RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
LINC01088-205ENST00000509088 ZPR1O75312 459 aa12.41□□□□□ -0.42
LINC01088-205ENST00000509088 SLC10A3P09131 477 aa12.41□□□□□ -0.42
LINC01088-205ENST00000509088 BLOC1S3Q6QNY0 202 aa12.41□□□□□ -0.42
LINC01088-205ENST00000509088 PRKD2Q9BZL6 878 aa12.41□□□□□ -0.42
LINC01088-205ENST00000509088 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.41□□□□□ -0.42
LINC01088-205ENST00000509088 HIC1Q14526 733 aa12.4□□□□□ -0.42
LINC01088-205ENST00000509088 PCDHB3Q9Y5E6 796 aa12.4□□□□□ -0.42
LINC01088-205ENST00000509088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.38□□□□□ -0.43
LINC01088-205ENST00000509088 LCE2BO14633 110 aa12.38□□□□□ -0.43
LINC01088-205ENST00000509088 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
LINC01088-205ENST00000509088 ACTN4O43707 911 aaKnown RBP12.37□□□□□ -0.43
LINC01088-205ENST00000509088 METTL3Q86U44 580 aaKnown RBP12.37□□□□□ -0.43
LINC01088-205ENST00000509088 PRR14Q9BWN1 585 aa12.37□□□□□ -0.43
LINC01088-205ENST00000509088 TLL1O43897 1013 aa12.36□□□□□ -0.43
LINC01088-205ENST00000509088 CFHP08603 1231 aa12.36□□□□□ -0.43
LINC01088-205ENST00000509088 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
LINC01088-205ENST00000509088 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
LINC01088-205ENST00000509088 GNPATO15228 680 aa12.34□□□□□ -0.43
LINC01088-205ENST00000509088 OATP04181 439 aa12.34□□□□□ -0.43
LINC01088-205ENST00000509088 EMID1Q96A84 441 aaPredicted RBP12.33□□□□□ -0.44
LINC01088-205ENST00000509088 Q6ZNB5 142 aa12.32□□□□□ -0.44
LINC01088-205ENST00000509088 KMT5BQ4FZB7 885 aa12.31□□□□□ -0.44
LINC01088-205ENST00000509088 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
LINC01088-205ENST00000509088 TMUB1Q9BVT8 246 aa12.3□□□□□ -0.44
LINC01088-205ENST00000509088 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
LINC01088-205ENST00000509088 GFRA3O60609 400 aa12.29□□□□□ -0.44
LINC01088-205ENST00000509088 NLRP7Q8WX94 980 aa12.29□□□□□ -0.44
LINC01088-205ENST00000509088 LAPTM4AQ15012 233 aa12.28□□□□□ -0.44
LINC01088-205ENST00000509088 PHOX2BQ99453 314 aa12.28□□□□□ -0.44
LINC01088-205ENST00000509088 GGCXP38435 758 aa12.27□□□□□ -0.45
LINC01088-205ENST00000509088 NRG2O14511 850 aaPredicted RBP12.24□□□□□ -0.45
LINC01088-205ENST00000509088 S1PR4O95977 384 aa12.24□□□□□ -0.45
LINC01088-205ENST00000509088 PPEF1O14829 653 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-205ENST00000509088 PUS10Q3MIT2 529 aaKnown RBP12.23□□□□□ -0.45
LINC01088-205ENST00000509088 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
LINC01088-205ENST00000509088 TRIM67Q6ZTA4 783 aa12.22□□□□□ -0.45
LINC01088-205ENST00000509088 GPIHBP1Q8IV16 184 aa12.22□□□□□ -0.45
LINC01088-205ENST00000509088 ADH1BP00325 375 aa12.21□□□□□ -0.45
LINC01088-205ENST00000509088 SCUBE3Q8IX30 993 aa12.2□□□□□ -0.46
LINC01088-205ENST00000509088 ANKLE1Q8NAG6 615 aa12.2□□□□□ -0.46
LINC01088-205ENST00000509088 NR1I2O75469 434 aa12.19□□□□□ -0.46
LINC01088-205ENST00000509088 LIAT1Q6ZQX7 453 aa12.18□□□□□ -0.46
LINC01088-205ENST00000509088 SLC19A1P41440 591 aa12.17□□□□□ -0.46
LINC01088-205ENST00000509088 PLA2G2CQ5R387 149 aa12.17□□□□□ -0.46
LINC01088-205ENST00000509088 TRAF7Q6Q0C0 670 aa12.17□□□□□ -0.46
LINC01088-205ENST00000509088 PDZRN3Q9UPQ7 1066 aa12.17□□□□□ -0.46
LINC01088-205ENST00000509088 DDX11L8A8MPP1 907 aa12.16□□□□□ -0.46
LINC01088-205ENST00000509088 FUT2Q10981 343 aa12.15□□□□□ -0.46
LINC01088-205ENST00000509088 MORN1Q5T089 497 aa12.15□□□□□ -0.46
LINC01088-205ENST00000509088 SPRYD7Q5W111 196 aa12.15□□□□□ -0.46
LINC01088-205ENST00000509088 RDH13Q8NBN7 331 aa12.15□□□□□ -0.46
LINC01088-205ENST00000509088 VSIG10Q8N0Z9 540 aa12.14□□□□□ -0.47
LINC01088-205ENST00000509088 THAP11Q96EK4 314 aa12.14□□□□□ -0.47
LINC01088-205ENST00000509088 SLC6A16Q9GZN6 736 aa12.14□□□□□ -0.47
LINC01088-205ENST00000509088 GCGRP47871 477 aa12.13□□□□□ -0.47
LINC01088-205ENST00000509088 RSPH4AQ5TD94 716 aa12.13□□□□□ -0.47
LINC01088-205ENST00000509088 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
LINC01088-205ENST00000509088 SPSB2Q99619 263 aa12.11□□□□□ -0.47
LINC01088-205ENST00000509088 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
LINC01088-205ENST00000509088 MAP2K5Q13163 448 aa12.09□□□□□ -0.47
LINC01088-205ENST00000509088 SLC27A5Q9Y2P5 690 aa12.09□□□□□ -0.47
LINC01088-205ENST00000509088 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
LINC01088-205ENST00000509088 FAM160A2Q8N612 972 aaPredicted RBP12.07□□□□□ -0.48
LINC01088-205ENST00000509088 GDF9O60383 454 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 PRR20EP86478 221 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 PRR20CP86479 221 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 PRR20DP86480 221 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 PRR20BP86481 221 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 PRR20AP86496 221 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
LINC01088-205ENST00000509088 IRF6O14896 467 aa12.05□□□□□ -0.48
LINC01088-205ENST00000509088 CD46P15529 392 aa12.05□□□□□ -0.48
LINC01088-205ENST00000509088 PRDM9Q9NQV7 894 aa12.05□□□□□ -0.48
LINC01088-205ENST00000509088 BRICD5Q6PL45 260 aa12.04□□□□□ -0.48
LINC01088-205ENST00000509088 RNF19BQ6ZMZ0 732 aa12.03□□□□□ -0.48
LINC01088-205ENST00000509088 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
LINC01088-205ENST00000509088 FMNL1O95466 1100 aaPredicted RBP12.01□□□□□ -0.49
LINC01088-205ENST00000509088 FCF1Q9Y324 198 aaKnown RBP12.01□□□□□ -0.49
LINC01088-205ENST00000509088 TNFRSF10AO00220 468 aa12□□□□□ -0.49
LINC01088-205ENST00000509088 CCDC102AQ96A19 550 aa12□□□□□ -0.49
LINC01088-205ENST00000509088 PKD2L1Q9P0L9 805 aa12□□□□□ -0.49
LINC01088-205ENST00000509088 MDM2Q00987 491 aaPredicted RBP11.99□□□□□ -0.49
LINC01088-205ENST00000509088 MINK1Q8N4C8 1332 aaPredicted RBP11.99□□□□□ -0.49
LINC01088-205ENST00000509088 MYT1Q01538 1121 aa11.97□□□□□ -0.49
LINC01088-205ENST00000509088 MSS51Q4VC12 460 aa11.97□□□□□ -0.49
LINC01088-205ENST00000509088 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC01088-205ENST00000509088 HLA-CQ95604 372 aa11.97□□□□□ -0.49
LINC01088-205ENST00000509088 RPIAP49247 311 aa11.95□□□□□ -0.5
LINC01088-205ENST00000509088 TULP1O00294 542 aaPredicted RBP11.94□□□□□ -0.5
LINC01088-205ENST00000509088 DGAT1O75907 488 aa11.94□□□□□ -0.5
LINC01088-205ENST00000509088 KDM4AO75164 1064 aa11.93□□□□□ -0.5
LINC01088-205ENST00000509088 PKDCCQ504Y2 493 aa11.93□□□□□ -0.5
LINC01088-205ENST00000509088 FAM187AA6NFU0 413 aa11.91□□□□□ -0.5
LINC01088-205ENST00000509088 GRIPAP1Q4V328 841 aa11.91□□□□□ -0.5
LINC01088-205ENST00000509088 REPIN1Q9BWE0 567 aaKnown RBP11.91□□□□□ -0.5
LINC01088-205ENST00000509088 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
LINC01088-205ENST00000509088 MMP16P51512 607 aa11.9□□□□□ -0.5
LINC01088-205ENST00000509088 ZNF787Q6DD87 383 aa11.9□□□□□ -0.5
LINC01088-205ENST00000509088 HOXA2O43364 376 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms