RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 TATDN2Q93075 761 aa8.86□□□□□ -0.99
AC008539.1-201ENST00000507653 CDCA7LQ96GN5 454 aa8.86□□□□□ -0.99
AC008539.1-201ENST00000507653 TLL1O43897 1013 aa8.85□□□□□ -0.99
AC008539.1-201ENST00000507653 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
AC008539.1-201ENST00000507653 CTC1Q2NKJ3 1217 aa8.84□□□□□ -0.99
AC008539.1-201ENST00000507653 PLA2G2CQ5R387 149 aa8.84□□□□□ -0.99
AC008539.1-201ENST00000507653 DNAJC5Q9H3Z4 198 aa8.84□□□□□ -0.99
AC008539.1-201ENST00000507653 PNMA3Q9UL41 463 aa8.84□□□□□ -0.99
AC008539.1-201ENST00000507653 S1PR4O95977 384 aa8.83□□□□□ -1
AC008539.1-201ENST00000507653 NBPF26B4DH59 902 aa8.82□□□□□ -1
AC008539.1-201ENST00000507653 PRSS12P56730 875 aa8.82□□□□□ -1
AC008539.1-201ENST00000507653 EN1Q05925 392 aaPredicted RBP8.82□□□□□ -1
AC008539.1-201ENST00000507653 FOXC1Q12948 553 aa8.82□□□□□ -1
AC008539.1-201ENST00000507653 LMOD2Q6P5Q4 547 aa8.82□□□□□ -1
AC008539.1-201ENST00000507653 TOR4AQ9NXH8 423 aa8.82□□□□□ -1
AC008539.1-201ENST00000507653 BLOC1S3Q6QNY0 202 aa8.81□□□□□ -1
AC008539.1-201ENST00000507653 NECTIN2Q92692 538 aa8.81□□□□□ -1
AC008539.1-201ENST00000507653 DCAF8L2P0C7V8 631 aa8.8□□□□□ -1
AC008539.1-201ENST00000507653 NKX1-1Q15270 411 aaPredicted RBP8.8□□□□□ -1
AC008539.1-201ENST00000507653 DDX12PQ92771 950 aa8.8□□□□□ -1
AC008539.1-201ENST00000507653 GMPRP36959 345 aa8.79□□□□□ -1
AC008539.1-201ENST00000507653 PCDHB3Q9Y5E6 796 aa8.79□□□□□ -1
AC008539.1-201ENST00000507653 MAP3K7O43318 606 aa8.78□□□□□ -1
AC008539.1-201ENST00000507653 HDGFP51858 240 aaKnown RBP8.78□□□□□ -1
AC008539.1-201ENST00000507653 SWT1Q5T5J6 900 aaKnown RBP8.77□□□□□ -1.01
AC008539.1-201ENST00000507653 KCTD17Q8N5Z5 321 aa8.77□□□□□ -1.01
AC008539.1-201ENST00000507653 TRIM47Q96LD4 638 aa8.77□□□□□ -1.01
AC008539.1-201ENST00000507653 NUDT18Q6ZVK8 323 aa8.76□□□□□ -1.01
AC008539.1-201ENST00000507653 ATP13A2Q9NQ11 1180 aa8.76□□□□□ -1.01
AC008539.1-201ENST00000507653 SLF2Q8IX21 1173 aa8.75□□□□□ -1.01
AC008539.1-201ENST00000507653 NBR1Q14596 966 aa8.74□□□□□ -1.01
AC008539.1-201ENST00000507653 GSK3AP49840 483 aa8.73□□□□□ -1.01
AC008539.1-201ENST00000507653 DPYSL4O14531 572 aa8.72□□□□□ -1.01
AC008539.1-201ENST00000507653 KRTAP4-8Q9BYQ9 185 aa8.72□□□□□ -1.01
AC008539.1-201ENST00000507653 CYP4X1Q8N118 509 aa8.71□□□□□ -1.02
AC008539.1-201ENST00000507653 XP32Q5T750 250 aa8.7□□□□□ -1.02
AC008539.1-201ENST00000507653 SLC16A10Q8TF71 515 aa8.7□□□□□ -1.02
AC008539.1-201ENST00000507653 PRR14Q9BWN1 585 aa8.7□□□□□ -1.02
AC008539.1-201ENST00000507653 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
AC008539.1-201ENST00000507653 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
AC008539.1-201ENST00000507653 KCNMA1Q12791 1236 aa8.68□□□□□ -1.02
AC008539.1-201ENST00000507653 ADH1BP00325 375 aa8.67□□□□□ -1.02
AC008539.1-201ENST00000507653 CAMK2BQ13554 666 aa8.67□□□□□ -1.02
AC008539.1-201ENST00000507653 PRIM1P49642 420 aaKnown RBP8.66□□□□□ -1.02
AC008539.1-201ENST00000507653 NXF1Q9UBU9 619 aaKnown RBP8.66□□□□□ -1.02
AC008539.1-201ENST00000507653 BBXQ8WY36 941 aaPredicted RBP8.65□□□□□ -1.02
AC008539.1-201ENST00000507653 IRF7Q92985 503 aa8.65□□□□□ -1.02
AC008539.1-201ENST00000507653 SLC6A16Q9GZN6 736 aa8.64□□□□□ -1.03
AC008539.1-201ENST00000507653 KIFC2Q96AC6 838 aa8.63□□□□□ -1.03
AC008539.1-201ENST00000507653 ERBB4Q15303 1308 aa8.62□□□□□ -1.03
AC008539.1-201ENST00000507653 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
AC008539.1-201ENST00000507653 SMPD1P17405 629 aa8.62□□□□□ -1.03
AC008539.1-201ENST00000507653 RPIAP49247 311 aa8.62□□□□□ -1.03
AC008539.1-201ENST00000507653 RBM27Q9P2N5 1060 aaKnown RBP8.62□□□□□ -1.03
AC008539.1-201ENST00000507653 GTPBP6O43824 516 aaPredicted RBP8.6□□□□□ -1.03
AC008539.1-201ENST00000507653 TTC24A2A3L6 582 aaPredicted RBP8.59□□□□□ -1.03
AC008539.1-201ENST00000507653 NPAS3Q8IXF0 933 aa8.59□□□□□ -1.03
AC008539.1-201ENST00000507653 TTC13Q8NBP0 860 aa8.59□□□□□ -1.03
AC008539.1-201ENST00000507653 KRTAP9-2Q9BYQ4 174 aa8.59□□□□□ -1.03
AC008539.1-201ENST00000507653 CDHR5Q9HBB8 845 aa8.59□□□□□ -1.03
AC008539.1-201ENST00000507653 H3BM21 787 aa8.58□□□□□ -1.04
AC008539.1-201ENST00000507653 SLC4A3P48751 1232 aa8.58□□□□□ -1.04
AC008539.1-201ENST00000507653 VEGFBP49765 207 aa8.58□□□□□ -1.04
AC008539.1-201ENST00000507653 ACTN4O43707 911 aaKnown RBP8.57□□□□□ -1.04
AC008539.1-201ENST00000507653 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.56□□□□□ -1.04
AC008539.1-201ENST00000507653 KRTAP9-6A0A140TA67 174 aa8.55□□□□□ -1.04
AC008539.1-201ENST00000507653 CD2BP2O95400 341 aaKnown RBP8.55□□□□□ -1.04
AC008539.1-201ENST00000507653 CADPS2Q86UW7 1296 aa8.55□□□□□ -1.04
AC008539.1-201ENST00000507653 TMEM151AQ8N4L1 468 aa8.55□□□□□ -1.04
AC008539.1-201ENST00000507653 PDIA6Q15084 440 aa8.54□□□□□ -1.04
AC008539.1-201ENST00000507653 EYA1Q99502 592 aa8.54□□□□□ -1.04
AC008539.1-201ENST00000507653 GDF11O95390 407 aa8.52□□□□□ -1.05
AC008539.1-201ENST00000507653 RASSF7Q02833 373 aa8.52□□□□□ -1.05
AC008539.1-201ENST00000507653 PADI6Q6TGC4 694 aa8.52□□□□□ -1.05
AC008539.1-201ENST00000507653 J3QL48 77 aa8.51□□□□□ -1.05
AC008539.1-201ENST00000507653 NR1I2O75469 434 aa8.51□□□□□ -1.05
AC008539.1-201ENST00000507653 SNIP1Q8TAD8 396 aaKnown RBP8.51□□□□□ -1.05
AC008539.1-201ENST00000507653 HPS1Q92902 700 aa8.51□□□□□ -1.05
AC008539.1-201ENST00000507653 KMT5BQ4FZB7 885 aa8.5□□□□□ -1.05
AC008539.1-201ENST00000507653 FCF1Q9Y324 198 aaKnown RBP8.5□□□□□ -1.05
AC008539.1-201ENST00000507653 SPRYD3Q8NCJ5 442 aa8.49□□□□□ -1.05
AC008539.1-201ENST00000507653 CFHP08603 1231 aa8.48□□□□□ -1.05
AC008539.1-201ENST00000507653 WNT7AO00755 349 aa8.47□□□□□ -1.05
AC008539.1-201ENST00000507653 SCUBE3Q8IX30 993 aa8.47□□□□□ -1.05
AC008539.1-201ENST00000507653 SPSB2Q99619 263 aa8.47□□□□□ -1.05
AC008539.1-201ENST00000507653 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
AC008539.1-201ENST00000507653 NPDC1Q9NQX5 325 aaPredicted RBP8.45□□□□□ -1.06
AC008539.1-201ENST00000507653 PSMG3-AS1Q96PY0 264 aa8.44□□□□□ -1.06
AC008539.1-201ENST00000507653 GRXCR2A6NFK2 248 aa8.42□□□□□ -1.06
AC008539.1-201ENST00000507653 SPDYE16A6NNV3 312 aaPredicted RBP8.42□□□□□ -1.06
AC008539.1-201ENST00000507653 OSBPP22059 807 aa8.42□□□□□ -1.06
AC008539.1-201ENST00000507653 MRGPRX2Q96LB1 330 aa8.42□□□□□ -1.06
AC008539.1-201ENST00000507653 PLCB2Q00722 1185 aa8.41□□□□□ -1.06
AC008539.1-201ENST00000507653 GPAT2Q6NUI2 795 aa8.41□□□□□ -1.06
AC008539.1-201ENST00000507653 TRIM46Q7Z4K8 759 aa8.41□□□□□ -1.06
AC008539.1-201ENST00000507653 SLC10A3P09131 477 aa8.4□□□□□ -1.06
AC008539.1-201ENST00000507653 VSIG8P0DPA2 414 aa8.4□□□□□ -1.06
AC008539.1-201ENST00000507653 DNAJB2P25686 324 aa8.4□□□□□ -1.06
AC008539.1-201ENST00000507653 TMEM134Q9H6X4 195 aa8.4□□□□□ -1.06
AC008539.1-201ENST00000507653 WDR70Q9NW82 654 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms