RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 RBM6P78332 1123 aaKnown RBP22.08■■□□□ 1.13
HMGCR-208ENST00000509431 NUTM2BA6NNL0 878 aaPredicted RBP22.07■■□□□ 1.12
HMGCR-208ENST00000509431 NUTM2EB1AL46 878 aaPredicted RBP22.07■■□□□ 1.12
HMGCR-208ENST00000509431 NUTM2DQ5VT03 806 aaPredicted RBP22.07■■□□□ 1.12
HMGCR-208ENST00000509431 NUTM2AQ8IVF1 878 aaPredicted RBP22.07■■□□□ 1.12
HMGCR-208ENST00000509431 ATAD2Q6PL18 1390 aa22.06■■□□□ 1.12
HMGCR-208ENST00000509431 CHD2O14647 1828 aaKnown RBP22.06■■□□□ 1.12
HMGCR-208ENST00000509431 CADPS2Q86UW7 1296 aa22.04■■□□□ 1.12
HMGCR-208ENST00000509431 DIP2AQ14689 1571 aa22.04■■□□□ 1.12
HMGCR-208ENST00000509431 QTRT2Q9H974 415 aaKnown RBP22.03■■□□□ 1.12
HMGCR-208ENST00000509431 SETBP1Q9Y6X0 1596 aa22.01■■□□□ 1.11
HMGCR-208ENST00000509431 IDI1Q13907 227 aa22■■□□□ 1.11
HMGCR-208ENST00000509431 BCANQ96GW7 911 aa22■■□□□ 1.11
HMGCR-208ENST00000509431 NGLY1Q96IV0 654 aa22■■□□□ 1.11
HMGCR-208ENST00000509431 DUOX2Q9NRD8 1548 aa22■■□□□ 1.11
HMGCR-208ENST00000509431 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.98■■□□□ 1.11
HMGCR-208ENST00000509431 ATF3P18847 181 aa21.98■■□□□ 1.11
HMGCR-208ENST00000509431 C14orf37Q86TY3 774 aa21.98■■□□□ 1.11
HMGCR-208ENST00000509431 C19orf44Q9H6X5 657 aa21.97■■□□□ 1.11
HMGCR-208ENST00000509431 ADGRB3O60242 1522 aa21.96■■□□□ 1.11
HMGCR-208ENST00000509431 SETD5Q9C0A6 1442 aa21.96■■□□□ 1.11
HMGCR-208ENST00000509431 CCDC125Q86Z20 511 aa21.94■■□□□ 1.1
HMGCR-208ENST00000509431 C8orf37Q96NL8 207 aa21.94■■□□□ 1.1
HMGCR-208ENST00000509431 PLEKHG1Q9ULL1 1385 aa21.94■■□□□ 1.1
HMGCR-208ENST00000509431 BRINP3Q76B58 766 aa21.93■■□□□ 1.1
HMGCR-208ENST00000509431 KANK1Q14678 1352 aa21.92■■□□□ 1.1
HMGCR-208ENST00000509431 ERBINQ96RT1 1412 aa21.9■■□□□ 1.1
HMGCR-208ENST00000509431 HDGFP51858 240 aaKnown RBP21.9■■□□□ 1.1
HMGCR-208ENST00000509431 LRRC59Q96AG4 307 aaKnown RBP21.9■■□□□ 1.1
HMGCR-208ENST00000509431 TBX22Q9Y458 520 aa21.9■■□□□ 1.1
HMGCR-208ENST00000509431 SLC52A1Q9NWF4 448 aa21.89■■□□□ 1.09
HMGCR-208ENST00000509431 LMTK2Q8IWU2 1503 aa21.87■■□□□ 1.09
HMGCR-208ENST00000509431 ZFYVE9O95405 1425 aa21.87■■□□□ 1.09
HMGCR-208ENST00000509431 NOS1P29475 1434 aa21.87■■□□□ 1.09
HMGCR-208ENST00000509431 DCCP43146 1447 aa21.87■■□□□ 1.09
HMGCR-208ENST00000509431 NHSL1Q5SYE7 1610 aa21.87■■□□□ 1.09
HMGCR-208ENST00000509431 ASXL1Q8IXJ9 1541 aa21.86■■□□□ 1.09
HMGCR-208ENST00000509431 PPP1R15AO75807 674 aaPredicted RBP21.85■■□□□ 1.09
HMGCR-208ENST00000509431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.85■■□□□ 1.09
HMGCR-208ENST00000509431 PIK3R4Q99570 1358 aa21.85■■□□□ 1.09
HMGCR-208ENST00000509431 KIF15Q9NS87 1388 aa21.85■■□□□ 1.09
HMGCR-208ENST00000509431 LRP5O75197 1615 aa21.84■■□□□ 1.09
HMGCR-208ENST00000509431 PNPLA6Q8IY17 1366 aa21.83■■□□□ 1.08
HMGCR-208ENST00000509431 TRPC5Q9UL62 973 aaPredicted RBP21.82■■□□□ 1.08
HMGCR-208ENST00000509431 RIMS2Q9UQ26 1411 aa21.81■■□□□ 1.08
HMGCR-208ENST00000509431 MYOM3Q5VTT5 1437 aa21.8■■□□□ 1.08
HMGCR-208ENST00000509431 MYO5BQ9ULV0 1848 aa21.78■■□□□ 1.08
HMGCR-208ENST00000509431 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.78■■□□□ 1.08
HMGCR-208ENST00000509431 USP21Q9UK80 565 aa21.78■■□□□ 1.08
HMGCR-208ENST00000509431 ADAMTS13Q76LX8 1427 aa21.76■■□□□ 1.07
HMGCR-208ENST00000509431 MST1RQ04912 1400 aa21.75■■□□□ 1.07
HMGCR-208ENST00000509431 ADAMTS2O95450 1211 aa21.75■■□□□ 1.07
HMGCR-208ENST00000509431 EP400Q96L91 3159 aa21.75■■□□□ 1.07
HMGCR-208ENST00000509431 ATRNO75882 1429 aa21.74■■□□□ 1.07
HMGCR-208ENST00000509431 RRP7BPQ9NSQ0 103 aa21.74■■□□□ 1.07
HMGCR-208ENST00000509431 GCC2Q8IWJ2 1684 aa21.73■■□□□ 1.07
HMGCR-208ENST00000509431 FNBP4Q8N3X1 1017 aaPredicted RBP21.73■■□□□ 1.07
HMGCR-208ENST00000509431 TRPM2O94759 1503 aa21.73■■□□□ 1.07
HMGCR-208ENST00000509431 RPRD2Q5VT52 1461 aaKnown RBP21.72■■□□□ 1.07
HMGCR-208ENST00000509431 TMEM131LA2VDJ0 1609 aa21.72■■□□□ 1.07
HMGCR-208ENST00000509431 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
HMGCR-208ENST00000509431 CROCC2H7BZ55 1655 aa21.71■■□□□ 1.07
HMGCR-208ENST00000509431 BLMP54132 1417 aaPredicted RBP21.71■■□□□ 1.07
HMGCR-208ENST00000509431 AMOTL2Q9Y2J4 779 aa21.7■■□□□ 1.06
HMGCR-208ENST00000509431 ABCC5O15440 1437 aa21.64■■□□□ 1.06
HMGCR-208ENST00000509431 PTPRUQ92729 1446 aa21.64■■□□□ 1.06
HMGCR-208ENST00000509431 DDX17Q92841 729 aaKnown RBP21.64■■□□□ 1.05
HMGCR-208ENST00000509431 LAMC1P11047 1609 aa21.63■■□□□ 1.05
HMGCR-208ENST00000509431 XRN1Q8IZH2 1706 aaKnown RBP21.63■■□□□ 1.05
HMGCR-208ENST00000509431 SF3B2Q13435 895 aaKnown RBP21.62■■□□□ 1.05
HMGCR-208ENST00000509431 ANKRD30AQ9BXX3 1397 aa21.6■■□□□ 1.05
HMGCR-208ENST00000509431 UNC13BO14795 1591 aa21.59■■□□□ 1.05
HMGCR-208ENST00000509431 GJD4Q96KN9 370 aaPredicted RBP21.59■■□□□ 1.05
HMGCR-208ENST00000509431 ADGRL3Q9HAR2 1447 aa21.59■■□□□ 1.05
HMGCR-208ENST00000509431 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.05
HMGCR-208ENST00000509431 SOS2Q07890 1332 aaPredicted RBP21.58■■□□□ 1.05
HMGCR-208ENST00000509431 DEFB132Q7Z7B7 95 aa21.58■■□□□ 1.05
HMGCR-208ENST00000509431 BCL9LQ86UU0 1499 aa21.58■■□□□ 1.04
HMGCR-208ENST00000509431 CHGAP10645 457 aaKnown RBP21.57■■□□□ 1.04
HMGCR-208ENST00000509431 SPHKAPQ2M3C7 1700 aa21.57■■□□□ 1.04
HMGCR-208ENST00000509431 DAPK1P53355 1430 aa21.56■■□□□ 1.04
HMGCR-208ENST00000509431 HRCP23327 699 aa21.55■■□□□ 1.04
HMGCR-208ENST00000509431 C1orf167Q5SNV9 1468 aa21.54■■□□□ 1.04
HMGCR-208ENST00000509431 MARF1Q9Y4F3 1742 aaKnown RBP21.54■■□□□ 1.04
HMGCR-208ENST00000509431 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.53■■□□□ 1.04
HMGCR-208ENST00000509431 PTPN23Q9H3S7 1636 aa21.53■■□□□ 1.04
HMGCR-208ENST00000509431 NALCNQ8IZF0 1738 aa21.52■■□□□ 1.03
HMGCR-208ENST00000509431 MYOM2P54296 1465 aa21.52■■□□□ 1.03
HMGCR-208ENST00000509431 YY1P25490 414 aa21.5■■□□□ 1.03
HMGCR-208ENST00000509431 BRWD3Q6RI45 1802 aa21.49■■□□□ 1.03
HMGCR-208ENST00000509431 NRXN3Q9Y4C0 1643 aa21.48■■□□□ 1.03
HMGCR-208ENST00000509431 PSDA5PKW4 1024 aaPredicted RBP21.48■■□□□ 1.03
HMGCR-208ENST00000509431 RALGAPBQ86X10 1494 aa21.47■■□□□ 1.03
HMGCR-208ENST00000509431 GLI3P10071 1580 aa21.46■■□□□ 1.03
HMGCR-208ENST00000509431 BAG6P46379 1132 aa21.45■■□□□ 1.02
HMGCR-208ENST00000509431 CHIC2Q9UKJ5 165 aa21.45■■□□□ 1.02
HMGCR-208ENST00000509431 UNC5CLQ8IV45 518 aa21.44■■□□□ 1.02
HMGCR-208ENST00000509431 KANK4Q5T7N3 995 aaPredicted RBP21.43■■□□□ 1.02
HMGCR-208ENST00000509431 ORAI2Q96SN7 254 aa21.43■■□□□ 1.02
HMGCR-208ENST00000509431 METP08581 1390 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms