RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
LINC01088-205ENST00000509088 ZPR1O75312 459 aa12.41□□□□□ -0.42
LINC01088-205ENST00000509088 SLC10A3P09131 477 aa12.41□□□□□ -0.42
LINC01088-205ENST00000509088 BLOC1S3Q6QNY0 202 aa12.41□□□□□ -0.42
LINC01088-205ENST00000509088 PRKD2Q9BZL6 878 aa12.41□□□□□ -0.42
LINC01088-205ENST00000509088 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.41□□□□□ -0.42
LINC01088-205ENST00000509088 HIC1Q14526 733 aa12.4□□□□□ -0.42
LINC01088-205ENST00000509088 PCDHB3Q9Y5E6 796 aa12.4□□□□□ -0.42
LINC01088-205ENST00000509088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.38□□□□□ -0.43
LINC01088-205ENST00000509088 LCE2BO14633 110 aa12.38□□□□□ -0.43
LINC01088-205ENST00000509088 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
LINC01088-205ENST00000509088 ACTN4O43707 911 aaKnown RBP12.37□□□□□ -0.43
LINC01088-205ENST00000509088 METTL3Q86U44 580 aaKnown RBP12.37□□□□□ -0.43
LINC01088-205ENST00000509088 PRR14Q9BWN1 585 aa12.37□□□□□ -0.43
LINC01088-205ENST00000509088 TLL1O43897 1013 aa12.36□□□□□ -0.43
LINC01088-205ENST00000509088 CFHP08603 1231 aa12.36□□□□□ -0.43
LINC01088-205ENST00000509088 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
LINC01088-205ENST00000509088 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
LINC01088-205ENST00000509088 GNPATO15228 680 aa12.34□□□□□ -0.43
LINC01088-205ENST00000509088 OATP04181 439 aa12.34□□□□□ -0.43
LINC01088-205ENST00000509088 EMID1Q96A84 441 aaPredicted RBP12.33□□□□□ -0.44
LINC01088-205ENST00000509088 Q6ZNB5 142 aa12.32□□□□□ -0.44
LINC01088-205ENST00000509088 KMT5BQ4FZB7 885 aa12.31□□□□□ -0.44
LINC01088-205ENST00000509088 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
LINC01088-205ENST00000509088 TMUB1Q9BVT8 246 aa12.3□□□□□ -0.44
LINC01088-205ENST00000509088 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
LINC01088-205ENST00000509088 GFRA3O60609 400 aa12.29□□□□□ -0.44
LINC01088-205ENST00000509088 NLRP7Q8WX94 980 aa12.29□□□□□ -0.44
LINC01088-205ENST00000509088 LAPTM4AQ15012 233 aa12.28□□□□□ -0.44
LINC01088-205ENST00000509088 PHOX2BQ99453 314 aa12.28□□□□□ -0.44
LINC01088-205ENST00000509088 GGCXP38435 758 aa12.27□□□□□ -0.45
LINC01088-205ENST00000509088 NRG2O14511 850 aaPredicted RBP12.24□□□□□ -0.45
LINC01088-205ENST00000509088 S1PR4O95977 384 aa12.24□□□□□ -0.45
LINC01088-205ENST00000509088 PPEF1O14829 653 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-205ENST00000509088 PUS10Q3MIT2 529 aaKnown RBP12.23□□□□□ -0.45
LINC01088-205ENST00000509088 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-205ENST00000509088 TRIM67Q6ZTA4 783 aa12.22□□□□□ -0.45
LINC01088-205ENST00000509088 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
LINC01088-205ENST00000509088 ADH1BP00325 375 aa12.21□□□□□ -0.45
LINC01088-205ENST00000509088 SCUBE3Q8IX30 993 aa12.2□□□□□ -0.46
LINC01088-205ENST00000509088 ANKLE1Q8NAG6 615 aa12.2□□□□□ -0.46
LINC01088-205ENST00000509088 NR1I2O75469 434 aa12.19□□□□□ -0.46
LINC01088-205ENST00000509088 LIAT1Q6ZQX7 453 aa12.18□□□□□ -0.46
LINC01088-205ENST00000509088 SLC19A1P41440 591 aa12.17□□□□□ -0.46
LINC01088-205ENST00000509088 PLA2G2CQ5R387 149 aa12.17□□□□□ -0.46
LINC01088-205ENST00000509088 TRAF7Q6Q0C0 670 aa12.17□□□□□ -0.46
LINC01088-205ENST00000509088 PDZRN3Q9UPQ7 1066 aa12.17□□□□□ -0.46
LINC01088-205ENST00000509088 DDX11L8A8MPP1 907 aa12.16□□□□□ -0.46
LINC01088-205ENST00000509088 FUT2Q10981 343 aa12.15□□□□□ -0.46
LINC01088-205ENST00000509088 MORN1Q5T089 497 aa12.15□□□□□ -0.46
LINC01088-205ENST00000509088 SPRYD7Q5W111 196 aa12.15□□□□□ -0.46
LINC01088-205ENST00000509088 RDH13Q8NBN7 331 aa12.15□□□□□ -0.46
LINC01088-205ENST00000509088 VSIG10Q8N0Z9 540 aa12.14□□□□□ -0.47
LINC01088-205ENST00000509088 THAP11Q96EK4 314 aa12.14□□□□□ -0.47
LINC01088-205ENST00000509088 SLC6A16Q9GZN6 736 aa12.14□□□□□ -0.47
LINC01088-205ENST00000509088 GCGRP47871 477 aa12.13□□□□□ -0.47
LINC01088-205ENST00000509088 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
LINC01088-205ENST00000509088 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
LINC01088-205ENST00000509088 SPSB2Q99619 263 aa12.11□□□□□ -0.47
LINC01088-205ENST00000509088 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
LINC01088-205ENST00000509088 MAP2K5Q13163 448 aa12.09□□□□□ -0.47
LINC01088-205ENST00000509088 SLC27A5Q9Y2P5 690 aa12.09□□□□□ -0.47
LINC01088-205ENST00000509088 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
LINC01088-205ENST00000509088 FAM160A2Q8N612 972 aaPredicted RBP12.07□□□□□ -0.48
LINC01088-205ENST00000509088 GDF9O60383 454 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 PRR20EP86478 221 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 PRR20CP86479 221 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 PRR20DP86480 221 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 PRR20BP86481 221 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 PRR20AP86496 221 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 IRF6O14896 467 aa12.05□□□□□ -0.48
LINC01088-205ENST00000509088 CD46P15529 392 aa12.05□□□□□ -0.48
LINC01088-205ENST00000509088 PRDM9Q9NQV7 894 aa12.05□□□□□ -0.48
LINC01088-205ENST00000509088 BRICD5Q6PL45 260 aa12.04□□□□□ -0.48
LINC01088-205ENST00000509088 RNF19BQ6ZMZ0 732 aa12.03□□□□□ -0.48
LINC01088-205ENST00000509088 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
LINC01088-205ENST00000509088 FMNL1O95466 1100 aaPredicted RBP12.01□□□□□ -0.49
LINC01088-205ENST00000509088 FCF1Q9Y324 198 aaKnown RBP12.01□□□□□ -0.49
LINC01088-205ENST00000509088 TNFRSF10AO00220 468 aa12□□□□□ -0.49
LINC01088-205ENST00000509088 CCDC102AQ96A19 550 aa12□□□□□ -0.49
LINC01088-205ENST00000509088 PKD2L1Q9P0L9 805 aa12□□□□□ -0.49
LINC01088-205ENST00000509088 MDM2Q00987 491 aaPredicted RBP11.99□□□□□ -0.49
LINC01088-205ENST00000509088 MINK1Q8N4C8 1332 aaPredicted RBP11.99□□□□□ -0.49
LINC01088-205ENST00000509088 MYT1Q01538 1121 aa11.97□□□□□ -0.49
LINC01088-205ENST00000509088 MSS51Q4VC12 460 aa11.97□□□□□ -0.49
LINC01088-205ENST00000509088 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC01088-205ENST00000509088 HLA-CQ95604 372 aa11.97□□□□□ -0.49
LINC01088-205ENST00000509088 RPIAP49247 311 aa11.95□□□□□ -0.5
LINC01088-205ENST00000509088 TULP1O00294 542 aaPredicted RBP11.94□□□□□ -0.5
LINC01088-205ENST00000509088 DGAT1O75907 488 aa11.94□□□□□ -0.5
LINC01088-205ENST00000509088 KDM4AO75164 1064 aa11.93□□□□□ -0.5
LINC01088-205ENST00000509088 PKDCCQ504Y2 493 aa11.93□□□□□ -0.5
LINC01088-205ENST00000509088 FAM187AA6NFU0 413 aa11.91□□□□□ -0.5
LINC01088-205ENST00000509088 GRIPAP1Q4V328 841 aa11.91□□□□□ -0.5
LINC01088-205ENST00000509088 REPIN1Q9BWE0 567 aaKnown RBP11.91□□□□□ -0.5
LINC01088-205ENST00000509088 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
LINC01088-205ENST00000509088 MMP16P51512 607 aa11.9□□□□□ -0.5
LINC01088-205ENST00000509088 ZNF787Q6DD87 383 aa11.9□□□□□ -0.5
LINC01088-205ENST00000509088 HOXA2O43364 376 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms