RNA–Protein interactions for RNA: ENST00000506334.1

ARHGEF28-207, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 536 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-207ENST00000506334 CFAP65Q6ZU64 1925 aaKnown RBP12.45□□□□□ -0.42
ARHGEF28-207ENST00000506334 IDI1Q13907 227 aa12.44□□□□□ -0.42
ARHGEF28-207ENST00000506334 SLC26A8Q96RN1 970 aa12.43□□□□□ -0.42
ARHGEF28-207ENST00000506334 XIRP1Q702N8 1843 aaKnown RBP12.43□□□□□ -0.42
ARHGEF28-207ENST00000506334 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
ARHGEF28-207ENST00000506334 RBM33Q96EV2 1170 aaKnown RBP12.42□□□□□ -0.42
ARHGEF28-207ENST00000506334 MAST1Q9Y2H9 1570 aa12.42□□□□□ -0.42
ARHGEF28-207ENST00000506334 EIF2AK4Q9P2K8 1649 aaKnown RBP12.41□□□□□ -0.42
ARHGEF28-207ENST00000506334 SP7Q8TDD2 431 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF28-207ENST00000506334 JCADQ9P266 1359 aa12.41□□□□□ -0.42
ARHGEF28-207ENST00000506334 ZNF772Q68DY9 489 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF28-207ENST00000506334 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
ARHGEF28-207ENST00000506334 DUOX2Q9NRD8 1548 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 BCANQ96GW7 911 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 RRP7BPQ9NSQ0 103 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 MROH1Q8NDA8 1641 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 MSH6P52701 1360 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 LRRC9Q6ZRR7 1453 aa12.39□□□□□ -0.43
ARHGEF28-207ENST00000506334 MYOM3Q5VTT5 1437 aa12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 HDGFP51858 240 aaKnown RBP12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 SLC52A1Q9NWF4 448 aa12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 KANK1Q14678 1352 aa12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 TET3O43151 1660 aa12.38□□□□□ -0.43
ARHGEF28-207ENST00000506334 SPATA31A6Q5VVP1 1343 aa12.37□□□□□ -0.43
ARHGEF28-207ENST00000506334 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
ARHGEF28-207ENST00000506334 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF28-207ENST00000506334 CEP152O94986 1710 aa12.36□□□□□ -0.43
ARHGEF28-207ENST00000506334 KIF15Q9NS87 1388 aa12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 RXRBP28702 533 aa12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 KANK4Q5T7N3 995 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 MEX3CQ5U5Q3 659 aaKnown RBP12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 MAP3K1Q13233 1512 aa12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 EFCAB6Q5THR3 1501 aa12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 ERBINQ96RT1 1412 aa12.35□□□□□ -0.43
ARHGEF28-207ENST00000506334 TBX22Q9Y458 520 aa12.34□□□□□ -0.43
ARHGEF28-207ENST00000506334 NCOA3Q9Y6Q9 1424 aa12.34□□□□□ -0.43
ARHGEF28-207ENST00000506334 NKTRP30414 1462 aaKnown RBP12.34□□□□□ -0.43
ARHGEF28-207ENST00000506334 PIK3C2BO00750 1634 aa12.33□□□□□ -0.43
ARHGEF28-207ENST00000506334 TRIM52Q96A61 297 aa12.33□□□□□ -0.44
ARHGEF28-207ENST00000506334 KDM5AP29375 1690 aaKnown RBP12.32□□□□□ -0.44
ARHGEF28-207ENST00000506334 FGD6Q6ZV73 1430 aa12.32□□□□□ -0.44
ARHGEF28-207ENST00000506334 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
ARHGEF28-207ENST00000506334 CADPS2Q86UW7 1296 aa12.32□□□□□ -0.44
ARHGEF28-207ENST00000506334 C19orf44Q9H6X5 657 aa12.32□□□□□ -0.44
ARHGEF28-207ENST00000506334 ABCC5O15440 1437 aa12.31□□□□□ -0.44
ARHGEF28-207ENST00000506334 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
ARHGEF28-207ENST00000506334 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
ARHGEF28-207ENST00000506334 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
ARHGEF28-207ENST00000506334 PHLPP1O60346 1717 aa12.31□□□□□ -0.44
ARHGEF28-207ENST00000506334 NOS1P29475 1434 aa12.3□□□□□ -0.44
ARHGEF28-207ENST00000506334 ATF3P18847 181 aa12.3□□□□□ -0.44
ARHGEF28-207ENST00000506334 C14orf37Q86TY3 774 aa12.3□□□□□ -0.44
ARHGEF28-207ENST00000506334 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
ARHGEF28-207ENST00000506334 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
ARHGEF28-207ENST00000506334 HAX1O00165 279 aa12.29□□□□□ -0.44
ARHGEF28-207ENST00000506334 PPP1R15AO75807 674 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF28-207ENST00000506334 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.29□□□□□ -0.44
ARHGEF28-207ENST00000506334 NWD1Q149M9 1564 aa12.28□□□□□ -0.44
ARHGEF28-207ENST00000506334 CHIC2Q9UKJ5 165 aa12.28□□□□□ -0.44
ARHGEF28-207ENST00000506334 ANKRD30AQ9BXX3 1397 aa12.28□□□□□ -0.44
ARHGEF28-207ENST00000506334 SETD1AO15047 1707 aaKnown RBP12.27□□□□□ -0.45
ARHGEF28-207ENST00000506334 VPS8Q8N3P4 1428 aa12.27□□□□□ -0.45
ARHGEF28-207ENST00000506334 LRP6O75581 1613 aa12.26□□□□□ -0.45
ARHGEF28-207ENST00000506334 COL16A1Q07092 1604 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF28-207ENST00000506334 CHD2O14647 1828 aaKnown RBP12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 NUTM2BA6NNL0 878 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 NUTM2EB1AL46 878 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 NUTM2AQ8IVF1 878 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 CDK12Q9NYV4 1490 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF28-207ENST00000506334 ADGRB3O60242 1522 aa12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 ZFYVE9O95405 1425 aa12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 DAPK1P53355 1430 aa12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 BRINP3Q76B58 766 aa12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 QTRT2Q9H974 415 aaKnown RBP12.24□□□□□ -0.45
ARHGEF28-207ENST00000506334 PIK3R4Q99570 1358 aa12.23□□□□□ -0.45
ARHGEF28-207ENST00000506334 RBM6P78332 1123 aaKnown RBP12.23□□□□□ -0.45
ARHGEF28-207ENST00000506334 AMOTL2Q9Y2J4 779 aa12.23□□□□□ -0.45
ARHGEF28-207ENST00000506334 AFF2P51816 1311 aa12.22□□□□□ -0.45
ARHGEF28-207ENST00000506334 CHGAP10645 457 aaKnown RBP12.22□□□□□ -0.45
ARHGEF28-207ENST00000506334 RPRD2Q5VT52 1461 aaKnown RBP12.21□□□□□ -0.45
ARHGEF28-207ENST00000506334 AHDC1Q5TGY3 1603 aaPredicted RBP12.21□□□□□ -0.46
ARHGEF28-207ENST00000506334 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
ARHGEF28-207ENST00000506334 NUTM2DQ5VT03 806 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF28-207ENST00000506334 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
ARHGEF28-207ENST00000506334 SHPRHQ149N8 1683 aa12.19□□□□□ -0.46
ARHGEF28-207ENST00000506334 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
ARHGEF28-207ENST00000506334 SRCAPQ6ZRS2 3230 aa12.19□□□□□ -0.46
ARHGEF28-207ENST00000506334 NGLY1Q96IV0 654 aa12.19□□□□□ -0.46
ARHGEF28-207ENST00000506334 SETD5Q9C0A6 1442 aa12.19□□□□□ -0.46
ARHGEF28-207ENST00000506334 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF28-207ENST00000506334 C8orf37Q96NL8 207 aa12.18□□□□□ -0.46
ARHGEF28-207ENST00000506334 CROCC2H7BZ55 1655 aa12.17□□□□□ -0.46
ARHGEF28-207ENST00000506334 SPDYE1Q8NFV5 336 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF28-207ENST00000506334 DCCP43146 1447 aa12.16□□□□□ -0.46
ARHGEF28-207ENST00000506334 ANKRD50Q9ULJ7 1429 aa12.16□□□□□ -0.46
ARHGEF28-207ENST00000506334 TMEM131LA2VDJ0 1609 aa12.15□□□□□ -0.46
ARHGEF28-207ENST00000506334 DIP2AQ14689 1571 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms