RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 NEO1Q92859 1461 aa9.79□□□□□ -0.84
VEGFC-201ENST00000507638 HOXB3P14651 431 aaPredicted RBP9.79□□□□□ -0.84
VEGFC-201ENST00000507638 DSG2Q14126 1118 aa9.79□□□□□ -0.84
VEGFC-201ENST00000507638 ARHGEF12Q9NZN5 1544 aa9.77□□□□□ -0.84
VEGFC-201ENST00000507638 CADPS2Q86UW7 1296 aa9.77□□□□□ -0.85
VEGFC-201ENST00000507638 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
VEGFC-201ENST00000507638 FAM163AQ96GL9 167 aaPredicted RBP9.76□□□□□ -0.85
VEGFC-201ENST00000507638 DENND4BO75064 1496 aaPredicted RBP9.76□□□□□ -0.85
VEGFC-201ENST00000507638 IGF1RP08069 1367 aa9.75□□□□□ -0.85
VEGFC-201ENST00000507638 CAMSAP1Q5T5Y3 1602 aa9.75□□□□□ -0.85
VEGFC-201ENST00000507638 ZNF316A6NFI3 1004 aaPredicted RBP9.75□□□□□ -0.85
VEGFC-201ENST00000507638 HOXB1P14653 301 aaPredicted RBP9.75□□□□□ -0.85
VEGFC-201ENST00000507638 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
VEGFC-201ENST00000507638 BIVM-ERCC5R4GMW8 1640 aa9.74□□□□□ -0.85
VEGFC-201ENST00000507638 RICTORQ6R327 1708 aa9.74□□□□□ -0.85
VEGFC-201ENST00000507638 ARID3CA6NKF2 412 aa9.74□□□□□ -0.85
VEGFC-201ENST00000507638 ST18O60284 1047 aa9.74□□□□□ -0.85
VEGFC-201ENST00000507638 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
VEGFC-201ENST00000507638 IQGAP2Q13576 1575 aa9.74□□□□□ -0.85
VEGFC-201ENST00000507638 HAP1P54257 671 aaPredicted RBP9.73□□□□□ -0.85
VEGFC-201ENST00000507638 CAMK2BQ13554 666 aa9.73□□□□□ -0.85
VEGFC-201ENST00000507638 PTPRKQ15262 1439 aa9.73□□□□□ -0.85
VEGFC-201ENST00000507638 TRAPPC8Q9Y2L5 1435 aa9.73□□□□□ -0.85
VEGFC-201ENST00000507638 ZFYVE16Q7Z3T8 1539 aa9.72□□□□□ -0.85
VEGFC-201ENST00000507638 ABCA9Q8IUA7 1624 aa9.72□□□□□ -0.85
VEGFC-201ENST00000507638 FHOD3Q2V2M9 1422 aa9.72□□□□□ -0.85
VEGFC-201ENST00000507638 PSDA5PKW4 1024 aaPredicted RBP9.71□□□□□ -0.86
VEGFC-201ENST00000507638 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
VEGFC-201ENST00000507638 VSIG10Q8N0Z9 540 aa9.71□□□□□ -0.86
VEGFC-201ENST00000507638 E2F4Q16254 413 aa9.7□□□□□ -0.86
VEGFC-201ENST00000507638 GPR153Q6NV75 609 aa9.7□□□□□ -0.86
VEGFC-201ENST00000507638 OXER1Q8TDS5 423 aa9.7□□□□□ -0.86
VEGFC-201ENST00000507638 TRIM52Q96A61 297 aa9.7□□□□□ -0.86
VEGFC-201ENST00000507638 ARIH1Q9Y4X5 557 aaPredicted RBP9.7□□□□□ -0.86
VEGFC-201ENST00000507638 PCDHGA4Q9Y5G9 962 aa9.7□□□□□ -0.86
VEGFC-201ENST00000507638 EFCAB5A4FU69 1503 aa9.7□□□□□ -0.86
VEGFC-201ENST00000507638 ALKQ9UM73 1620 aa9.7□□□□□ -0.86
VEGFC-201ENST00000507638 C3P01024 1663 aa9.69□□□□□ -0.86
VEGFC-201ENST00000507638 RBM33Q96EV2 1170 aaKnown RBP9.69□□□□□ -0.86
VEGFC-201ENST00000507638 ESF1Q9H501 851 aaKnown RBP9.68□□□□□ -0.86
VEGFC-201ENST00000507638 CARMIL1Q5VZK9 1371 aa9.67□□□□□ -0.86
VEGFC-201ENST00000507638 EMP3P54852 163 aa9.67□□□□□ -0.86
VEGFC-201ENST00000507638 ATP10AO60312 1499 aa9.66□□□□□ -0.86
VEGFC-201ENST00000507638 MAGI2Q86UL8 1455 aa9.66□□□□□ -0.86
VEGFC-201ENST00000507638 MAP3K9P80192 1104 aa9.66□□□□□ -0.86
VEGFC-201ENST00000507638 CPS1P31327 1500 aa9.66□□□□□ -0.86
VEGFC-201ENST00000507638 ABCA8O94911 1581 aa9.65□□□□□ -0.86
VEGFC-201ENST00000507638 ZMYM4Q5VZL5 1548 aa9.65□□□□□ -0.86
VEGFC-201ENST00000507638 HECW1Q76N89 1606 aa9.64□□□□□ -0.87
VEGFC-201ENST00000507638 SPDYE16A6NNV3 312 aaPredicted RBP9.64□□□□□ -0.87
VEGFC-201ENST00000507638 ARSIQ5FYB1 569 aa9.64□□□□□ -0.87
VEGFC-201ENST00000507638 UGGT2Q9NYU1 1516 aa9.64□□□□□ -0.87
VEGFC-201ENST00000507638 SHANK2Q9UPX8 1470 aa9.64□□□□□ -0.87
VEGFC-201ENST00000507638 LCE2DQ5TA82 110 aaPredicted RBP9.63□□□□□ -0.87
VEGFC-201ENST00000507638 ATP10BO94823 1461 aa9.63□□□□□ -0.87
VEGFC-201ENST00000507638 C9orf84Q5VXU9 1444 aa9.63□□□□□ -0.87
VEGFC-201ENST00000507638 ARHGEF1Q92888 912 aaKnown RBP9.62□□□□□ -0.87
VEGFC-201ENST00000507638 ERBB3P21860 1342 aa9.61□□□□□ -0.87
VEGFC-201ENST00000507638 SUPT6HQ7KZ85 1726 aaKnown RBP9.61□□□□□ -0.87
VEGFC-201ENST00000507638 TCOF1Q13428 1488 aaKnown RBP9.6□□□□□ -0.87
VEGFC-201ENST00000507638 RAPGEF2Q9Y4G8 1499 aa9.6□□□□□ -0.87
VEGFC-201ENST00000507638 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
VEGFC-201ENST00000507638 EMILIN3Q9NT22 766 aa9.6□□□□□ -0.87
VEGFC-201ENST00000507638 PLA2R1Q13018 1463 aa9.59□□□□□ -0.87
VEGFC-201ENST00000507638 SETBP1Q9Y6X0 1596 aa9.59□□□□□ -0.87
VEGFC-201ENST00000507638 EVI5O60447 810 aa9.58□□□□□ -0.88
VEGFC-201ENST00000507638 NUDT7P0C024 238 aa9.58□□□□□ -0.88
VEGFC-201ENST00000507638 KIF27Q86VH2 1401 aa9.57□□□□□ -0.88
VEGFC-201ENST00000507638 RXRBP28702 533 aa9.57□□□□□ -0.88
VEGFC-201ENST00000507638 PDIA6Q15084 440 aa9.57□□□□□ -0.88
VEGFC-201ENST00000507638 MARVELD3Q96A59 401 aa9.57□□□□□ -0.88
VEGFC-201ENST00000507638 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
VEGFC-201ENST00000507638 SCAPERQ9BY12 1400 aa9.56□□□□□ -0.88
VEGFC-201ENST00000507638 DPYSL4O14531 572 aa9.55□□□□□ -0.88
VEGFC-201ENST00000507638 PBX2P40425 430 aa9.55□□□□□ -0.88
VEGFC-201ENST00000507638 PTGER2P43116 358 aa9.55□□□□□ -0.88
VEGFC-201ENST00000507638 PPP4R3BQ5MIZ7 849 aa9.55□□□□□ -0.88
VEGFC-201ENST00000507638 ZNF772Q68DY9 489 aaPredicted RBP9.55□□□□□ -0.88
VEGFC-201ENST00000507638 FAM9AQ8IZU1 332 aaPredicted RBP9.55□□□□□ -0.88
VEGFC-201ENST00000507638 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
VEGFC-201ENST00000507638 LRRC7Q96NW7 1537 aa9.54□□□□□ -0.88
VEGFC-201ENST00000507638 VARS2Q5ST30 1063 aaKnown RBP9.53□□□□□ -0.88
VEGFC-201ENST00000507638 HS3ST6Q96QI5 342 aa9.53□□□□□ -0.88
VEGFC-201ENST00000507638 LHX6Q9UPM6 363 aa9.53□□□□□ -0.88
VEGFC-201ENST00000507638 NPATQ14207 1427 aa9.53□□□□□ -0.88
VEGFC-201ENST00000507638 CFAP74Q9C0B2 1584 aa9.53□□□□□ -0.88
VEGFC-201ENST00000507638 ZMYM3Q14202 1370 aa9.52□□□□□ -0.88
VEGFC-201ENST00000507638 YY1P25490 414 aa9.52□□□□□ -0.89
VEGFC-201ENST00000507638 ZNF687Q8N1G0 1237 aa9.52□□□□□ -0.89
VEGFC-201ENST00000507638 FBXW7Q969H0 707 aa9.52□□□□□ -0.89
VEGFC-201ENST00000507638 EPAS1Q99814 870 aa9.52□□□□□ -0.89
VEGFC-201ENST00000507638 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
VEGFC-201ENST00000507638 KHSRPQ92945 711 aaKnown RBP eCLIP9.51□□□□□ -0.89
VEGFC-201ENST00000507638 NUTM2BA6NNL0 878 aaPredicted RBP9.5□□□□□ -0.89
VEGFC-201ENST00000507638 NUTM2EB1AL46 878 aaPredicted RBP9.5□□□□□ -0.89
VEGFC-201ENST00000507638 PHF14O94880 888 aa9.5□□□□□ -0.89
VEGFC-201ENST00000507638 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
VEGFC-201ENST00000507638 NUTM2AQ8IVF1 878 aaPredicted RBP9.5□□□□□ -0.89
VEGFC-201ENST00000507638 KDM2AQ9Y2K7 1162 aa9.5□□□□□ -0.89
VEGFC-201ENST00000507638 VWDEQ8N2E2 1590 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms