RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 SMARCA2P51531 1590 aa11.11□□□□□ -0.63
KLHL3-209ENST00000508657 TOM1L2Q6ZVM7 507 aa11.11□□□□□ -0.63
KLHL3-209ENST00000508657 PDS5BQ9NTI5 1447 aa11.11□□□□□ -0.63
KLHL3-209ENST00000508657 KIF16BQ96L93 1317 aa11.11□□□□□ -0.63
KLHL3-209ENST00000508657 HDAC5Q9UQL6 1122 aa11.11□□□□□ -0.63
KLHL3-209ENST00000508657 MSNP26038 577 aaKnown RBP11.1□□□□□ -0.63
KLHL3-209ENST00000508657 HMOX1P09601 288 aa11.1□□□□□ -0.63
KLHL3-209ENST00000508657 EIF3AQ14152 1382 aaKnown RBP11.1□□□□□ -0.63
KLHL3-209ENST00000508657 CHMP4AQ9BY43 222 aa11.1□□□□□ -0.63
KLHL3-209ENST00000508657 CCAR2Q8N163 923 aaKnown RBP11.09□□□□□ -0.63
KLHL3-209ENST00000508657 WASHC4Q2M389 1173 aa11.09□□□□□ -0.63
KLHL3-209ENST00000508657 ZSCAN29Q8IWY8 852 aaPredicted RBP11.09□□□□□ -0.63
KLHL3-209ENST00000508657 TPM3P06753 285 aa11.09□□□□□ -0.63
KLHL3-209ENST00000508657 ABTB2Q8N961 1025 aa11.09□□□□□ -0.63
KLHL3-209ENST00000508657 LMOD3Q0VAK6 560 aa11.09□□□□□ -0.63
KLHL3-209ENST00000508657 ERICH2A1L162 156 aa11.08□□□□□ -0.64
KLHL3-209ENST00000508657 TRIM29Q14134 588 aa11.08□□□□□ -0.64
KLHL3-209ENST00000508657 WDR78Q5VTH9 848 aa11.08□□□□□ -0.64
KLHL3-209ENST00000508657 CA8P35219 290 aa11.08□□□□□ -0.64
KLHL3-209ENST00000508657 EEA1Q15075 1411 aa11.07□□□□□ -0.64
KLHL3-209ENST00000508657 RWDD1Q9H446 243 aaPredicted RBP11.07□□□□□ -0.64
KLHL3-209ENST00000508657 NLRP6P59044 892 aa11.07□□□□□ -0.64
KLHL3-209ENST00000508657 ODF2Q5BJF6 829 aa11.07□□□□□ -0.64
KLHL3-209ENST00000508657 CT47A1Q5JQC4 288 aaPredicted RBP11.07□□□□□ -0.64
KLHL3-209ENST00000508657 IFIT2P09913 472 aaKnown RBP11.07□□□□□ -0.64
KLHL3-209ENST00000508657 KIF6Q6ZMV9 814 aa11.07□□□□□ -0.64
KLHL3-209ENST00000508657 TMEM87AQ8NBN3 555 aa11.07□□□□□ -0.64
KLHL3-209ENST00000508657 MPHOSPH9Q99550 1183 aa11.07□□□□□ -0.64
KLHL3-209ENST00000508657 TPM2P07951 284 aa11.06□□□□□ -0.64
KLHL3-209ENST00000508657 SPINK5Q9NQ38 1064 aaPredicted RBP11.06□□□□□ -0.64
KLHL3-209ENST00000508657 TXNDC2Q86VQ3 553 aa11.06□□□□□ -0.64
KLHL3-209ENST00000508657 RRP12Q5JTH9 1297 aaKnown RBP11.06□□□□□ -0.64
KLHL3-209ENST00000508657 MPHOSPH10O00566 681 aaKnown RBP11.06□□□□□ -0.64
KLHL3-209ENST00000508657 WASHC2AQ641Q2 1341 aa11.06□□□□□ -0.64
KLHL3-209ENST00000508657 ANKRD30AQ9BXX3 1397 aa11.06□□□□□ -0.64
KLHL3-209ENST00000508657 TSR1Q2NL82 804 aaKnown RBP11.06□□□□□ -0.64
KLHL3-209ENST00000508657 ANKRD45Q5TZF3 282 aa11.06□□□□□ -0.64
KLHL3-209ENST00000508657 DIAPH3Q9NSV4 1193 aa11.06□□□□□ -0.64
KLHL3-209ENST00000508657 ANO2Q9NQ90 1003 aa11.05□□□□□ -0.64
KLHL3-209ENST00000508657 FKBP5Q13451 457 aaPredicted RBP11.05□□□□□ -0.64
KLHL3-209ENST00000508657 DDX58O95786 925 aaKnown RBP11.05□□□□□ -0.64
KLHL3-209ENST00000508657 TRDNQ13061 729 aa11.04□□□□□ -0.64
KLHL3-209ENST00000508657 CPLX1O14810 134 aa11.04□□□□□ -0.64
KLHL3-209ENST00000508657 G3BP1Q13283 466 aaKnown RBP eCLIP11.04□□□□□ -0.64
KLHL3-209ENST00000508657 TSPYL4Q9UJ04 414 aa11.04□□□□□ -0.64
KLHL3-209ENST00000508657 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
KLHL3-209ENST00000508657 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
KLHL3-209ENST00000508657 C16orf71Q8IYS4 520 aaPredicted RBP11.04□□□□□ -0.64
KLHL3-209ENST00000508657 CCDC97Q96F63 343 aaPredicted RBP11.04□□□□□ -0.64
KLHL3-209ENST00000508657 CCDC180Q9P1Z9 1646 aa11.03□□□□□ -0.64
KLHL3-209ENST00000508657 NAP1L1P55209 391 aaKnown RBP11.03□□□□□ -0.64
KLHL3-209ENST00000508657 ARHGAP35Q9NRY4 1499 aa11.02□□□□□ -0.65
KLHL3-209ENST00000508657 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
KLHL3-209ENST00000508657 EVC2Q86UK5 1308 aa11.02□□□□□ -0.65
KLHL3-209ENST00000508657 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
KLHL3-209ENST00000508657 CNNM1Q9NRU3 951 aa11.02□□□□□ -0.65
KLHL3-209ENST00000508657 CCDC85AQ96PX6 553 aaPredicted RBP11.01□□□□□ -0.65
KLHL3-209ENST00000508657 ATP2B1P20020 1258 aa11.01□□□□□ -0.65
KLHL3-209ENST00000508657 TMEM132EQ6IEE7 984 aa11.01□□□□□ -0.65
KLHL3-209ENST00000508657 CABP2Q9NPB3 220 aa11.01□□□□□ -0.65
KLHL3-209ENST00000508657 PPP4R2Q9NY27 417 aa11.01□□□□□ -0.65
KLHL3-209ENST00000508657 TTC16Q8NEE8 873 aa11.01□□□□□ -0.65
KLHL3-209ENST00000508657 MATR3P43243 847 aaKnown RBP eCLIP11.01□□□□□ -0.65
KLHL3-209ENST00000508657 FHAD1B1AJZ9 1412 aa11□□□□□ -0.65
KLHL3-209ENST00000508657 PHF14O94880 888 aa11□□□□□ -0.65
KLHL3-209ENST00000508657 CENPJQ9HC77 1338 aaPredicted RBP11□□□□□ -0.65
KLHL3-209ENST00000508657 DNAJC2Q99543 621 aaKnown RBP11□□□□□ -0.65
KLHL3-209ENST00000508657 RCAN3Q9UKA8 241 aa11□□□□□ -0.65
KLHL3-209ENST00000508657 MYL6BP14649 208 aa11□□□□□ -0.65
KLHL3-209ENST00000508657 CEP164Q9UPV0 1460 aa11□□□□□ -0.65
KLHL3-209ENST00000508657 GPRASP1Q5JY77 1395 aa11□□□□□ -0.65
KLHL3-209ENST00000508657 EPS15P42566 896 aa11□□□□□ -0.65
KLHL3-209ENST00000508657 CABP4P57796 275 aa11□□□□□ -0.65
KLHL3-209ENST00000508657 GOLGA6L1Q8N7Z2 621 aa10.99□□□□□ -0.65
KLHL3-209ENST00000508657 PANK3Q9H999 370 aa10.99□□□□□ -0.65
KLHL3-209ENST00000508657 CCDC47Q96A33 483 aaKnown RBP10.99□□□□□ -0.65
KLHL3-209ENST00000508657 LRRFIP1Q32MZ4 808 aaKnown RBP10.99□□□□□ -0.65
KLHL3-209ENST00000508657 PIBF1Q8WXW3 757 aa10.99□□□□□ -0.65
KLHL3-209ENST00000508657 KANK4Q5T7N3 995 aaPredicted RBP10.98□□□□□ -0.65
KLHL3-209ENST00000508657 CPLX2Q6PUV4 134 aaKnown RBP10.98□□□□□ -0.65
KLHL3-209ENST00000508657 ZC3H6P61129 1189 aaKnown RBP10.98□□□□□ -0.65
KLHL3-209ENST00000508657 ZHX3Q9H4I2 956 aa10.98□□□□□ -0.65
KLHL3-209ENST00000508657 PRDM11Q9NQV5 511 aa10.98□□□□□ -0.65
KLHL3-209ENST00000508657 SLC26A8Q96RN1 970 aa10.98□□□□□ -0.65
KLHL3-209ENST00000508657 KIF3AQ9Y496 699 aa10.98□□□□□ -0.65
KLHL3-209ENST00000508657 PTPRGP23470 1445 aa10.98□□□□□ -0.65
KLHL3-209ENST00000508657 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.98□□□□□ -0.65
KLHL3-209ENST00000508657 GBP4Q96PP9 640 aa10.97□□□□□ -0.65
KLHL3-209ENST00000508657 SKIDA1Q1XH10 827 aa10.97□□□□□ -0.65
KLHL3-209ENST00000508657 HSP90AB2PQ58FF8 381 aa10.97□□□□□ -0.65
KLHL3-209ENST00000508657 SCLT1Q96NL6 688 aa10.97□□□□□ -0.65
KLHL3-209ENST00000508657 GGNBP2Q9H3C7 697 aa10.97□□□□□ -0.65
KLHL3-209ENST00000508657 E9PSI1 815 aa10.97□□□□□ -0.65
KLHL3-209ENST00000508657 PODXL2Q9NZ53 605 aa10.97□□□□□ -0.65
KLHL3-209ENST00000508657 RIPK4P57078 832 aa10.96□□□□□ -0.65
KLHL3-209ENST00000508657 DIAPH1O60610 1272 aaKnown RBP10.96□□□□□ -0.65
KLHL3-209ENST00000508657 WDHD1O75717 1129 aaPredicted RBP10.96□□□□□ -0.65
KLHL3-209ENST00000508657 NOP58Q9Y2X3 529 aaKnown RBP10.96□□□□□ -0.66
KLHL3-209ENST00000508657 CGNL1Q0VF96 1302 aa10.96□□□□□ -0.66
KLHL3-209ENST00000508657 SYAP1Q96A49 352 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms