RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 SKAP1Q86WV1 359 aa10.04□□□□□ -0.8
PPARGC1A-204ENST00000506055 TRPM2O94759 1503 aa10.04□□□□□ -0.8
PPARGC1A-204ENST00000506055 STAC3Q96MF2 364 aa10.04□□□□□ -0.8
PPARGC1A-204ENST00000506055 INSRP06213 1382 aa10.04□□□□□ -0.8
PPARGC1A-204ENST00000506055 SCAPERQ9BY12 1400 aa10.04□□□□□ -0.8
PPARGC1A-204ENST00000506055 ZFYVE16Q7Z3T8 1539 aa10.04□□□□□ -0.8
PPARGC1A-204ENST00000506055 CCDC146Q8IYE0 955 aa10.03□□□□□ -0.8
PPARGC1A-204ENST00000506055 PTPRTO14522 1441 aa10.03□□□□□ -0.8
PPARGC1A-204ENST00000506055 ZMYM4Q5VZL5 1548 aa10.03□□□□□ -0.8
PPARGC1A-204ENST00000506055 CLTCL1P53675 1640 aa10.03□□□□□ -0.8
PPARGC1A-204ENST00000506055 PLEKHH1Q9ULM0 1364 aa10.03□□□□□ -0.8
PPARGC1A-204ENST00000506055 FANCAO15360 1455 aa10.03□□□□□ -0.8
PPARGC1A-204ENST00000506055 CLASP1Q7Z460 1538 aa10.02□□□□□ -0.81
PPARGC1A-204ENST00000506055 EIF3AQ14152 1382 aaKnown RBP10.02□□□□□ -0.81
PPARGC1A-204ENST00000506055 GOLGA2Q08379 1002 aa10.02□□□□□ -0.81
PPARGC1A-204ENST00000506055 DUSP27Q5VZP5 1158 aa10.02□□□□□ -0.81
PPARGC1A-204ENST00000506055 SPHKAPQ2M3C7 1700 aa10.02□□□□□ -0.81
PPARGC1A-204ENST00000506055 IQGAP1P46940 1657 aa10.02□□□□□ -0.81
PPARGC1A-204ENST00000506055 ADGRF5Q8IZF2 1346 aa10.02□□□□□ -0.81
PPARGC1A-204ENST00000506055 BACH2Q9BYV9 841 aa10.02□□□□□ -0.81
PPARGC1A-204ENST00000506055 CEP152O94986 1710 aa10.01□□□□□ -0.81
PPARGC1A-204ENST00000506055 ASXL1Q8IXJ9 1541 aa10.01□□□□□ -0.81
PPARGC1A-204ENST00000506055 CHGAP10645 457 aaKnown RBP10.01□□□□□ -0.81
PPARGC1A-204ENST00000506055 ATP7AQ04656 1500 aa10□□□□□ -0.81
PPARGC1A-204ENST00000506055 MS4A1P11836 297 aa10□□□□□ -0.81
PPARGC1A-204ENST00000506055 DEKP35659 375 aaKnown RBP10□□□□□ -0.81
PPARGC1A-204ENST00000506055 UGGT1Q9NYU2 1555 aa10□□□□□ -0.81
PPARGC1A-204ENST00000506055 APAF1O14727 1248 aa10□□□□□ -0.81
PPARGC1A-204ENST00000506055 SYNMO15061 1565 aa10□□□□□ -0.81
PPARGC1A-204ENST00000506055 ADGRL1O94910 1474 aa9.99□□□□□ -0.81
PPARGC1A-204ENST00000506055 TET3O43151 1660 aa9.99□□□□□ -0.81
PPARGC1A-204ENST00000506055 CARD14Q9BXL6 1004 aa9.99□□□□□ -0.81
PPARGC1A-204ENST00000506055 DEPDC5O75140 1603 aa9.98□□□□□ -0.81
PPARGC1A-204ENST00000506055 ZNF521Q96K83 1311 aa9.98□□□□□ -0.81
PPARGC1A-204ENST00000506055 ARAP3Q8WWN8 1544 aa9.98□□□□□ -0.81
PPARGC1A-204ENST00000506055 SLFN5Q08AF3 891 aa9.98□□□□□ -0.81
PPARGC1A-204ENST00000506055 SPINK5Q9NQ38 1064 aaPredicted RBP9.98□□□□□ -0.81
PPARGC1A-204ENST00000506055 PIK3C2GO75747 1445 aa9.97□□□□□ -0.81
PPARGC1A-204ENST00000506055 TNNT2P45379 298 aaPredicted RBP9.97□□□□□ -0.81
PPARGC1A-204ENST00000506055 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.97□□□□□ -0.81
PPARGC1A-204ENST00000506055 SLC24A1O60721 1099 aa9.96□□□□□ -0.81
PPARGC1A-204ENST00000506055 TRAK1Q9UPV9 953 aa9.96□□□□□ -0.81
PPARGC1A-204ENST00000506055 MYOM1P52179 1685 aa9.96□□□□□ -0.81
PPARGC1A-204ENST00000506055 INO80Q9ULG1 1556 aaPredicted RBP9.96□□□□□ -0.82
PPARGC1A-204ENST00000506055 NPC1L1Q9UHC9 1359 aa9.96□□□□□ -0.82
PPARGC1A-204ENST00000506055 RTL5Q5HYW3 569 aaPredicted RBP9.96□□□□□ -0.82
PPARGC1A-204ENST00000506055 GGT6Q6P531 493 aa9.96□□□□□ -0.82
PPARGC1A-204ENST00000506055 VWDEQ8N2E2 1590 aa9.96□□□□□ -0.82
PPARGC1A-204ENST00000506055 ERVK-7P63135 1459 aa9.95□□□□□ -0.82
PPARGC1A-204ENST00000506055 KDM5AP29375 1690 aaKnown RBP9.95□□□□□ -0.82
PPARGC1A-204ENST00000506055 BCAR3O75815 825 aa9.95□□□□□ -0.82
PPARGC1A-204ENST00000506055 ABCA9Q8IUA7 1624 aa9.95□□□□□ -0.82
PPARGC1A-204ENST00000506055 ASXL2Q76L83 1435 aa9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 MAP3K4Q9Y6R4 1608 aa9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 CENPQQ7L2Z9 268 aaPredicted RBP9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 LAS1LQ9Y4W2 734 aaKnown RBP9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 KDM2BQ8NHM5 1336 aa9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 NEUROD2Q15784 382 aa9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 TMEM132EQ6IEE7 984 aa9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 TRMT2AQ8IZ69 625 aaKnown RBP9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 DMRT2Q9Y5R5 561 aa9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 CENPJQ9HC77 1338 aaPredicted RBP9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 ABCA6Q8N139 1617 aa9.94□□□□□ -0.82
PPARGC1A-204ENST00000506055 SLC12A5Q9H2X9 1139 aa9.93□□□□□ -0.82
PPARGC1A-204ENST00000506055 MROH1Q8NDA8 1641 aa9.93□□□□□ -0.82
PPARGC1A-204ENST00000506055 NOS1P29475 1434 aa9.93□□□□□ -0.82
PPARGC1A-204ENST00000506055 E9PSI1 815 aa9.93□□□□□ -0.82
PPARGC1A-204ENST00000506055 KIAA1210Q9ULL0 1709 aa9.93□□□□□ -0.82
PPARGC1A-204ENST00000506055 MYOM2P54296 1465 aa9.93□□□□□ -0.82
PPARGC1A-204ENST00000506055 NPM1P06748 294 aaKnown RBP eCLIP9.92□□□□□ -0.82
PPARGC1A-204ENST00000506055 NUTM2DQ5VT03 806 aaPredicted RBP9.92□□□□□ -0.82
PPARGC1A-204ENST00000506055 MORC1Q86VD1 984 aa9.92□□□□□ -0.82
PPARGC1A-204ENST00000506055 KIF1BO60333 1816 aa9.92□□□□□ -0.82
PPARGC1A-204ENST00000506055 RGS3P49796 1198 aa9.92□□□□□ -0.82
PPARGC1A-204ENST00000506055 NKTRP30414 1462 aaKnown RBP9.92□□□□□ -0.82
PPARGC1A-204ENST00000506055 EFCAB6Q5THR3 1501 aa9.92□□□□□ -0.82
PPARGC1A-204ENST00000506055 RRP7AQ9Y3A4 280 aaKnown RBP9.91□□□□□ -0.82
PPARGC1A-204ENST00000506055 PPRC1Q5VV67 1664 aaKnown RBP9.9□□□□□ -0.82
PPARGC1A-204ENST00000506055 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
PPARGC1A-204ENST00000506055 ZNF518AQ6AHZ1 1483 aa9.9□□□□□ -0.82
PPARGC1A-204ENST00000506055 NEFMP07197 916 aa9.9□□□□□ -0.82
PPARGC1A-204ENST00000506055 C14orf93Q9H972 538 aaKnown RBP9.9□□□□□ -0.82
PPARGC1A-204ENST00000506055 KIDINS220Q9ULH0 1771 aa9.9□□□□□ -0.82
PPARGC1A-204ENST00000506055 MROH2AA6NES4 1674 aa9.9□□□□□ -0.83
PPARGC1A-204ENST00000506055 NEURL4Q96JN8 1562 aa9.9□□□□□ -0.83
PPARGC1A-204ENST00000506055 CFAP65Q6ZU64 1925 aaKnown RBP9.9□□□□□ -0.83
PPARGC1A-204ENST00000506055 NSD3Q9BZ95 1437 aa9.9□□□□□ -0.83
PPARGC1A-204ENST00000506055 CANXP27824 592 aaKnown RBP9.89□□□□□ -0.83
PPARGC1A-204ENST00000506055 SLC4A3P48751 1232 aa9.89□□□□□ -0.83
PPARGC1A-204ENST00000506055 FAM161AQ3B820 660 aa9.88□□□□□ -0.83
PPARGC1A-204ENST00000506055 FRAT1Q92837 279 aaPredicted RBP9.88□□□□□ -0.83
PPARGC1A-204ENST00000506055 DDRGK1Q96HY6 314 aa9.88□□□□□ -0.83
PPARGC1A-204ENST00000506055 NPATQ14207 1427 aa9.88□□□□□ -0.83
PPARGC1A-204ENST00000506055 NRXN1Q9ULB1 1477 aa9.88□□□□□ -0.83
PPARGC1A-204ENST00000506055 POLR3AO14802 1390 aaPredicted RBP9.88□□□□□ -0.83
PPARGC1A-204ENST00000506055 MTHFSP49914 203 aa9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 SAFB2Q14151 953 aaKnown RBP eCLIP9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 C8orf34Q49A92 452 aa9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 PANK1Q8TE04 598 aa9.87□□□□□ -0.83
PPARGC1A-204ENST00000506055 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms