -0.33
CENPE-205ENST00000509823 IRF6O14896 467 aa13.01□□□□□ -0.33
CENPE-205ENST00000509823 MAP2K5Q13163 448 aa13.01□□□□□ -0.33
CENPE-205ENST00000509823 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
CENPE-205ENST00000509823 PRR14Q9BWN1 585 aa13.01□□□□□ -0.33
CENPE-205ENST00000509823 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
CENPE-205ENST00000509823 KMT5BQ4FZB7 885 aa12.98□□□□□ -0.33
CENPE-205ENST00000509823 LMOD2Q6P5Q4 547 aa12.97□□□□□ -0.33
CENPE-205ENST00000509823 MINK1Q8N4C8 1332 aaPredicted RBP12.95□□□□□ -0.34
CENPE-205ENST00000509823 DDX11L8A8MPP1 907 aa12.95□□□□□ -0.34
CENPE-205ENST00000509823 TLL1O43897 1013 aa12.95□□□□□ -0.34
CENPE-205ENST00000509823 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.95□□□□□ -0.34
CENPE-205ENST00000509823 PUS10Q3MIT2 529 aaKnown RBP12.93□□□□□ -0.34
CENPE-205ENST00000509823 RDH13Q8NBN7 331 aa12.92□□□□□ -0.34
CENPE-205ENST00000509823 CCDC102AQ96A19 550 aa12.92□□□□□ -0.34
CENPE-205ENST00000509823 GCGRP47871 477 aa12.91□□□□□ -0.34
CENPE-205ENST00000509823 RSPH4AQ5TD94 716 aa12.9□□□□□ -0.34
CENPE-205ENST00000509823 SCUBE3Q8IX30 993 aa12.9□□□□□ -0.34
CENPE-205ENST00000509823 FUT2Q10981 343 aa12.89□□□□□ -0.35
CENPE-205ENST00000509823 ZMYND10O75800 440 aa12.87□□□□□ -0.35
CENPE-205ENST00000509823 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
CENPE-205ENST00000509823 MORN1Q5T089 497 aa12.87□□□□□ -0.35
CENPE-205ENST00000509823 ZC3H15Q8WU90 426 aaKnown RBP12.87□□□□□ -0.35
CENPE-205ENST00000509823 EMID1Q96A84 441 aaPredicted RBP12.87□□□□□ -0.35
CENPE-205ENST00000509823 PRKD2Q9BZL6 878 aa12.87□□□□□ -0.35
CENPE-205ENST00000509823 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
CENPE-205ENST00000509823 NR1I2O75469 434 aa12.86□□□□□ -0.35
CENPE-205ENST00000509823 BARGINQ6ZT62 677 aa12.86□□□□□ -0.35
CENPE-205ENST00000509823 SULF1Q8IWU6 871 aa12.86□□□□□ -0.35
CENPE-205ENST00000509823 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
CENPE-205ENST00000509823 CD46P15529 392 aa12.85□□□□□ -0.35
CENPE-205ENST00000509823 IRX2Q9BZI1 471 aaPredicted RBP12.85□□□□□ -0.35
CENPE-205ENST00000509823 PPEF1O14829 653 aaPredicted RBP12.83□□□□□ -0.36
CENPE-205ENST00000509823 S1PR4O95977 384 aa12.83□□□□□ -0.36
CENPE-205ENST00000509823 THAP11Q96EK4 314 aa12.83□□□□□ -0.36
CENPE-205ENST00000509823 REPIN1Q9BWE0 567 aaKnown RBP12.83□□□□□ -0.36
CENPE-205ENST00000509823 ADH1BP00325 375 aa12.82□□□□□ -0.36
CENPE-205ENST00000509823 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
CENPE-205ENST00000509823 SLC27A5Q9Y2P5 690 aa12.82□□□□□ -0.36
CENPE-205ENST00000509823 GGCXP38435 758 aa12.8□□□□□ -0.36
CENPE-205ENST00000509823 V9GY48 417 aaPredicted RBP12.8□□□□□ -0.36
CENPE-205ENST00000509823 SPSB2Q99619 263 aa12.78□□□□□ -0.36
CENPE-205ENST00000509823 FAM217BQ9NTX9 383 aaPredicted RBP12.78□□□□□ -0.36
CENPE-205ENST00000509823 FAM160A2Q8N612 972 aaPredicted RBP12.77□□□□□ -0.37
CENPE-205ENST00000509823 KRI1Q8N9T8 703 aaKnown RBP12.77□□□□□ -0.37
CENPE-205ENST00000509823 GPCPD1Q9NPB8 672 aa12.77□□□□□ -0.37
CENPE-205ENST00000509823 SLC6A16Q9GZN6 736 aa12.76□□□□□ -0.37
CENPE-205ENST00000509823 CLCN1P35523 988 aa12.75□□□□□ -0.37
CENPE-205ENST00000509823 BRICD5Q6PL45 260 aa12.75□□□□□ -0.37
CENPE-205ENST00000509823 ANKLE1Q8NAG6 615 aa12.75□□□□□ -0.37
CENPE-205ENST00000509823 PLA2G2CQ5R387 149 aa12.74□□□□□ -0.37
CENPE-205ENST00000509823 LIAT1Q6ZQX7 453 aa12.74□□□□□ -0.37
CENPE-205ENST00000509823 HLA-CQ95604 372 aa12.74□□□□□ -0.37
CENPE-205ENST00000509823 KDM4AO75164 1064 aa12.73□□□□□ -0.37
CENPE-205ENST00000509823 RNF19BQ6ZMZ0 732 aa12.73□□□□□ -0.37
CENPE-205ENST00000509823 SALL2Q9Y467 1007 aaPredicted RBP12.73□□□□□ -0.37
CENPE-205ENST00000509823 SLC19A1P41440 591 aa12.71□□□□□ -0.37
CENPE-205ENST00000509823 FMNL1O95466 1100 aaPredicted RBP12.7□□□□□ -0.38
CENPE-205ENST00000509823 AMHR2Q16671 573 aa12.7□□□□□ -0.38
CENPE-205ENST00000509823 GFRA3O60609 400 aa12.69□□□□□ -0.38
CENPE-205ENST00000509823 TRIM67Q6ZTA4 783 aa12.69□□□□□ -0.38
CENPE-205ENST00000509823 PRDM9Q9NQV7 894 aa12.69□□□□□ -0.38
CENPE-205ENST00000509823 LCE2BO14633 110 aa12.68□□□□□ -0.38
CENPE-205ENST00000509823 SSTR3P32745 418 aaPredicted RBP12.67□□□□□ -0.38
CENPE-205ENST00000509823 SPRYD7Q5W111 196 aa12.67□□□□□ -0.38
CENPE-205ENST00000509823 HOXA2O43364 376 aa12.66□□□□□ -0.38
CENPE-205ENST00000509823 GRIPAP1Q4V328 841 aa12.66□□□□□ -0.38
CENPE-205ENST00000509823 TRIM66O15016 1216 aa12.65□□□□□ -0.38
CENPE-205ENST00000509823 GUCA2AQ02747 115 aa12.65□□□□□ -0.38
CENPE-205ENST00000509823 USP46P62068 366 aa12.64□□□□□ -0.39
CENPE-205ENST00000509823 MSS51Q4VC12 460 aa12.63□□□□□ -0.39
CENPE-205ENST00000509823 LAPTM4AQ15012 233 aa12.62□□□□□ -0.39
CENPE-205ENST00000509823 GIGYF2Q6Y7W6 1299 aaKnown RBP12.62□□□□□ -0.39
CENPE-205ENST00000509823 Q6ZNB5 142 aa12.62□□□□□ -0.39
CENPE-205ENST00000509823 ZNF598Q86UK7 904 aaKnown RBP12.62□□□□□ -0.39
CENPE-205ENST00000509823 NRG2O14511 850 aaPredicted RBP12.61□□□□□ -0.39
CENPE-205ENST00000509823 TTLL12Q14166 644 aaPredicted RBP12.61□□□□□ -0.39
CENPE-205ENST00000509823 PARP9Q8IXQ6 854 aa12.61□□□□□ -0.39
CENPE-205ENST00000509823 PDZRN3Q9UPQ7 1066 aa12.61□□□□□ -0.39
CENPE-205ENST00000509823 FCF1Q9Y324 198 aaKnown RBP12.61□□□□□ -0.39
CENPE-205ENST00000509823 Q3C1V9 767 aa12.6□□□□□ -0.39
CENPE-205ENST00000509823 SPIRE2Q8WWL2 714 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms