RNA–Protein interactions for RNA: ENST00000508126.1

SPSB4-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 2

Gene SPSB4, Length 1,752 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-203ENST00000508126 FER1L4A9Z1Z3 1794 aa22.77■■□□□ 1.24
SPSB4-203ENST00000508126 NEXMIFQ5QGS0 1516 aa22.76■■□□□ 1.23
SPSB4-203ENST00000508126 ADGRF5Q8IZF2 1346 aa22.75■■□□□ 1.23
SPSB4-203ENST00000508126 STAG3Q9UJ98 1225 aa22.74■■□□□ 1.23
SPSB4-203ENST00000508126 TNRQ92752 1358 aa22.74■■□□□ 1.23
SPSB4-203ENST00000508126 VGFO15240 615 aaPredicted RBP22.72■■□□□ 1.23
SPSB4-203ENST00000508126 PIK3C2GO75747 1445 aa22.72■■□□□ 1.23
SPSB4-203ENST00000508126 DDX10Q13206 875 aaKnown RBP22.71■■□□□ 1.23
SPSB4-203ENST00000508126 WASHC2AQ641Q2 1341 aa22.71■■□□□ 1.23
SPSB4-203ENST00000508126 MYO5BQ9ULV0 1848 aa22.71■■□□□ 1.23
SPSB4-203ENST00000508126 ZFYVE9O95405 1425 aa22.71■■□□□ 1.23
SPSB4-203ENST00000508126 POLR1AO95602 1720 aaPredicted RBP22.7■■□□□ 1.22
SPSB4-203ENST00000508126 CCDC7Q96M83 1385 aa22.69■■□□□ 1.22
SPSB4-203ENST00000508126 ST20-MTHFSA0A0A6YYL1 179 aa22.69■■□□□ 1.22
SPSB4-203ENST00000508126 A2ML1A8K2U0 1454 aa22.68■■□□□ 1.22
SPSB4-203ENST00000508126 C3P01024 1663 aa22.68■■□□□ 1.22
SPSB4-203ENST00000508126 SCAF11Q99590 1463 aaKnown RBP22.68■■□□□ 1.22
SPSB4-203ENST00000508126 CFAP70Q5T0N1 1121 aa22.67■■□□□ 1.22
SPSB4-203ENST00000508126 IQGAP1P46940 1657 aa22.67■■□□□ 1.22
SPSB4-203ENST00000508126 SETBP1Q9Y6X0 1596 aa22.65■■□□□ 1.22
SPSB4-203ENST00000508126 NLRP1Q9C000 1473 aa22.65■■□□□ 1.22
SPSB4-203ENST00000508126 C11orf95C9JLR9 678 aaPredicted RBP22.65■■□□□ 1.22
SPSB4-203ENST00000508126 KIF7Q2M1P5 1343 aa22.64■■□□□ 1.22
SPSB4-203ENST00000508126 KDM5AP29375 1690 aaKnown RBP22.64■■□□□ 1.22
SPSB4-203ENST00000508126 EIF3AQ14152 1382 aaKnown RBP22.64■■□□□ 1.21
SPSB4-203ENST00000508126 C14orf93Q9H972 538 aaKnown RBP22.63■■□□□ 1.21
SPSB4-203ENST00000508126 CEBPAP49715 358 aaPredicted RBP22.63■■□□□ 1.21
SPSB4-203ENST00000508126 NUTM2DQ5VT03 806 aaPredicted RBP22.62■■□□□ 1.21
SPSB4-203ENST00000508126 MIER1Q8N108 512 aa22.61■■□□□ 1.21
SPSB4-203ENST00000508126 RIMS2Q9UQ26 1411 aa22.6■■□□□ 1.21
SPSB4-203ENST00000508126 RIMS1Q86UR5 1692 aaKnown RBP22.6■■□□□ 1.21
SPSB4-203ENST00000508126 ADAMTSL3P82987 1691 aa22.59■■□□□ 1.21
SPSB4-203ENST00000508126 ADGRB1O14514 1584 aa22.58■■□□□ 1.21
SPSB4-203ENST00000508126 UBR1Q8IWV7 1749 aa22.57■■□□□ 1.2
SPSB4-203ENST00000508126 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.57■■□□□ 1.2
SPSB4-203ENST00000508126 HDGFP51858 240 aaKnown RBP22.55■■□□□ 1.2
SPSB4-203ENST00000508126 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
SPSB4-203ENST00000508126 TESK2Q96S53 571 aa22.55■■□□□ 1.2
SPSB4-203ENST00000508126 TMEM2Q9UHN6 1383 aa22.53■■□□□ 1.2
SPSB4-203ENST00000508126 TMF1P82094 1093 aa22.53■■□□□ 1.2
SPSB4-203ENST00000508126 POLR3GLQ9BT43 218 aa22.53■■□□□ 1.2
SPSB4-203ENST00000508126 MYO3AQ8NEV4 1616 aa22.52■■□□□ 1.19
SPSB4-203ENST00000508126 SLC24A1O60721 1099 aa22.5■■□□□ 1.19
SPSB4-203ENST00000508126 TMEM132EQ6IEE7 984 aa22.5■■□□□ 1.19
SPSB4-203ENST00000508126 ALKQ9UM73 1620 aa22.49■■□□□ 1.19
SPSB4-203ENST00000508126 DISP3Q9P2K9 1392 aa22.49■■□□□ 1.19
SPSB4-203ENST00000508126 ANP32CO43423 234 aa22.48■■□□□ 1.19
SPSB4-203ENST00000508126 ASXL1Q8IXJ9 1541 aa22.48■■□□□ 1.19
SPSB4-203ENST00000508126 TRAK1Q9UPV9 953 aa22.47■■□□□ 1.19
SPSB4-203ENST00000508126 CENPJQ9HC77 1338 aaPredicted RBP22.46■■□□□ 1.19
SPSB4-203ENST00000508126 SBNO2Q9Y2G9 1366 aa22.46■■□□□ 1.19
SPSB4-203ENST00000508126 CDCA8Q53HL2 280 aa22.45■■□□□ 1.19
SPSB4-203ENST00000508126 SLIT1O75093 1534 aa22.44■■□□□ 1.18
SPSB4-203ENST00000508126 THEMISQ8N1K5 641 aaPredicted RBP22.44■■□□□ 1.18
SPSB4-203ENST00000508126 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
SPSB4-203ENST00000508126 CEP170BQ9Y4F5 1589 aaPredicted RBP22.44■■□□□ 1.18
SPSB4-203ENST00000508126 ARHGAP23Q9P227 1491 aa22.43■■□□□ 1.18
SPSB4-203ENST00000508126 ARHGEF28Q8N1W1 1705 aaKnown RBP22.43■■□□□ 1.18
SPSB4-203ENST00000508126 NRXN3Q9Y4C0 1643 aa22.43■■□□□ 1.18
SPSB4-203ENST00000508126 EID1Q9Y6B2 187 aa22.42■■□□□ 1.18
SPSB4-203ENST00000508126 YTHDC2Q9H6S0 1430 aaKnown RBP22.42■■□□□ 1.18
SPSB4-203ENST00000508126 SETD1AO15047 1707 aaKnown RBP22.41■■□□□ 1.18
SPSB4-203ENST00000508126 PTPRMP28827 1452 aa22.41■■□□□ 1.18
SPSB4-203ENST00000508126 QRICH2Q9H0J4 1663 aa22.41■■□□□ 1.18
SPSB4-203ENST00000508126 PLEKHG1Q9ULL1 1385 aa22.4■■□□□ 1.18
SPSB4-203ENST00000508126 ZNF142P52746 1687 aaPredicted RBP22.39■■□□□ 1.17
SPSB4-203ENST00000508126 TXNDC2Q86VQ3 553 aa22.38■■□□□ 1.17
SPSB4-203ENST00000508126 BCANQ96GW7 911 aa22.38■■□□□ 1.17
SPSB4-203ENST00000508126 STK26Q9P289 416 aa22.38■■□□□ 1.17
SPSB4-203ENST00000508126 SETD1BQ9UPS6 1966 aaKnown RBP22.37■■□□□ 1.17
SPSB4-203ENST00000508126 LTKP29376 864 aa22.36■■□□□ 1.17
SPSB4-203ENST00000508126 LRPPRCP42704 1394 aaKnown RBP22.36■■□□□ 1.17
SPSB4-203ENST00000508126 DLC1Q96QB1 1528 aa22.35■■□□□ 1.17
SPSB4-203ENST00000508126 CCER2I3L3R5 266 aa22.33■■□□□ 1.16
SPSB4-203ENST00000508126 ADAMTS13Q76LX8 1427 aa22.32■■□□□ 1.16
SPSB4-203ENST00000508126 METP08581 1390 aa22.31■■□□□ 1.16
SPSB4-203ENST00000508126 ABCC11Q96J66 1382 aa22.31■■□□□ 1.16
SPSB4-203ENST00000508126 POGKQ9P215 609 aa22.3■■□□□ 1.16
SPSB4-203ENST00000508126 PRAM1Q96QH2 718 aa22.3■■□□□ 1.16
SPSB4-203ENST00000508126 PRKRIP1Q9H875 184 aaPredicted RBP22.29■■□□□ 1.16
SPSB4-203ENST00000508126 EVC2Q86UK5 1308 aa22.28■■□□□ 1.16
SPSB4-203ENST00000508126 DIP2AQ14689 1571 aa22.28■■□□□ 1.16
SPSB4-203ENST00000508126 MED14O60244 1454 aa22.28■■□□□ 1.16
SPSB4-203ENST00000508126 KNDC1Q76NI1 1749 aa22.28■■□□□ 1.16
SPSB4-203ENST00000508126 TECPR2O15040 1411 aa22.28■■□□□ 1.16
SPSB4-203ENST00000508126 MYOM1P52179 1685 aa22.27■■□□□ 1.16
SPSB4-203ENST00000508126 SAFB2Q14151 953 aaKnown RBP eCLIP22.27■■□□□ 1.16
SPSB4-203ENST00000508126 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
SPSB4-203ENST00000508126 PUS7Q96PZ0 661 aaKnown RBP22.25■■□□□ 1.15
SPSB4-203ENST00000508126 PANK3Q9H999 370 aa22.25■■□□□ 1.15
SPSB4-203ENST00000508126 CPS1P31327 1500 aa22.24■■□□□ 1.15
SPSB4-203ENST00000508126 ANKLE2Q86XL3 938 aa22.24■■□□□ 1.15
SPSB4-203ENST00000508126 TBX22Q9Y458 520 aa22.24■■□□□ 1.15
SPSB4-203ENST00000508126 FAM135BQ49AJ0 1406 aa22.24■■□□□ 1.15
SPSB4-203ENST00000508126 SLC26A8Q96RN1 970 aa22.23■■□□□ 1.15
SPSB4-203ENST00000508126 SIRT1Q96EB6 747 aa22.22■■□□□ 1.15
SPSB4-203ENST00000508126 KTN1Q86UP2 1357 aaKnown RBP22.22■■□□□ 1.15
SPSB4-203ENST00000508126 MINK1Q8N4C8 1332 aaPredicted RBP22.22■■□□□ 1.15
SPSB4-203ENST00000508126 PER1O15534 1290 aaPredicted RBP22.21■■□□□ 1.15
SPSB4-203ENST00000508126 WAPLQ7Z5K2 1190 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms