RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 PROCA1Q8NCQ7 364 aaPredicted RBP9.04□□□□□ -0.96
HERC6-207ENST00000506842 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.04□□□□□ -0.96
HERC6-207ENST00000506842 ZMYND15Q9H091 742 aa9.04□□□□□ -0.96
HERC6-207ENST00000506842 KIAA1468Q9P260 1216 aa9.04□□□□□ -0.96
HERC6-207ENST00000506842 PBX2P40425 430 aa9.03□□□□□ -0.96
HERC6-207ENST00000506842 POLR3EQ9NVU0 708 aa9.03□□□□□ -0.96
HERC6-207ENST00000506842 ZCCHC6Q5VYS8 1495 aaKnown RBP9.02□□□□□ -0.96
HERC6-207ENST00000506842 CLK2P49760 499 aaKnown RBP9.02□□□□□ -0.97
HERC6-207ENST00000506842 SPIRE2Q8WWL2 714 aa9.02□□□□□ -0.97
HERC6-207ENST00000506842 RABGEF1Q9UJ41 708 aa9.02□□□□□ -0.97
HERC6-207ENST00000506842 DDX11L8A8MPP1 907 aa9.01□□□□□ -0.97
HERC6-207ENST00000506842 DMRTA1Q5VZB9 504 aa9.01□□□□□ -0.97
HERC6-207ENST00000506842 EMP3P54852 163 aa9□□□□□ -0.97
HERC6-207ENST00000506842 TUSC1Q2TAM9 212 aa9□□□□□ -0.97
HERC6-207ENST00000506842 ZNF687Q8N1G0 1237 aa9□□□□□ -0.97
HERC6-207ENST00000506842 SPTLC1O15269 473 aa8.99□□□□□ -0.97
HERC6-207ENST00000506842 LIMD1Q9UGP4 676 aa8.99□□□□□ -0.97
HERC6-207ENST00000506842 UNC13AQ9UPW8 1703 aa8.98□□□□□ -0.97
HERC6-207ENST00000506842 GJA5P36382 358 aa8.98□□□□□ -0.97
HERC6-207ENST00000506842 RIC3Q7Z5B4 369 aa8.98□□□□□ -0.97
HERC6-207ENST00000506842 MARVELD3Q96A59 401 aa8.98□□□□□ -0.97
HERC6-207ENST00000506842 VPS9D1Q9Y2B5 631 aa8.98□□□□□ -0.97
HERC6-207ENST00000506842 AXIN2Q9Y2T1 843 aa8.98□□□□□ -0.97
HERC6-207ENST00000506842 SUPT5HO00267 1087 aaKnown RBP8.97□□□□□ -0.97
HERC6-207ENST00000506842 MCM6Q14566 821 aa8.97□□□□□ -0.97
HERC6-207ENST00000506842 PPP2R2DQ66LE6 453 aa8.97□□□□□ -0.97
HERC6-207ENST00000506842 RSBN1LQ6PCB5 846 aaPredicted RBP8.97□□□□□ -0.97
HERC6-207ENST00000506842 NUTM1Q86Y26 1132 aa8.97□□□□□ -0.97
HERC6-207ENST00000506842 FAM98CQ17RN3 349 aaKnown RBP8.96□□□□□ -0.98
HERC6-207ENST00000506842 SWT1Q5T5J6 900 aaKnown RBP8.96□□□□□ -0.98
HERC6-207ENST00000506842 FBXO31Q5XUX0 539 aaPredicted RBP8.96□□□□□ -0.98
HERC6-207ENST00000506842 SEPT9Q9UHD8 586 aaPredicted RBP8.96□□□□□ -0.98
HERC6-207ENST00000506842 BICRAQ9NZM4 1560 aa8.95□□□□□ -0.98
HERC6-207ENST00000506842 POTEB3A0JP26 581 aa8.95□□□□□ -0.98
HERC6-207ENST00000506842 FAM205CA6NFA0 338 aa8.95□□□□□ -0.98
HERC6-207ENST00000506842 MOXD2PA6NHM9 499 aa8.95□□□□□ -0.98
HERC6-207ENST00000506842 GCGRP47871 477 aa8.95□□□□□ -0.98
HERC6-207ENST00000506842 POTEBQ6S5H4 581 aa8.95□□□□□ -0.98
HERC6-207ENST00000506842 RDH13Q8NBN7 331 aa8.95□□□□□ -0.98
HERC6-207ENST00000506842 BHMG1C9JSJ3 638 aaPredicted RBP8.94□□□□□ -0.98
HERC6-207ENST00000506842 TK2O00142 265 aa8.94□□□□□ -0.98
HERC6-207ENST00000506842 SLC10A3P09131 477 aa8.94□□□□□ -0.98
HERC6-207ENST00000506842 RFC5P40937 340 aa8.94□□□□□ -0.98
HERC6-207ENST00000506842 USP46P62068 366 aa8.94□□□□□ -0.98
HERC6-207ENST00000506842 RSPH4AQ5TD94 716 aa8.94□□□□□ -0.98
HERC6-207ENST00000506842 LAPTM4BQ86VI4 370 aa8.94□□□□□ -0.98
HERC6-207ENST00000506842 KDM4AO75164 1064 aa8.93□□□□□ -0.98
HERC6-207ENST00000506842 BANK1Q8NDB2 785 aa8.93□□□□□ -0.98
HERC6-207ENST00000506842 A6NJR5 290 aa8.92□□□□□ -0.98
HERC6-207ENST00000506842 HS3ST6Q96QI5 342 aa8.92□□□□□ -0.98
HERC6-207ENST00000506842 ATP1B4Q9UN42 357 aaPredicted RBP8.92□□□□□ -0.98
HERC6-207ENST00000506842 LILRB3O75022 631 aa8.91□□□□□ -0.98
HERC6-207ENST00000506842 NDUFV2P19404 249 aa8.91□□□□□ -0.98
HERC6-207ENST00000506842 NBPF3Q9H094 633 aa8.91□□□□□ -0.98
HERC6-207ENST00000506842 SPDYE5A6NIY4 337 aa8.9□□□□□ -0.98
HERC6-207ENST00000506842 HOXA2O43364 376 aa8.9□□□□□ -0.98
HERC6-207ENST00000506842 TMEM259Q4ZIN3 620 aa8.9□□□□□ -0.98
HERC6-207ENST00000506842 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
HERC6-207ENST00000506842 FAM163AQ96GL9 167 aaPredicted RBP8.9□□□□□ -0.98
HERC6-207ENST00000506842 ARXQ96QS3 562 aa8.9□□□□□ -0.98
HERC6-207ENST00000506842 PCDHB15Q9Y5E8 787 aa8.9□□□□□ -0.98
HERC6-207ENST00000506842 UBTFP17480 764 aaKnown RBP8.89□□□□□ -0.99
HERC6-207ENST00000506842 HDGFP51858 240 aaKnown RBP8.89□□□□□ -0.99
HERC6-207ENST00000506842 QPCTQ16769 361 aa8.89□□□□□ -0.99
HERC6-207ENST00000506842 PRPF38BQ5VTL8 546 aaKnown RBP8.89□□□□□ -0.99
HERC6-207ENST00000506842 SAMD7Q7Z3H4 446 aa8.89□□□□□ -0.99
HERC6-207ENST00000506842 SLF2Q8IX21 1173 aa8.89□□□□□ -0.99
HERC6-207ENST00000506842 CLUAP1Q96AJ1 413 aa8.88□□□□□ -0.99
HERC6-207ENST00000506842 SLC4A3P48751 1232 aa8.87□□□□□ -0.99
HERC6-207ENST00000506842 LSM11P83369 360 aaKnown RBP eCLIP8.87□□□□□ -0.99
HERC6-207ENST00000506842 ZFRQ96KR1 1074 aaKnown RBP8.87□□□□□ -0.99
HERC6-207ENST00000506842 SHROOM4Q9ULL8 1493 aa8.87□□□□□ -0.99
HERC6-207ENST00000506842 SOCS7O14512 581 aa8.86□□□□□ -0.99
HERC6-207ENST00000506842 HRO43593 1189 aa8.86□□□□□ -0.99
HERC6-207ENST00000506842 FDX1P10109 184 aa8.86□□□□□ -0.99
HERC6-207ENST00000506842 CSPP1Q1MSJ5 1256 aa8.86□□□□□ -0.99
HERC6-207ENST00000506842 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
HERC6-207ENST00000506842 ADGRD1Q6QNK2 874 aa8.86□□□□□ -0.99
HERC6-207ENST00000506842 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
HERC6-207ENST00000506842 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
HERC6-207ENST00000506842 TRAK2O60296 914 aa8.84□□□□□ -0.99
HERC6-207ENST00000506842 CFHP08603 1231 aa8.84□□□□□ -0.99
HERC6-207ENST00000506842 HRCP23327 699 aa8.84□□□□□ -0.99
HERC6-207ENST00000506842 MRPL50Q8N5N7 158 aaKnown RBP8.84□□□□□ -0.99
HERC6-207ENST00000506842 CABLES1Q8TDN4 633 aa8.84□□□□□ -0.99
HERC6-207ENST00000506842 ZBTB3Q9H5J0 574 aa8.84□□□□□ -0.99
HERC6-207ENST00000506842 C1orf115Q9H7X2 142 aa8.84□□□□□ -0.99
HERC6-207ENST00000506842 GUCA2AQ02747 115 aa8.83□□□□□ -1
HERC6-207ENST00000506842 FNBP4Q8N3X1 1017 aaPredicted RBP8.83□□□□□ -1
HERC6-207ENST00000506842 HLA-CQ95604 372 aa8.83□□□□□ -1
HERC6-207ENST00000506842 POM121Q96HA1 1249 aa8.83□□□□□ -1
HERC6-207ENST00000506842 FUT2Q10981 343 aa8.82□□□□□ -1
HERC6-207ENST00000506842 MTMR14Q8NCE2 650 aa8.82□□□□□ -1
HERC6-207ENST00000506842 COG6Q9Y2V7 657 aa8.82□□□□□ -1
HERC6-207ENST00000506842 NUTM2BA6NNL0 878 aaPredicted RBP8.81□□□□□ -1
HERC6-207ENST00000506842 NUTM2EB1AL46 878 aaPredicted RBP8.81□□□□□ -1
HERC6-207ENST00000506842 ATP6V1AP38606 617 aa8.81□□□□□ -1
HERC6-207ENST00000506842 GRIPAP1Q4V328 841 aa8.81□□□□□ -1
HERC6-207ENST00000506842 NUTM2DQ5VT03 806 aaPredicted RBP8.81□□□□□ -1
HERC6-207ENST00000506842 PROSER2Q86WR7 435 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms