RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 COPS2P61201 443 aa3.8□□□□□ -1.8
SMN2-208ENST00000508258 GPIHBP1Q8IV16 184 aa3.8□□□□□ -1.8
SMN2-208ENST00000508258 TTC13Q8NBP0 860 aa3.8□□□□□ -1.8
SMN2-208ENST00000508258 EYA1Q99502 592 aa3.8□□□□□ -1.8
SMN2-208ENST00000508258 ADGRG1Q9Y653 693 aa3.8□□□□□ -1.8
SMN2-208ENST00000508258 APLP1P51693 650 aa3.79□□□□□ -1.8
SMN2-208ENST00000508258 HIC1Q14526 733 aa3.79□□□□□ -1.8
SMN2-208ENST00000508258 IFFO2Q5TF58 517 aa3.79□□□□□ -1.8
SMN2-208ENST00000508258 MTRQ99707 1265 aa3.79□□□□□ -1.8
SMN2-208ENST00000508258 SLC24A3Q9HC58 644 aa3.79□□□□□ -1.8
SMN2-208ENST00000508258 RCCD1A6NED2 376 aa3.78□□□□□ -1.8
SMN2-208ENST00000508258 GNPATO15228 680 aa3.78□□□□□ -1.8
SMN2-208ENST00000508258 OATP04181 439 aa3.78□□□□□ -1.8
SMN2-208ENST00000508258 FECHP22830 423 aa3.78□□□□□ -1.8
SMN2-208ENST00000508258 BARGINQ6ZT62 677 aa3.78□□□□□ -1.8
SMN2-208ENST00000508258 PRR14Q9BWN1 585 aa3.78□□□□□ -1.8
SMN2-208ENST00000508258 TMEM134Q9H6X4 195 aa3.78□□□□□ -1.8
SMN2-208ENST00000508258 IL21Q9HBE4 155 aa3.78□□□□□ -1.8
SMN2-208ENST00000508258 PCDHB3Q9Y5E6 796 aa3.78□□□□□ -1.8
SMN2-208ENST00000508258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.77□□□□□ -1.81
SMN2-208ENST00000508258 KMT5BQ4FZB7 885 aa3.77□□□□□ -1.81
SMN2-208ENST00000508258 ZNF516Q92618 1163 aa3.77□□□□□ -1.81
SMN2-208ENST00000508258 CFHP08603 1231 aa3.76□□□□□ -1.81
SMN2-208ENST00000508258 NEUROD2Q15784 382 aa3.76□□□□□ -1.81
SMN2-208ENST00000508258 TJAP1Q5JTD0 557 aa3.76□□□□□ -1.81
SMN2-208ENST00000508258 RSPH4AQ5TD94 716 aa3.76□□□□□ -1.81
SMN2-208ENST00000508258 METTL3Q86U44 580 aaKnown RBP3.76□□□□□ -1.81
SMN2-208ENST00000508258 RDH13Q8NBN7 331 aa3.76□□□□□ -1.81
SMN2-208ENST00000508258 PXYLP1Q8TE99 480 aa3.76□□□□□ -1.81
SMN2-208ENST00000508258 NLRP7Q8WX94 980 aa3.76□□□□□ -1.81
SMN2-208ENST00000508258 RGS20O76081 388 aa3.75□□□□□ -1.81
SMN2-208ENST00000508258 GGCXP38435 758 aa3.75□□□□□ -1.81
SMN2-208ENST00000508258 BLOC1S3Q6QNY0 202 aa3.75□□□□□ -1.81
SMN2-208ENST00000508258 NKX2-3Q8TAU0 364 aa3.75□□□□□ -1.81
SMN2-208ENST00000508258 DDX11L8A8MPP1 907 aa3.74□□□□□ -1.81
SMN2-208ENST00000508258 ZPR1O75312 459 aa3.74□□□□□ -1.81
SMN2-208ENST00000508258 PPP1R18Q6NYC8 613 aa3.74□□□□□ -1.81
SMN2-208ENST00000508258 IRX2Q9BZI1 471 aaPredicted RBP3.74□□□□□ -1.81
SMN2-208ENST00000508258 GPR37O15354 613 aa3.73□□□□□ -1.81
SMN2-208ENST00000508258 ACTN4O43707 911 aaKnown RBP3.73□□□□□ -1.81
SMN2-208ENST00000508258 TLL1O43897 1013 aa3.73□□□□□ -1.81
SMN2-208ENST00000508258 SLC10A3P09131 477 aa3.73□□□□□ -1.81
SMN2-208ENST00000508258 C14orf37Q86TY3 774 aa3.73□□□□□ -1.81
SMN2-208ENST00000508258 AK7Q96M32 723 aa3.73□□□□□ -1.81
SMN2-208ENST00000508258 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.73□□□□□ -1.81
SMN2-208ENST00000508258 NR1I2O75469 434 aa3.72□□□□□ -1.81
SMN2-208ENST00000508258 PUS10Q3MIT2 529 aaKnown RBP3.72□□□□□ -1.81
SMN2-208ENST00000508258 SULF1Q8IWU6 871 aa3.72□□□□□ -1.81
SMN2-208ENST00000508258 KRI1Q8N9T8 703 aaKnown RBP3.72□□□□□ -1.81
SMN2-208ENST00000508258 PRKD2Q9BZL6 878 aa3.72□□□□□ -1.81
SMN2-208ENST00000508258 DAXXQ9UER7 740 aaPredicted RBP3.72□□□□□ -1.81
SMN2-208ENST00000508258 MAP2K5Q13163 448 aa3.71□□□□□ -1.82
SMN2-208ENST00000508258 Q6ZNB5 142 aa3.71□□□□□ -1.82
SMN2-208ENST00000508258 PHOX2BQ99453 314 aa3.71□□□□□ -1.82
SMN2-208ENST00000508258 IRF6O14896 467 aa3.7□□□□□ -1.82
SMN2-208ENST00000508258 TRIM66O15016 1216 aa3.7□□□□□ -1.82
SMN2-208ENST00000508258 S1PR4O95977 384 aa3.7□□□□□ -1.82
SMN2-208ENST00000508258 MDM2Q00987 491 aaPredicted RBP3.7□□□□□ -1.82
SMN2-208ENST00000508258 FUT2Q10981 343 aa3.7□□□□□ -1.82
SMN2-208ENST00000508258 ARXQ96QS3 562 aa3.7□□□□□ -1.82
SMN2-208ENST00000508258 GPBP1L1Q9HC44 474 aaPredicted RBP3.7□□□□□ -1.82
SMN2-208ENST00000508258 PPEF1O14829 653 aaPredicted RBP3.69□□□□□ -1.82
SMN2-208ENST00000508258 PDE4DQ08499 809 aa3.69□□□□□ -1.82
SMN2-208ENST00000508258 CCDC102AQ96A19 550 aa3.69□□□□□ -1.82
SMN2-208ENST00000508258 MINK1Q8N4C8 1332 aaPredicted RBP3.69□□□□□ -1.82
SMN2-208ENST00000508258 RNF223E7ERA6 249 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 GFRA3O60609 400 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 ADH1BP00325 375 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 ATP6V1AP38606 617 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 GCGRP47871 477 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 GRIPAP1Q4V328 841 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 SCUBE3Q8IX30 993 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 SPSB2Q99619 263 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 TMUB1Q9BVT8 246 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 SLC6A16Q9GZN6 736 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 KDM4CQ9H3R0 1056 aa3.68□□□□□ -1.82
SMN2-208ENST00000508258 FMNL1O95466 1100 aaPredicted RBP3.67□□□□□ -1.82
SMN2-208ENST00000508258 CLCN1P35523 988 aa3.67□□□□□ -1.82
SMN2-208ENST00000508258 SLC19A1P41440 591 aa3.67□□□□□ -1.82
SMN2-208ENST00000508258 MORN1Q5T089 497 aa3.67□□□□□ -1.82
SMN2-208ENST00000508258 IL27Q8NEV9 243 aa3.67□□□□□ -1.82
SMN2-208ENST00000508258 PDZRN3Q9UPQ7 1066 aa3.67□□□□□ -1.82
SMN2-208ENST00000508258 SLC27A5Q9Y2P5 690 aa3.67□□□□□ -1.82
SMN2-208ENST00000508258 V9GY48 417 aaPredicted RBP3.67□□□□□ -1.82
SMN2-208ENST00000508258 KDM4AO75164 1064 aa3.66□□□□□ -1.82
SMN2-208ENST00000508258 TTLL12Q14166 644 aaPredicted RBP3.66□□□□□ -1.82
SMN2-208ENST00000508258 LAPTM4AQ15012 233 aa3.66□□□□□ -1.82
SMN2-208ENST00000508258 ANKLE1Q8NAG6 615 aa3.66□□□□□ -1.82
SMN2-208ENST00000508258 GPCPD1Q9NPB8 672 aa3.66□□□□□ -1.82
SMN2-208ENST00000508258 NRG2O14511 850 aaPredicted RBP3.65□□□□□ -1.83
SMN2-208ENST00000508258 CD46P15529 392 aa3.65□□□□□ -1.83
SMN2-208ENST00000508258 AMHR2Q16671 573 aa3.65□□□□□ -1.83
SMN2-208ENST00000508258 Q3C1V9 767 aa3.65□□□□□ -1.83
SMN2-208ENST00000508258 RNF19BQ6ZMZ0 732 aa3.65□□□□□ -1.83
SMN2-208ENST00000508258 NUTM1Q86Y26 1132 aa3.65□□□□□ -1.83
SMN2-208ENST00000508258 PRDM9Q9NQV7 894 aa3.65□□□□□ -1.83
SMN2-208ENST00000508258 PLEKHG3A1L390 1219 aa3.64□□□□□ -1.83
SMN2-208ENST00000508258 FOXC1Q12948 553 aa3.64□□□□□ -1.83
SMN2-208ENST00000508258 ZNF697Q5TEC3 545 aa3.64□□□□□ -1.83
SMN2-208ENST00000508258 HLA-CQ95604 372 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms