RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 KDM5AP29375 1690 aaKnown RBP15.29■□□□□ 0.04
UBE2D3-227ENST00000508818 LRRC7Q96NW7 1537 aa15.29■□□□□ 0.04
UBE2D3-227ENST00000508818 KCNA6P17658 529 aa15.28■□□□□ 0.04
UBE2D3-227ENST00000508818 UNC13BO14795 1591 aa15.28■□□□□ 0.04
UBE2D3-227ENST00000508818 ADGRB3O60242 1522 aa15.27■□□□□ 0.04
UBE2D3-227ENST00000508818 PROSER2Q86WR7 435 aaPredicted RBP15.27■□□□□ 0.04
UBE2D3-227ENST00000508818 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.27■□□□□ 0.04
UBE2D3-227ENST00000508818 STRCP1A6NGW2 1772 aa15.26■□□□□ 0.03
UBE2D3-227ENST00000508818 GCC2Q8IWJ2 1684 aa15.25■□□□□ 0.03
UBE2D3-227ENST00000508818 RIMS2Q9UQ26 1411 aa15.25■□□□□ 0.03
UBE2D3-227ENST00000508818 NUTM2DQ5VT03 806 aaPredicted RBP15.23■□□□□ 0.03
UBE2D3-227ENST00000508818 IQGAP3Q86VI3 1631 aa15.22■□□□□ 0.03
UBE2D3-227ENST00000508818 ILDR2Q71H61 639 aa15.22■□□□□ 0.03
UBE2D3-227ENST00000508818 TMEM94Q12767 1356 aa15.22■□□□□ 0.03
UBE2D3-227ENST00000508818 PLEKHG1Q9ULL1 1385 aa15.22■□□□□ 0.03
UBE2D3-227ENST00000508818 RRBP1Q9P2E9 1410 aaKnown RBP15.21■□□□□ 0.03
UBE2D3-227ENST00000508818 CNKSR2Q8WXI2 1034 aa15.21■□□□□ 0.03
UBE2D3-227ENST00000508818 TRIM52Q96A61 297 aa15.21■□□□□ 0.03
UBE2D3-227ENST00000508818 E9PCH4 1651 aa15.21■□□□□ 0.03
UBE2D3-227ENST00000508818 ZNF326Q5BKZ1 582 aaKnown RBP15.2■□□□□ 0.02
UBE2D3-227ENST00000508818 RBM33Q96EV2 1170 aaKnown RBP15.2■□□□□ 0.02
UBE2D3-227ENST00000508818 TBX22Q9Y458 520 aa15.2■□□□□ 0.02
UBE2D3-227ENST00000508818 ZFYVE9O95405 1425 aa15.19■□□□□ 0.02
UBE2D3-227ENST00000508818 TMEM131LA2VDJ0 1609 aa15.19■□□□□ 0.02
UBE2D3-227ENST00000508818 C14orf37Q86TY3 774 aa15.18■□□□□ 0.02
UBE2D3-227ENST00000508818 MYO5BQ9ULV0 1848 aa15.17■□□□□ 0.02
UBE2D3-227ENST00000508818 MSH6P52701 1360 aa15.16■□□□□ 0.02
UBE2D3-227ENST00000508818 SOCS7O14512 581 aa15.16■□□□□ 0.02
UBE2D3-227ENST00000508818 ALKQ9UM73 1620 aa15.16■□□□□ 0.02
UBE2D3-227ENST00000508818 NAIPQ13075 1403 aa15.15■□□□□ 0.02
UBE2D3-227ENST00000508818 NKTRP30414 1462 aaKnown RBP15.14■□□□□ 0.01
UBE2D3-227ENST00000508818 XIRP1Q702N8 1843 aaKnown RBP15.13■□□□□ 0.01
UBE2D3-227ENST00000508818 FAM135BQ49AJ0 1406 aa15.12■□□□□ 0.01
UBE2D3-227ENST00000508818 HOXD11P31277 338 aaPredicted RBP15.12■□□□□ 0.01
UBE2D3-227ENST00000508818 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
UBE2D3-227ENST00000508818 SLAIN2Q9P270 581 aa15.12■□□□□ 0.01
UBE2D3-227ENST00000508818 NWD1Q149M9 1564 aa15.11■□□□□ 0.01
UBE2D3-227ENST00000508818 MED1Q15648 1581 aaPredicted RBP15.11■□□□□ 0.01
UBE2D3-227ENST00000508818 PIK3R4Q99570 1358 aa15.11■□□□□ 0.01
UBE2D3-227ENST00000508818 AMOTL2Q9Y2J4 779 aa15.1■□□□□ 0.01
UBE2D3-227ENST00000508818 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
UBE2D3-227ENST00000508818 ADAMTS13Q76LX8 1427 aa15.09■□□□□ 0.01
UBE2D3-227ENST00000508818 SPHKAPQ2M3C7 1700 aa15.09■□□□□ 0.01
UBE2D3-227ENST00000508818 CHD2O14647 1828 aaKnown RBP15.09■□□□□ 0.01
UBE2D3-227ENST00000508818 ATF3P18847 181 aa15.09■□□□□ 0.01
UBE2D3-227ENST00000508818 DIP2AQ14689 1571 aa15.08■□□□□ 0
UBE2D3-227ENST00000508818 C19orf44Q9H6X5 657 aa15.08■□□□□ 0
UBE2D3-227ENST00000508818 NCOA3Q9Y6Q9 1424 aa15.08■□□□□ 0
UBE2D3-227ENST00000508818 CADPS2Q86UW7 1296 aa15.07■□□□□ 0
UBE2D3-227ENST00000508818 TRPM2O94759 1503 aa15.07■□□□□ 0
UBE2D3-227ENST00000508818 RNF216Q9NWF9 866 aaPredicted RBP15.06■□□□□ 0
UBE2D3-227ENST00000508818 VGFO15240 615 aaPredicted RBP15.05■□□□□ -0
UBE2D3-227ENST00000508818 ROBO1Q9Y6N7 1651 aa15.04■□□□□ -0
UBE2D3-227ENST00000508818 CLTCL1P53675 1640 aa15.03■□□□□ -0
UBE2D3-227ENST00000508818 RPGRIP1LQ68CZ1 1315 aa15.02■□□□□ -0
UBE2D3-227ENST00000508818 KIF1BO60333 1816 aa15.02■□□□□ -0
UBE2D3-227ENST00000508818 NCBP3Q53F19 620 aaKnown RBP15.02■□□□□ -0
UBE2D3-227ENST00000508818 PTPRUQ92729 1446 aa15□□□□□ -0.01
UBE2D3-227ENST00000508818 METP08581 1390 aa15□□□□□ -0.01
UBE2D3-227ENST00000508818 ACIN1Q9UKV3 1341 aaKnown RBP15□□□□□ -0.01
UBE2D3-227ENST00000508818 SETBP1Q9Y6X0 1596 aa15□□□□□ -0.01
UBE2D3-227ENST00000508818 MPHOSPH9Q99550 1183 aa15□□□□□ -0.01
UBE2D3-227ENST00000508818 NEXMIFQ5QGS0 1516 aa14.98□□□□□ -0.01
UBE2D3-227ENST00000508818 JCADQ9P266 1359 aa14.98□□□□□ -0.01
UBE2D3-227ENST00000508818 RGL3Q3MIN7 710 aa14.97□□□□□ -0.01
UBE2D3-227ENST00000508818 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
UBE2D3-227ENST00000508818 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.97□□□□□ -0.01
UBE2D3-227ENST00000508818 NRXN3Q9Y4C0 1643 aa14.96□□□□□ -0.01
UBE2D3-227ENST00000508818 CCDC144AA2RUR9 1427 aa14.96□□□□□ -0.01
UBE2D3-227ENST00000508818 MEX3CQ5U5Q3 659 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-227ENST00000508818 BRINP3Q76B58 766 aa14.94□□□□□ -0.02
UBE2D3-227ENST00000508818 DCCP43146 1447 aa14.93□□□□□ -0.02
UBE2D3-227ENST00000508818 SETD5Q9C0A6 1442 aa14.93□□□□□ -0.02
UBE2D3-227ENST00000508818 XRN1Q8IZH2 1706 aaKnown RBP14.93□□□□□ -0.02
UBE2D3-227ENST00000508818 RGS17Q9UGC6 210 aaPredicted RBP14.93□□□□□ -0.02
UBE2D3-227ENST00000508818 DCAF8L1A6NGE4 600 aa14.92□□□□□ -0.02
UBE2D3-227ENST00000508818 ADGRL3Q9HAR2 1447 aa14.91□□□□□ -0.02
UBE2D3-227ENST00000508818 SPATA31A6Q5VVP1 1343 aa14.91□□□□□ -0.02
UBE2D3-227ENST00000508818 ANKRD30BQ9BXX2 1392 aa14.89□□□□□ -0.03
UBE2D3-227ENST00000508818 NUTM2BA6NNL0 878 aaPredicted RBP14.89□□□□□ -0.03
UBE2D3-227ENST00000508818 NUTM2EB1AL46 878 aaPredicted RBP14.89□□□□□ -0.03
UBE2D3-227ENST00000508818 NUTM2AQ8IVF1 878 aaPredicted RBP14.89□□□□□ -0.03
UBE2D3-227ENST00000508818 LRRC59Q96AG4 307 aaKnown RBP14.89□□□□□ -0.03
UBE2D3-227ENST00000508818 STK26Q9P289 416 aa14.89□□□□□ -0.03
UBE2D3-227ENST00000508818 MST1RQ04912 1400 aa14.89□□□□□ -0.03
UBE2D3-227ENST00000508818 ADGRF5Q8IZF2 1346 aa14.89□□□□□ -0.03
UBE2D3-227ENST00000508818 POTEAQ6S8J7 498 aa14.88□□□□□ -0.03
UBE2D3-227ENST00000508818 COL16A1Q07092 1604 aaPredicted RBP14.88□□□□□ -0.03
UBE2D3-227ENST00000508818 AHDC1Q5TGY3 1603 aaPredicted RBP14.88□□□□□ -0.03
UBE2D3-227ENST00000508818 ROBO2Q9HCK4 1378 aa14.87□□□□□ -0.03
UBE2D3-227ENST00000508818 PTCH1Q13635 1447 aa14.87□□□□□ -0.03
UBE2D3-227ENST00000508818 PPLO60437 1756 aa14.87□□□□□ -0.03
UBE2D3-227ENST00000508818 ASXL1Q8IXJ9 1541 aa14.86□□□□□ -0.03
UBE2D3-227ENST00000508818 RAB3GAP2Q9H2M9 1393 aa14.85□□□□□ -0.03
UBE2D3-227ENST00000508818 SPATA31E1Q6ZUB1 1445 aa14.85□□□□□ -0.03
UBE2D3-227ENST00000508818 ZNF772Q68DY9 489 aaPredicted RBP14.85□□□□□ -0.03
UBE2D3-227ENST00000508818 TMEM132EQ6IEE7 984 aa14.84□□□□□ -0.03
UBE2D3-227ENST00000508818 DDX17Q92841 729 aaKnown RBP14.84□□□□□ -0.03
UBE2D3-227ENST00000508818 ORAI2Q96SN7 254 aa14.83□□□□□ -0.04
UBE2D3-227ENST00000508818 C1orf167Q5SNV9 1468 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms