RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 NCAPD3P42695 1498 aa11.91□□□□□ -0.5
CCDC149-206ENST00000508236 FBXO31Q5XUX0 539 aaPredicted RBP11.9□□□□□ -0.5
CCDC149-206ENST00000508236 PPP2R2DQ66LE6 453 aa11.9□□□□□ -0.5
CCDC149-206ENST00000508236 PADI6Q6TGC4 694 aa11.9□□□□□ -0.5
CCDC149-206ENST00000508236 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
CCDC149-206ENST00000508236 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
CCDC149-206ENST00000508236 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
CCDC149-206ENST00000508236 CEP164Q9UPV0 1460 aa11.89□□□□□ -0.51
CCDC149-206ENST00000508236 WWC1Q8IX03 1113 aa11.89□□□□□ -0.51
CCDC149-206ENST00000508236 CERKQ8TCT0 537 aa11.89□□□□□ -0.51
CCDC149-206ENST00000508236 PPP1R15AO75807 674 aaPredicted RBP11.88□□□□□ -0.51
CCDC149-206ENST00000508236 GDPD2Q9HCC8 539 aa11.88□□□□□ -0.51
CCDC149-206ENST00000508236 LIMD1Q9UGP4 676 aa11.88□□□□□ -0.51
CCDC149-206ENST00000508236 IRF5Q13568 498 aa11.87□□□□□ -0.51
CCDC149-206ENST00000508236 MTMR14Q8NCE2 650 aa11.87□□□□□ -0.51
CCDC149-206ENST00000508236 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
CCDC149-206ENST00000508236 SEC24BO95487 1268 aa11.85□□□□□ -0.51
CCDC149-206ENST00000508236 TMCO4Q5TGY1 634 aa11.85□□□□□ -0.51
CCDC149-206ENST00000508236 CALR3Q96L12 384 aaKnown RBP11.85□□□□□ -0.51
CCDC149-206ENST00000508236 ACIN1Q9UKV3 1341 aaKnown RBP11.85□□□□□ -0.51
CCDC149-206ENST00000508236 PRDM2Q13029 1718 aa11.84□□□□□ -0.51
CCDC149-206ENST00000508236 TTC13Q8NBP0 860 aa11.84□□□□□ -0.51
CCDC149-206ENST00000508236 JPH4Q96JJ6 628 aa11.84□□□□□ -0.51
CCDC149-206ENST00000508236 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
CCDC149-206ENST00000508236 PRM3Q9NNZ6 103 aa11.83□□□□□ -0.52
CCDC149-206ENST00000508236 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
CCDC149-206ENST00000508236 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
CCDC149-206ENST00000508236 PDE4CQ08493 712 aa11.82□□□□□ -0.52
CCDC149-206ENST00000508236 TUSC1Q2TAM9 212 aa11.82□□□□□ -0.52
CCDC149-206ENST00000508236 C6orf132Q5T0Z8 1188 aa11.82□□□□□ -0.52
CCDC149-206ENST00000508236 RGS22Q8NE09 1264 aa11.82□□□□□ -0.52
CCDC149-206ENST00000508236 SPIRE2Q8WWL2 714 aa11.82□□□□□ -0.52
CCDC149-206ENST00000508236 SOCS7O14512 581 aa11.81□□□□□ -0.52
CCDC149-206ENST00000508236 ABL2P42684 1182 aa11.81□□□□□ -0.52
CCDC149-206ENST00000508236 C3orf67Q6ZVT6 689 aa11.8□□□□□ -0.52
CCDC149-206ENST00000508236 RBM46Q8TBY0 533 aaKnown RBP11.8□□□□□ -0.52
CCDC149-206ENST00000508236 GLMNQ92990 594 aa11.8□□□□□ -0.52
CCDC149-206ENST00000508236 PCDHGA4Q9Y5G9 962 aa11.8□□□□□ -0.52
CCDC149-206ENST00000508236 SPTLC1O15269 473 aa11.79□□□□□ -0.52
CCDC149-206ENST00000508236 POM121CA8CG34 1229 aa11.78□□□□□ -0.52
CCDC149-206ENST00000508236 FOSBP53539 338 aa11.78□□□□□ -0.52
CCDC149-206ENST00000508236 MTMR7Q9Y216 660 aa11.78□□□□□ -0.52
CCDC149-206ENST00000508236 MFAP1P55081 439 aaKnown RBP11.77□□□□□ -0.53
CCDC149-206ENST00000508236 TBC1D2BQ9UPU7 963 aa11.77□□□□□ -0.53
CCDC149-206ENST00000508236 CLIP1P30622 1438 aa11.77□□□□□ -0.53
CCDC149-206ENST00000508236 CFTRP13569 1480 aa11.76□□□□□ -0.53
CCDC149-206ENST00000508236 ERICH3Q5RHP9 1530 aa11.76□□□□□ -0.53
CCDC149-206ENST00000508236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.76□□□□□ -0.53
CCDC149-206ENST00000508236 PRSS12P56730 875 aa11.76□□□□□ -0.53
CCDC149-206ENST00000508236 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
CCDC149-206ENST00000508236 KDM4FA0A1W2PPD8 638 aa11.75□□□□□ -0.53
CCDC149-206ENST00000508236 CD46P15529 392 aa11.75□□□□□ -0.53
CCDC149-206ENST00000508236 CSPP1Q1MSJ5 1256 aa11.75□□□□□ -0.53
CCDC149-206ENST00000508236 ZDHHC16Q969W1 377 aa11.75□□□□□ -0.53
CCDC149-206ENST00000508236 NUTM1Q86Y26 1132 aa11.74□□□□□ -0.53
CCDC149-206ENST00000508236 RAPGEF2Q9Y4G8 1499 aa11.74□□□□□ -0.53
CCDC149-206ENST00000508236 CUX1P39880 1505 aa11.74□□□□□ -0.53
CCDC149-206ENST00000508236 PATL2C9JE40 543 aaKnown RBP11.73□□□□□ -0.53
CCDC149-206ENST00000508236 HAX1O00165 279 aa11.73□□□□□ -0.53
CCDC149-206ENST00000508236 AP1G2O75843 785 aa11.73□□□□□ -0.53
CCDC149-206ENST00000508236 EVX2Q03828 476 aa11.73□□□□□ -0.53
CCDC149-206ENST00000508236 CDCA7LQ96GN5 454 aa11.73□□□□□ -0.53
CCDC149-206ENST00000508236 VPS8Q8N3P4 1428 aa11.72□□□□□ -0.53
CCDC149-206ENST00000508236 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
CCDC149-206ENST00000508236 MOXD2PA6NHM9 499 aa11.72□□□□□ -0.53
CCDC149-206ENST00000508236 LILRB3O75022 631 aa11.72□□□□□ -0.53
CCDC149-206ENST00000508236 GJA5P36382 358 aa11.72□□□□□ -0.53
CCDC149-206ENST00000508236 QPCTQ16769 361 aa11.72□□□□□ -0.53
CCDC149-206ENST00000508236 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
CCDC149-206ENST00000508236 ZNF710Q8N1W2 664 aa11.71□□□□□ -0.53
CCDC149-206ENST00000508236 ZNF454Q8N9F8 522 aa11.71□□□□□ -0.53
CCDC149-206ENST00000508236 CCER1Q8TC90 406 aaPredicted RBP11.71□□□□□ -0.53
CCDC149-206ENST00000508236 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.53
CCDC149-206ENST00000508236 PRXQ9BXM0 1461 aa11.7□□□□□ -0.54
CCDC149-206ENST00000508236 POTEFA5A3E0 1075 aa11.69□□□□□ -0.54
CCDC149-206ENST00000508236 USP17L8P0C7I0 530 aa11.69□□□□□ -0.54
CCDC149-206ENST00000508236 NDUFV2P19404 249 aa11.69□□□□□ -0.54
CCDC149-206ENST00000508236 RTL5Q5HYW3 569 aaPredicted RBP11.69□□□□□ -0.54
CCDC149-206ENST00000508236 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
CCDC149-206ENST00000508236 HDGFL1Q5TGJ6 251 aa11.68□□□□□ -0.54
CCDC149-206ENST00000508236 SLC39A7Q92504 469 aa11.68□□□□□ -0.54
CCDC149-206ENST00000508236 EYA1Q99502 592 aa11.68□□□□□ -0.54
CCDC149-206ENST00000508236 ADAM33Q9BZ11 813 aa11.68□□□□□ -0.54
CCDC149-206ENST00000508236 PCDHB15Q9Y5E8 787 aa11.68□□□□□ -0.54
CCDC149-206ENST00000508236 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
CCDC149-206ENST00000508236 DDX11L8A8MPP1 907 aa11.67□□□□□ -0.54
CCDC149-206ENST00000508236 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
CCDC149-206ENST00000508236 NUTM2DQ5VT03 806 aaPredicted RBP11.67□□□□□ -0.54
CCDC149-206ENST00000508236 FOXD4L5Q5VV16 416 aaPredicted RBP11.67□□□□□ -0.54
CCDC149-206ENST00000508236 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
CCDC149-206ENST00000508236 FOXD4L4Q8WXT5 416 aaPredicted RBP11.67□□□□□ -0.54
CCDC149-206ENST00000508236 NDUFB9Q9Y6M9 179 aa11.67□□□□□ -0.54
CCDC149-206ENST00000508236 BRD1O95696 1058 aa11.66□□□□□ -0.54
CCDC149-206ENST00000508236 KCNA1Q09470 495 aa11.66□□□□□ -0.54
CCDC149-206ENST00000508236 USTQ9Y2C2 406 aa11.66□□□□□ -0.54
CCDC149-206ENST00000508236 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
CCDC149-206ENST00000508236 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.64□□□□□ -0.55
CCDC149-206ENST00000508236 CENPBP07199 599 aaPredicted RBP11.64□□□□□ -0.55
CCDC149-206ENST00000508236 CSB-PGBD3P0DP91 1061 aa11.64□□□□□ -0.55
CCDC149-206ENST00000508236 RFX1P22670 979 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms