RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SLAIN2Q9P270 581 aa14.91□□□□□ -0.02
NEDD9-211ENST00000508546 EFCAB6Q5THR3 1501 aa14.91□□□□□ -0.02
NEDD9-211ENST00000508546 AFF2P51816 1311 aa14.89□□□□□ -0.03
NEDD9-211ENST00000508546 LMTK2Q8IWU2 1503 aa14.88□□□□□ -0.03
NEDD9-211ENST00000508546 KANK4Q5T7N3 995 aaPredicted RBP14.88□□□□□ -0.03
NEDD9-211ENST00000508546 ABCC5O15440 1437 aa14.88□□□□□ -0.03
NEDD9-211ENST00000508546 KANK1Q14678 1352 aa14.87□□□□□ -0.03
NEDD9-211ENST00000508546 SLC26A8Q96RN1 970 aa14.87□□□□□ -0.03
NEDD9-211ENST00000508546 PTPN23Q9H3S7 1636 aa14.87□□□□□ -0.03
NEDD9-211ENST00000508546 EP400Q96L91 3159 aa14.87□□□□□ -0.03
NEDD9-211ENST00000508546 STAG3Q9UJ98 1225 aa14.86□□□□□ -0.03
NEDD9-211ENST00000508546 CHD2O14647 1828 aaKnown RBP14.85□□□□□ -0.03
NEDD9-211ENST00000508546 IDI1Q13907 227 aa14.85□□□□□ -0.03
NEDD9-211ENST00000508546 RRP7BPQ9NSQ0 103 aa14.85□□□□□ -0.03
NEDD9-211ENST00000508546 ZRANB1Q9UGI0 708 aa14.85□□□□□ -0.03
NEDD9-211ENST00000508546 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.84□□□□□ -0.03
NEDD9-211ENST00000508546 ADGRB3O60242 1522 aa14.84□□□□□ -0.03
NEDD9-211ENST00000508546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.03
NEDD9-211ENST00000508546 LRP5O75197 1615 aa14.84□□□□□ -0.03
NEDD9-211ENST00000508546 ATAD2Q6PL18 1390 aa14.84□□□□□ -0.03
NEDD9-211ENST00000508546 NOS1P29475 1434 aa14.83□□□□□ -0.03
NEDD9-211ENST00000508546 DAPK1P53355 1430 aa14.83□□□□□ -0.03
NEDD9-211ENST00000508546 NUTM2BA6NNL0 878 aaPredicted RBP14.83□□□□□ -0.04
NEDD9-211ENST00000508546 NUTM2EB1AL46 878 aaPredicted RBP14.83□□□□□ -0.04
NEDD9-211ENST00000508546 NUTM2DQ5VT03 806 aaPredicted RBP14.83□□□□□ -0.04
NEDD9-211ENST00000508546 NUTM2AQ8IVF1 878 aaPredicted RBP14.83□□□□□ -0.04
NEDD9-211ENST00000508546 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
NEDD9-211ENST00000508546 NHSL1Q5SYE7 1610 aa14.81□□□□□ -0.04
NEDD9-211ENST00000508546 RBM6P78332 1123 aaKnown RBP14.8□□□□□ -0.04
NEDD9-211ENST00000508546 ASXL1Q8IXJ9 1541 aa14.79□□□□□ -0.04
NEDD9-211ENST00000508546 ANKRD30AQ9BXX3 1397 aa14.79□□□□□ -0.04
NEDD9-211ENST00000508546 SLC52A1Q9NWF4 448 aa14.79□□□□□ -0.04
NEDD9-211ENST00000508546 RPRD2Q5VT52 1461 aaKnown RBP14.77□□□□□ -0.04
NEDD9-211ENST00000508546 ZFYVE9O95405 1425 aa14.77□□□□□ -0.04
NEDD9-211ENST00000508546 GCC2Q8IWJ2 1684 aa14.77□□□□□ -0.05
NEDD9-211ENST00000508546 SETD5Q9C0A6 1442 aa14.76□□□□□ -0.05
NEDD9-211ENST00000508546 NCOA3Q9Y6Q9 1424 aa14.76□□□□□ -0.05
NEDD9-211ENST00000508546 PLEKHG1Q9ULL1 1385 aa14.76□□□□□ -0.05
NEDD9-211ENST00000508546 C8orf37Q96NL8 207 aa14.76□□□□□ -0.05
NEDD9-211ENST00000508546 TMEM131LA2VDJ0 1609 aa14.75□□□□□ -0.05
NEDD9-211ENST00000508546 QTRT2Q9H974 415 aaKnown RBP14.75□□□□□ -0.05
NEDD9-211ENST00000508546 ADGRL2O95490 1459 aa14.75□□□□□ -0.05
NEDD9-211ENST00000508546 FOXD1Q16676 465 aa14.74□□□□□ -0.05
NEDD9-211ENST00000508546 BRINP3Q76B58 766 aa14.74□□□□□ -0.05
NEDD9-211ENST00000508546 BCANQ96GW7 911 aa14.73□□□□□ -0.05
NEDD9-211ENST00000508546 CHIC2Q9UKJ5 165 aa14.73□□□□□ -0.05
NEDD9-211ENST00000508546 LOC105371045A0A1W2PR82 267 aa14.72□□□□□ -0.05
NEDD9-211ENST00000508546 HDGFP51858 240 aaKnown RBP14.72□□□□□ -0.05
NEDD9-211ENST00000508546 RIMS2Q9UQ26 1411 aa14.72□□□□□ -0.05
NEDD9-211ENST00000508546 PNPLA6Q8IY17 1366 aa14.72□□□□□ -0.05
NEDD9-211ENST00000508546 C14orf37Q86TY3 774 aa14.71□□□□□ -0.05
NEDD9-211ENST00000508546 CADPS2Q86UW7 1296 aa14.71□□□□□ -0.05
NEDD9-211ENST00000508546 TBX22Q9Y458 520 aa14.71□□□□□ -0.05
NEDD9-211ENST00000508546 APLP2Q06481 763 aa14.7□□□□□ -0.06
NEDD9-211ENST00000508546 PIK3R4Q99570 1358 aa14.69□□□□□ -0.06
NEDD9-211ENST00000508546 ANKRD50Q9ULJ7 1429 aa14.68□□□□□ -0.06
NEDD9-211ENST00000508546 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
NEDD9-211ENST00000508546 NGLY1Q96IV0 654 aa14.68□□□□□ -0.06
NEDD9-211ENST00000508546 DCCP43146 1447 aa14.67□□□□□ -0.06
NEDD9-211ENST00000508546 ADAMTS13Q76LX8 1427 aa14.67□□□□□ -0.06
NEDD9-211ENST00000508546 ATF3P18847 181 aa14.67□□□□□ -0.06
NEDD9-211ENST00000508546 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
NEDD9-211ENST00000508546 C19orf44Q9H6X5 657 aa14.67□□□□□ -0.06
NEDD9-211ENST00000508546 ATRNO75882 1429 aa14.66□□□□□ -0.06
NEDD9-211ENST00000508546 MST1RQ04912 1400 aa14.66□□□□□ -0.06
NEDD9-211ENST00000508546 E9PCH4 1651 aa14.66□□□□□ -0.06
NEDD9-211ENST00000508546 UNC13BO14795 1591 aa14.66□□□□□ -0.06
NEDD9-211ENST00000508546 TRPM2O94759 1503 aa14.65□□□□□ -0.06
NEDD9-211ENST00000508546 ADAMTS2O95450 1211 aa14.64□□□□□ -0.07
NEDD9-211ENST00000508546 XRN1Q8IZH2 1706 aaKnown RBP14.63□□□□□ -0.07
NEDD9-211ENST00000508546 DDX17Q92841 729 aaKnown RBP14.62□□□□□ -0.07
NEDD9-211ENST00000508546 BCL9LQ86UU0 1499 aa14.62□□□□□ -0.07
NEDD9-211ENST00000508546 BLMP54132 1417 aaPredicted RBP14.61□□□□□ -0.07
NEDD9-211ENST00000508546 PTPRUQ92729 1446 aa14.61□□□□□ -0.07
NEDD9-211ENST00000508546 CCDC125Q86Z20 511 aa14.61□□□□□ -0.07
NEDD9-211ENST00000508546 LRRC59Q96AG4 307 aaKnown RBP14.61□□□□□ -0.07
NEDD9-211ENST00000508546 USP21Q9UK80 565 aa14.61□□□□□ -0.07
NEDD9-211ENST00000508546 TRPC5Q9UL62 973 aaPredicted RBP14.61□□□□□ -0.07
NEDD9-211ENST00000508546 LAMC1P11047 1609 aa14.61□□□□□ -0.07
NEDD9-211ENST00000508546 IQGAP3Q86VI3 1631 aa14.61□□□□□ -0.07
NEDD9-211ENST00000508546 CHGAP10645 457 aaKnown RBP14.6□□□□□ -0.07
NEDD9-211ENST00000508546 NALCNQ8IZF0 1738 aa14.6□□□□□ -0.07
NEDD9-211ENST00000508546 COL22A1Q8NFW1 1626 aaPredicted RBP14.59□□□□□ -0.07
NEDD9-211ENST00000508546 BRWD3Q6RI45 1802 aa14.58□□□□□ -0.08
NEDD9-211ENST00000508546 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.08
NEDD9-211ENST00000508546 DEFB132Q7Z7B7 95 aa14.58□□□□□ -0.08
NEDD9-211ENST00000508546 AMOTL2Q9Y2J4 779 aa14.58□□□□□ -0.08
NEDD9-211ENST00000508546 NRXN3Q9Y4C0 1643 aa14.58□□□□□ -0.08
NEDD9-211ENST00000508546 PTCH1Q13635 1447 aa14.58□□□□□ -0.08
NEDD9-211ENST00000508546 SPHKAPQ2M3C7 1700 aa14.57□□□□□ -0.08
NEDD9-211ENST00000508546 MARF1Q9Y4F3 1742 aaKnown RBP14.57□□□□□ -0.08
NEDD9-211ENST00000508546 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.56□□□□□ -0.08
NEDD9-211ENST00000508546 FNBP4Q8N3X1 1017 aaPredicted RBP14.56□□□□□ -0.08
NEDD9-211ENST00000508546 GLI3P10071 1580 aa14.56□□□□□ -0.08
NEDD9-211ENST00000508546 ROCK1Q13464 1354 aa14.54□□□□□ -0.08
NEDD9-211ENST00000508546 MYOM2P54296 1465 aa14.54□□□□□ -0.08
NEDD9-211ENST00000508546 ADGRL3Q9HAR2 1447 aa14.53□□□□□ -0.08
NEDD9-211ENST00000508546 PSDA5PKW4 1024 aaPredicted RBP14.53□□□□□ -0.08
NEDD9-211ENST00000508546 HRCP23327 699 aa14.51□□□□□ -0.09
NEDD9-211ENST00000508546 C1orf167Q5SNV9 1468 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms