RNA–Protein interactions for RNA: ENST00000506396.1

CDH6-203, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-203ENST00000506396 MYH16Q9H6N6 1097 aa23.18■■□□□ 1.3
CDH6-203ENST00000506396 GPRASP1Q5JY77 1395 aa23.18■■□□□ 1.3
CDH6-203ENST00000506396 ANTXR1Q9H6X2 564 aa23.18■■□□□ 1.3
CDH6-203ENST00000506396 ZNF521Q96K83 1311 aa23.16■■□□□ 1.3
CDH6-203ENST00000506396 MRE11P49959 708 aa23.16■■□□□ 1.3
CDH6-203ENST00000506396 EIF4G3O43432 1585 aaKnown RBP23.15■■□□□ 1.3
CDH6-203ENST00000506396 SEC24BO95487 1268 aa23.14■■□□□ 1.3
CDH6-203ENST00000506396 PPP2R1AP30153 589 aa23.14■■□□□ 1.29
CDH6-203ENST00000506396 PRDM15P57071 1507 aaPredicted RBP23.14■■□□□ 1.29
CDH6-203ENST00000506396 FAM135AQ9P2D6 1515 aa23.13■■□□□ 1.29
CDH6-203ENST00000506396 HNRNPMP52272 730 aaKnown RBP eCLIP23.12■■□□□ 1.29
CDH6-203ENST00000506396 SLFN5Q08AF3 891 aa23.12■■□□□ 1.29
CDH6-203ENST00000506396 TRIM44Q96DX7 344 aaPredicted RBP23.12■■□□□ 1.29
CDH6-203ENST00000506396 MCM4P33991 863 aa23.12■■□□□ 1.29
CDH6-203ENST00000506396 A2MP01023 1474 aa23.12■■□□□ 1.29
CDH6-203ENST00000506396 EIF3AQ14152 1382 aaKnown RBP23.11■■□□□ 1.29
CDH6-203ENST00000506396 KNSTRNQ9Y448 316 aa23.11■■□□□ 1.29
CDH6-203ENST00000506396 BCAR3O75815 825 aa23.1■■□□□ 1.29
CDH6-203ENST00000506396 IGHDP01880 384 aa23.1■■□□□ 1.29
CDH6-203ENST00000506396 GRPEL1Q9HAV7 217 aa23.1■■□□□ 1.29
CDH6-203ENST00000506396 CCDC146Q8IYE0 955 aa23.09■■□□□ 1.29
CDH6-203ENST00000506396 SPRYD3Q8NCJ5 442 aa23.09■■□□□ 1.29
CDH6-203ENST00000506396 KIAA1211Q6ZU35 1233 aa23.09■■□□□ 1.29
CDH6-203ENST00000506396 PLEKHD1A6NEE1 506 aa23.08■■□□□ 1.29
CDH6-203ENST00000506396 TRAK2O60296 914 aa23.08■■□□□ 1.29
CDH6-203ENST00000506396 FGD1P98174 961 aa23.07■■□□□ 1.28
CDH6-203ENST00000506396 LAMC1P11047 1609 aa23.07■■□□□ 1.28
CDH6-203ENST00000506396 SPINK5Q9NQ38 1064 aaPredicted RBP23.07■■□□□ 1.28
CDH6-203ENST00000506396 DNAJC5BQ9UF47 199 aa23.06■■□□□ 1.28
CDH6-203ENST00000506396 MAGI2Q86UL8 1455 aa23.06■■□□□ 1.28
CDH6-203ENST00000506396 VIRMAQ69YN4 1812 aaKnown RBP23.06■■□□□ 1.28
CDH6-203ENST00000506396 GRIN2AQ12879 1464 aa23.05■■□□□ 1.28
CDH6-203ENST00000506396 ABCC10Q5T3U5 1492 aa23.04■■□□□ 1.28
CDH6-203ENST00000506396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.04■■□□□ 1.28
CDH6-203ENST00000506396 NKTRP30414 1462 aaKnown RBP23.04■■□□□ 1.28
CDH6-203ENST00000506396 TBC1D2Q9BYX2 928 aa23.04■■□□□ 1.28
CDH6-203ENST00000506396 PLA2R1Q13018 1463 aa23.03■■□□□ 1.28
CDH6-203ENST00000506396 TRMT2AQ8IZ69 625 aaKnown RBP23.03■■□□□ 1.28
CDH6-203ENST00000506396 AMER1Q5JTC6 1135 aaPredicted RBP23.02■■□□□ 1.28
CDH6-203ENST00000506396 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
CDH6-203ENST00000506396 MAPK8IP3Q9UPT6 1336 aa23.02■■□□□ 1.28
CDH6-203ENST00000506396 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.27
CDH6-203ENST00000506396 APAF1O14727 1248 aa23.01■■□□□ 1.27
CDH6-203ENST00000506396 MAGI1Q96QZ7 1491 aaPredicted RBP23.01■■□□□ 1.27
CDH6-203ENST00000506396 EIF2AK4Q9P2K8 1649 aaKnown RBP23■■□□□ 1.27
CDH6-203ENST00000506396 CGNL1Q0VF96 1302 aa22.99■■□□□ 1.27
CDH6-203ENST00000506396 MYO5CQ9NQX4 1742 aa22.98■■□□□ 1.27
CDH6-203ENST00000506396 CANXP27824 592 aaKnown RBP22.98■■□□□ 1.27
CDH6-203ENST00000506396 CLUAP1Q96AJ1 413 aa22.98■■□□□ 1.27
CDH6-203ENST00000506396 UPF2Q9HAU5 1272 aaKnown RBP22.98■■□□□ 1.27
CDH6-203ENST00000506396 COG6Q9Y2V7 657 aa22.97■■□□□ 1.27
CDH6-203ENST00000506396 NLRP1Q9C000 1473 aa22.97■■□□□ 1.27
CDH6-203ENST00000506396 E9PSI1 815 aa22.96■■□□□ 1.27
CDH6-203ENST00000506396 ARHGEF5Q12774 1597 aa22.96■■□□□ 1.27
CDH6-203ENST00000506396 CCDC141Q6ZP82 1450 aa22.96■■□□□ 1.27
CDH6-203ENST00000506396 PANK1Q8TE04 598 aa22.96■■□□□ 1.27
CDH6-203ENST00000506396 FAM13BQ9NYF5 915 aa22.96■■□□□ 1.27
CDH6-203ENST00000506396 DMRT2Q9Y5R5 561 aa22.95■■□□□ 1.26
CDH6-203ENST00000506396 PIK3C2GO75747 1445 aa22.94■■□□□ 1.26
CDH6-203ENST00000506396 NUP160Q12769 1436 aa22.94■■□□□ 1.26
CDH6-203ENST00000506396 RIPK4P57078 832 aa22.94■■□□□ 1.26
CDH6-203ENST00000506396 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
CDH6-203ENST00000506396 PDE3AQ14432 1141 aa22.94■■□□□ 1.26
CDH6-203ENST00000506396 SYNJ2O15056 1496 aa22.94■■□□□ 1.26
CDH6-203ENST00000506396 CARMIL2Q6F5E8 1435 aa22.92■■□□□ 1.26
CDH6-203ENST00000506396 CHMP5Q9NZZ3 219 aa22.92■■□□□ 1.26
CDH6-203ENST00000506396 ISY1Q9ULR0 285 aaKnown RBP22.92■■□□□ 1.26
CDH6-203ENST00000506396 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
CDH6-203ENST00000506396 TBC1D32Q96NH3 1257 aa22.92■■□□□ 1.26
CDH6-203ENST00000506396 ASXL1Q8IXJ9 1541 aa22.92■■□□□ 1.26
CDH6-203ENST00000506396 ATP10BO94823 1461 aa22.91■■□□□ 1.26
CDH6-203ENST00000506396 ARID3AQ99856 593 aa22.91■■□□□ 1.26
CDH6-203ENST00000506396 ABCC2Q92887 1545 aa22.9■■□□□ 1.26
CDH6-203ENST00000506396 MAP7D2Q96T17 732 aa22.89■■□□□ 1.26
CDH6-203ENST00000506396 PDE4CQ08493 712 aa22.89■■□□□ 1.25
CDH6-203ENST00000506396 ABCA8O94911 1581 aa22.89■■□□□ 1.25
CDH6-203ENST00000506396 GAS2L3Q86XJ1 694 aa22.89■■□□□ 1.25
CDH6-203ENST00000506396 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
CDH6-203ENST00000506396 OFD1O75665 1012 aa22.88■■□□□ 1.25
CDH6-203ENST00000506396 RNF17Q9BXT8 1623 aaKnown RBP22.88■■□□□ 1.25
CDH6-203ENST00000506396 DDX11L8A8MPP1 907 aa22.88■■□□□ 1.25
CDH6-203ENST00000506396 CDCA8Q53HL2 280 aa22.88■■□□□ 1.25
CDH6-203ENST00000506396 FBLN2P98095 1184 aa22.87■■□□□ 1.25
CDH6-203ENST00000506396 ZHX1Q9UKY1 873 aaPredicted RBP22.87■■□□□ 1.25
CDH6-203ENST00000506396 SAMD9LQ8IVG5 1584 aa22.87■■□□□ 1.25
CDH6-203ENST00000506396 JPH4Q96JJ6 628 aa22.87■■□□□ 1.25
CDH6-203ENST00000506396 UNC13BO14795 1591 aa22.87■■□□□ 1.25
CDH6-203ENST00000506396 SYNMO15061 1565 aa22.87■■□□□ 1.25
CDH6-203ENST00000506396 NINLQ9Y2I6 1382 aa22.87■■□□□ 1.25
CDH6-203ENST00000506396 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.85■■□□□ 1.25
CDH6-203ENST00000506396 SMAP1Q8IYB5 467 aaPredicted RBP22.85■■□□□ 1.25
CDH6-203ENST00000506396 ZSCAN30Q86W11 494 aa22.84■■□□□ 1.25
CDH6-203ENST00000506396 PMFBP1Q8TBY8 1022 aa22.84■■□□□ 1.25
CDH6-203ENST00000506396 R3HCC1Q9Y3T6 440 aaKnown RBP22.84■■□□□ 1.25
CDH6-203ENST00000506396 PRDM10Q9NQV6 1147 aa22.83■■□□□ 1.25
CDH6-203ENST00000506396 MSNP26038 577 aaKnown RBP22.83■■□□□ 1.24
CDH6-203ENST00000506396 RSPH4AQ5TD94 716 aa22.83■■□□□ 1.24
CDH6-203ENST00000506396 PDZRN3Q9UPQ7 1066 aa22.82■■□□□ 1.24
CDH6-203ENST00000506396 PCDHB15Q9Y5E8 787 aa22.82■■□□□ 1.24
CDH6-203ENST00000506396 NPC1L1Q9UHC9 1359 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms