RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 GPR37O15354 613 aa9.79□□□□□ -0.84
CALCOCO2-208ENST00000506971 LMOD2Q6P5Q4 547 aa9.79□□□□□ -0.84
CALCOCO2-208ENST00000506971 METTL3Q86U44 580 aaKnown RBP9.79□□□□□ -0.84
CALCOCO2-208ENST00000506971 KRI1Q8N9T8 703 aaKnown RBP9.78□□□□□ -0.84
CALCOCO2-208ENST00000506971 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.77□□□□□ -0.85
CALCOCO2-208ENST00000506971 RDH13Q8NBN7 331 aa9.77□□□□□ -0.85
CALCOCO2-208ENST00000506971 MTRQ99707 1265 aa9.77□□□□□ -0.85
CALCOCO2-208ENST00000506971 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
CALCOCO2-208ENST00000506971 RSPH4AQ5TD94 716 aa9.76□□□□□ -0.85
CALCOCO2-208ENST00000506971 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
CALCOCO2-208ENST00000506971 CFHP08603 1231 aa9.75□□□□□ -0.85
CALCOCO2-208ENST00000506971 KMT5BQ4FZB7 885 aa9.75□□□□□ -0.85
CALCOCO2-208ENST00000506971 PCDHB3Q9Y5E6 796 aa9.75□□□□□ -0.85
CALCOCO2-208ENST00000506971 PRR14Q9BWN1 585 aa9.74□□□□□ -0.85
CALCOCO2-208ENST00000506971 IL21Q9HBE4 155 aa9.74□□□□□ -0.85
CALCOCO2-208ENST00000506971 ITGBL1O95965 494 aaPredicted RBP9.73□□□□□ -0.85
CALCOCO2-208ENST00000506971 ZNF516Q92618 1163 aa9.73□□□□□ -0.85
CALCOCO2-208ENST00000506971 MAP2K5Q13163 448 aa9.72□□□□□ -0.85
CALCOCO2-208ENST00000506971 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
CALCOCO2-208ENST00000506971 A0A0G2JS52 829 aa9.71□□□□□ -0.86
CALCOCO2-208ENST00000506971 IRF6O14896 467 aa9.7□□□□□ -0.86
CALCOCO2-208ENST00000506971 SLC10A3P09131 477 aa9.7□□□□□ -0.86
CALCOCO2-208ENST00000506971 PHOX2BQ99453 314 aa9.7□□□□□ -0.86
CALCOCO2-208ENST00000506971 DAXXQ9UER7 740 aaPredicted RBP9.7□□□□□ -0.86
CALCOCO2-208ENST00000506971 BLOC1S3Q6QNY0 202 aa9.69□□□□□ -0.86
CALCOCO2-208ENST00000506971 MINK1Q8N4C8 1332 aaPredicted RBP9.68□□□□□ -0.86
CALCOCO2-208ENST00000506971 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
CALCOCO2-208ENST00000506971 NKX2-3Q8TAU0 364 aa9.68□□□□□ -0.86
CALCOCO2-208ENST00000506971 CCDC102AQ96A19 550 aa9.68□□□□□ -0.86
CALCOCO2-208ENST00000506971 PUS10Q3MIT2 529 aaKnown RBP9.67□□□□□ -0.86
CALCOCO2-208ENST00000506971 IFFO2Q5TF58 517 aa9.67□□□□□ -0.86
CALCOCO2-208ENST00000506971 SULF1Q8IWU6 871 aa9.67□□□□□ -0.86
CALCOCO2-208ENST00000506971 ACTN4O43707 911 aaKnown RBP9.65□□□□□ -0.86
CALCOCO2-208ENST00000506971 ZC3H15Q8WU90 426 aaKnown RBP9.65□□□□□ -0.86
CALCOCO2-208ENST00000506971 ZPR1O75312 459 aa9.64□□□□□ -0.87
CALCOCO2-208ENST00000506971 TLL1O43897 1013 aa9.63□□□□□ -0.87
CALCOCO2-208ENST00000506971 NR1I2O75469 434 aa9.62□□□□□ -0.87
CALCOCO2-208ENST00000506971 GGCXP38435 758 aa9.62□□□□□ -0.87
CALCOCO2-208ENST00000506971 PPP1R18Q6NYC8 613 aa9.62□□□□□ -0.87
CALCOCO2-208ENST00000506971 FUT2Q10981 343 aa9.61□□□□□ -0.87
CALCOCO2-208ENST00000506971 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-208ENST00000506971 ZMYND10O75800 440 aa9.59□□□□□ -0.87
CALCOCO2-208ENST00000506971 BCANQ96GW7 911 aa9.59□□□□□ -0.87
CALCOCO2-208ENST00000506971 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
CALCOCO2-208ENST00000506971 CLCN1P35523 988 aa9.58□□□□□ -0.88
CALCOCO2-208ENST00000506971 GCGRP47871 477 aa9.58□□□□□ -0.88
CALCOCO2-208ENST00000506971 BARGINQ6ZT62 677 aa9.58□□□□□ -0.88
CALCOCO2-208ENST00000506971 SCUBE3Q8IX30 993 aa9.58□□□□□ -0.88
CALCOCO2-208ENST00000506971 ATP6V1AP38606 617 aa9.57□□□□□ -0.88
CALCOCO2-208ENST00000506971 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
CALCOCO2-208ENST00000506971 GRIPAP1Q4V328 841 aa9.56□□□□□ -0.88
CALCOCO2-208ENST00000506971 S1PR4O95977 384 aa9.55□□□□□ -0.88
CALCOCO2-208ENST00000506971 PRKD2Q9BZL6 878 aa9.55□□□□□ -0.88
CALCOCO2-208ENST00000506971 PPEF1O14829 653 aaPredicted RBP9.54□□□□□ -0.88
CALCOCO2-208ENST00000506971 RGS20O76081 388 aa9.54□□□□□ -0.88
CALCOCO2-208ENST00000506971 SPSB2Q99619 263 aa9.54□□□□□ -0.88
CALCOCO2-208ENST00000506971 CD46P15529 392 aa9.53□□□□□ -0.88
CALCOCO2-208ENST00000506971 NUTM1Q86Y26 1132 aa9.53□□□□□ -0.88
CALCOCO2-208ENST00000506971 IRX2Q9BZI1 471 aaPredicted RBP9.53□□□□□ -0.88
CALCOCO2-208ENST00000506971 SLC27A5Q9Y2P5 690 aa9.53□□□□□ -0.88
CALCOCO2-208ENST00000506971 KDM4AO75164 1064 aa9.52□□□□□ -0.89
CALCOCO2-208ENST00000506971 ADH1BP00325 375 aa9.52□□□□□ -0.89
CALCOCO2-208ENST00000506971 MORN1Q5T089 497 aa9.52□□□□□ -0.89
CALCOCO2-208ENST00000506971 SLC6A16Q9GZN6 736 aa9.52□□□□□ -0.89
CALCOCO2-208ENST00000506971 SSTR3P32745 418 aaPredicted RBP9.51□□□□□ -0.89
CALCOCO2-208ENST00000506971 FAM217BQ9NTX9 383 aaPredicted RBP9.51□□□□□ -0.89
CALCOCO2-208ENST00000506971 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
CALCOCO2-208ENST00000506971 FMNL1O95466 1100 aaPredicted RBP9.5□□□□□ -0.89
CALCOCO2-208ENST00000506971 AK7Q96M32 723 aa9.5□□□□□ -0.89
CALCOCO2-208ENST00000506971 REPIN1Q9BWE0 567 aaKnown RBP9.5□□□□□ -0.89
CALCOCO2-208ENST00000506971 SLC24A3Q9HC58 644 aa9.5□□□□□ -0.89
CALCOCO2-208ENST00000506971 HLA-CQ95604 372 aa9.48□□□□□ -0.89
CALCOCO2-208ENST00000506971 TMUB1Q9BVT8 246 aa9.48□□□□□ -0.89
CALCOCO2-208ENST00000506971 TRIM66O15016 1216 aa9.47□□□□□ -0.89
CALCOCO2-208ENST00000506971 GUCA2AQ02747 115 aa9.47□□□□□ -0.89
CALCOCO2-208ENST00000506971 GIGYF2Q6Y7W6 1299 aaKnown RBP9.47□□□□□ -0.89
CALCOCO2-208ENST00000506971 RNF19BQ6ZMZ0 732 aa9.46□□□□□ -0.9
CALCOCO2-208ENST00000506971 Q3C1V9 767 aa9.45□□□□□ -0.9
CALCOCO2-208ENST00000506971 SLC19A1P41440 591 aa9.44□□□□□ -0.9
CALCOCO2-208ENST00000506971 USP46P62068 366 aa9.44□□□□□ -0.9
CALCOCO2-208ENST00000506971 BEGAINQ9BUH8 593 aa9.44□□□□□ -0.9
CALCOCO2-208ENST00000506971 PRDM9Q9NQV7 894 aa9.44□□□□□ -0.9
CALCOCO2-208ENST00000506971 HOXA2O43364 376 aa9.43□□□□□ -0.9
CALCOCO2-208ENST00000506971 GFRA3O60609 400 aa9.43□□□□□ -0.9
CALCOCO2-208ENST00000506971 AMHR2Q16671 573 aa9.43□□□□□ -0.9
CALCOCO2-208ENST00000506971 ANKLE1Q8NAG6 615 aa9.43□□□□□ -0.9
CALCOCO2-208ENST00000506971 BRICD5Q6PL45 260 aa9.42□□□□□ -0.9
CALCOCO2-208ENST00000506971 PARP9Q8IXQ6 854 aa9.42□□□□□ -0.9
CALCOCO2-208ENST00000506971 SYMPKQ92797 1274 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-208ENST00000506971 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
CALCOCO2-208ENST00000506971 C6orf229H3BNL8 230 aa9.41□□□□□ -0.9
CALCOCO2-208ENST00000506971 PDE4DQ08499 809 aa9.41□□□□□ -0.9
CALCOCO2-208ENST00000506971 Q6ZNB5 142 aa9.41□□□□□ -0.9
CALCOCO2-208ENST00000506971 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
CALCOCO2-208ENST00000506971 FAM160A2Q8N612 972 aaPredicted RBP9.41□□□□□ -0.9
CALCOCO2-208ENST00000506971 THAP11Q96EK4 314 aa9.41□□□□□ -0.9
CALCOCO2-208ENST00000506971 ATP1B4Q9UN42 357 aaPredicted RBP9.41□□□□□ -0.9
CALCOCO2-208ENST00000506971 V9GY48 417 aaPredicted RBP9.41□□□□□ -0.9
CALCOCO2-208ENST00000506971 FDX1P10109 184 aa9.4□□□□□ -0.9
CALCOCO2-208ENST00000506971 NDUFV2P19404 249 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms