RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 KIF14Q15058 1648 aa10.44□□□□□ -0.74
CLCN3-206ENST00000507875 MAGI3Q5TCQ9 1506 aa10.44□□□□□ -0.74
CLCN3-206ENST00000507875 TMCO4Q5TGY1 634 aa10.44□□□□□ -0.74
CLCN3-206ENST00000507875 ATP1B4Q9UN42 357 aaPredicted RBP10.43□□□□□ -0.74
CLCN3-206ENST00000507875 NCOA2Q15596 1464 aa10.43□□□□□ -0.74
CLCN3-206ENST00000507875 NUTM2FA1L443 756 aa10.43□□□□□ -0.74
CLCN3-206ENST00000507875 MAP2K5Q13163 448 aa10.43□□□□□ -0.74
CLCN3-206ENST00000507875 KIF13AQ9H1H9 1805 aa10.43□□□□□ -0.74
CLCN3-206ENST00000507875 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
CLCN3-206ENST00000507875 DIP2BQ9P265 1576 aa10.42□□□□□ -0.74
CLCN3-206ENST00000507875 MINK1Q8N4C8 1332 aaPredicted RBP10.42□□□□□ -0.74
CLCN3-206ENST00000507875 GRXCR2A6NFK2 248 aa10.42□□□□□ -0.74
CLCN3-206ENST00000507875 SOX12O15370 315 aa10.42□□□□□ -0.74
CLCN3-206ENST00000507875 PPARGC1BQ86YN6 1023 aaKnown RBP10.42□□□□□ -0.74
CLCN3-206ENST00000507875 ZNF579Q8NAF0 562 aaKnown RBP10.42□□□□□ -0.74
CLCN3-206ENST00000507875 PPP1R15BQ5SWA1 713 aa10.41□□□□□ -0.74
CLCN3-206ENST00000507875 REM2Q8IYK8 340 aaPredicted RBP10.41□□□□□ -0.74
CLCN3-206ENST00000507875 MYOM3Q5VTT5 1437 aa10.41□□□□□ -0.74
CLCN3-206ENST00000507875 ASXL2Q76L83 1435 aa10.41□□□□□ -0.74
CLCN3-206ENST00000507875 GIGYF2Q6Y7W6 1299 aaKnown RBP10.41□□□□□ -0.74
CLCN3-206ENST00000507875 MAP3K13O43283 966 aa10.4□□□□□ -0.74
CLCN3-206ENST00000507875 TCOF1Q13428 1488 aaKnown RBP10.4□□□□□ -0.74
CLCN3-206ENST00000507875 PDIA6Q15084 440 aa10.4□□□□□ -0.75
CLCN3-206ENST00000507875 PLEKHD1A6NEE1 506 aa10.39□□□□□ -0.75
CLCN3-206ENST00000507875 CCNB3Q8WWL7 1395 aa10.39□□□□□ -0.75
CLCN3-206ENST00000507875 CARNS1A5YM72 827 aa10.39□□□□□ -0.75
CLCN3-206ENST00000507875 PROCA1Q8NCQ7 364 aaPredicted RBP10.39□□□□□ -0.75
CLCN3-206ENST00000507875 CCDC97Q96F63 343 aaPredicted RBP10.39□□□□□ -0.75
CLCN3-206ENST00000507875 CDC42BPAQ5VT25 1732 aa10.38□□□□□ -0.75
CLCN3-206ENST00000507875 CHMP4AQ9BY43 222 aa10.38□□□□□ -0.75
CLCN3-206ENST00000507875 FGD6Q6ZV73 1430 aa10.38□□□□□ -0.75
CLCN3-206ENST00000507875 PTPN23Q9H3S7 1636 aa10.38□□□□□ -0.75
CLCN3-206ENST00000507875 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
CLCN3-206ENST00000507875 OXER1Q8TDS5 423 aa10.37□□□□□ -0.75
CLCN3-206ENST00000507875 GOPCQ9HD26 462 aa10.37□□□□□ -0.75
CLCN3-206ENST00000507875 PLSCR2Q9NRY7 297 aa10.37□□□□□ -0.75
CLCN3-206ENST00000507875 PREX2Q70Z35 1606 aa10.37□□□□□ -0.75
CLCN3-206ENST00000507875 ARAP3Q8WWN8 1544 aa10.37□□□□□ -0.75
CLCN3-206ENST00000507875 PHLDB1Q86UU1 1377 aa10.37□□□□□ -0.75
CLCN3-206ENST00000507875 FBXO31Q5XUX0 539 aaPredicted RBP10.36□□□□□ -0.75
CLCN3-206ENST00000507875 GLI2P10070 1586 aa10.35□□□□□ -0.75
CLCN3-206ENST00000507875 ZEB1P37275 1124 aaPredicted RBP10.35□□□□□ -0.75
CLCN3-206ENST00000507875 DSG2Q14126 1118 aa10.35□□□□□ -0.75
CLCN3-206ENST00000507875 PCMTD1Q96MG8 357 aaPredicted RBP10.35□□□□□ -0.75
CLCN3-206ENST00000507875 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
CLCN3-206ENST00000507875 PRIM1P49642 420 aaKnown RBP10.34□□□□□ -0.75
CLCN3-206ENST00000507875 WDR7Q9Y4E6 1490 aa10.34□□□□□ -0.75
CLCN3-206ENST00000507875 ABCA9Q8IUA7 1624 aa10.34□□□□□ -0.75
CLCN3-206ENST00000507875 SERPINA10Q9UK55 444 aa10.33□□□□□ -0.76
CLCN3-206ENST00000507875 CDC42BPBQ9Y5S2 1711 aa10.33□□□□□ -0.76
CLCN3-206ENST00000507875 GNPATO15228 680 aa10.33□□□□□ -0.76
CLCN3-206ENST00000507875 DHX37Q8IY37 1157 aaKnown RBP10.33□□□□□ -0.76
CLCN3-206ENST00000507875 KDM6BO15054 1643 aa10.33□□□□□ -0.76
CLCN3-206ENST00000507875 COG6Q9Y2V7 657 aa10.32□□□□□ -0.76
CLCN3-206ENST00000507875 TEX14Q8IWB6 1497 aa10.32□□□□□ -0.76
CLCN3-206ENST00000507875 ACIN1Q9UKV3 1341 aaKnown RBP10.32□□□□□ -0.76
CLCN3-206ENST00000507875 GPATCH8Q9UKJ3 1502 aaKnown RBP10.32□□□□□ -0.76
CLCN3-206ENST00000507875 DNMT1P26358 1616 aaKnown RBP10.32□□□□□ -0.76
CLCN3-206ENST00000507875 CROCC2H7BZ55 1655 aa10.32□□□□□ -0.76
CLCN3-206ENST00000507875 TSPOAP1O95153 1857 aa10.32□□□□□ -0.76
CLCN3-206ENST00000507875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLCN3-206ENST00000507875 SNRKQ9NRH2 765 aa10.31□□□□□ -0.76
CLCN3-206ENST00000507875 ADGBQ8N7X0 1667 aa10.31□□□□□ -0.76
CLCN3-206ENST00000507875 CFAP74Q9C0B2 1584 aa10.31□□□□□ -0.76
CLCN3-206ENST00000507875 AKT1S1Q96B36 256 aa10.31□□□□□ -0.76
CLCN3-206ENST00000507875 POLR3EQ9NVU0 708 aa10.31□□□□□ -0.76
CLCN3-206ENST00000507875 ARHGEF5Q12774 1597 aa10.3□□□□□ -0.76
CLCN3-206ENST00000507875 PLEKHH2Q8IVE3 1493 aa10.3□□□□□ -0.76
CLCN3-206ENST00000507875 FBXW7Q969H0 707 aa10.3□□□□□ -0.76
CLCN3-206ENST00000507875 KCNH8Q96L42 1107 aa10.3□□□□□ -0.76
CLCN3-206ENST00000507875 GPHNQ9NQX3 736 aaPredicted RBP10.3□□□□□ -0.76
CLCN3-206ENST00000507875 AKNAQ7Z591 1439 aa10.3□□□□□ -0.76
CLCN3-206ENST00000507875 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
CLCN3-206ENST00000507875 PHOX2BQ99453 314 aa10.3□□□□□ -0.76
CLCN3-206ENST00000507875 OSBPP22059 807 aa10.29□□□□□ -0.76
CLCN3-206ENST00000507875 TTC37Q6PGP7 1564 aa10.29□□□□□ -0.76
CLCN3-206ENST00000507875 GCC2Q8IWJ2 1684 aa10.29□□□□□ -0.76
CLCN3-206ENST00000507875 FARP1Q9Y4F1 1045 aaPredicted RBP10.28□□□□□ -0.76
CLCN3-206ENST00000507875 MAP3K4Q9Y6R4 1608 aa10.28□□□□□ -0.76
CLCN3-206ENST00000507875 CAMSAP2Q08AD1 1489 aa10.27□□□□□ -0.76
CLCN3-206ENST00000507875 CD109Q6YHK3 1445 aa10.27□□□□□ -0.77
CLCN3-206ENST00000507875 SHANK2Q9UPX8 1470 aa10.27□□□□□ -0.77
CLCN3-206ENST00000507875 UBE2Q2Q8WVN8 375 aa10.27□□□□□ -0.77
CLCN3-206ENST00000507875 DDX12PQ92771 950 aa10.27□□□□□ -0.77
CLCN3-206ENST00000507875 PLCH2O75038 1416 aa10.26□□□□□ -0.77
CLCN3-206ENST00000507875 RSPH4AQ5TD94 716 aa10.26□□□□□ -0.77
CLCN3-206ENST00000507875 KIF12Q96FN5 646 aa10.26□□□□□ -0.77
CLCN3-206ENST00000507875 MAST1Q9Y2H9 1570 aa10.26□□□□□ -0.77
CLCN3-206ENST00000507875 SH3D19Q5HYK7 790 aa10.26□□□□□ -0.77
CLCN3-206ENST00000507875 ZNF330Q9Y3S2 320 aaPredicted RBP10.25□□□□□ -0.77
CLCN3-206ENST00000507875 ROCK1Q13464 1354 aa10.25□□□□□ -0.77
CLCN3-206ENST00000507875 KIAA1107Q9UPP5 1409 aa10.25□□□□□ -0.77
CLCN3-206ENST00000507875 SAMD9LQ8IVG5 1584 aa10.25□□□□□ -0.77
CLCN3-206ENST00000507875 TRPC6Q9Y210 931 aa10.25□□□□□ -0.77
CLCN3-206ENST00000507875 PPRC1Q5VV67 1664 aaKnown RBP10.24□□□□□ -0.77
CLCN3-206ENST00000507875 CFDP1Q9UEE9 299 aaPredicted RBP10.24□□□□□ -0.77
CLCN3-206ENST00000507875 ARHGAP5Q13017 1502 aa10.24□□□□□ -0.77
CLCN3-206ENST00000507875 POM121CA8CG34 1229 aa10.24□□□□□ -0.77
CLCN3-206ENST00000507875 ADGRL2O95490 1459 aa10.23□□□□□ -0.77
CLCN3-206ENST00000507875 DAPK1P53355 1430 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms